RNA–Protein interactions for RNA: ENST00000512229.6

PCDHA4-202, Transcript of protocadherin alpha 4, humanhuman

TSL 1 (best) BASIC

Gene PCDHA4, Length 4,163 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4-202ENST00000512229 ANKRD20A2Q5SQ80 823 aa13.46□□□□□ -0.26
PCDHA4-202ENST00000512229 ANKRD20A1Q5TYW2 823 aa13.46□□□□□ -0.26
PCDHA4-202ENST00000512229 AGAP9Q5VTM2 703 aa13.46□□□□□ -0.26
PCDHA4-202ENST00000512229 APBB2Q92870 758 aa13.46□□□□□ -0.26
PCDHA4-202ENST00000512229 HIST1H2AHQ96KK5 128 aa13.46□□□□□ -0.26
PCDHA4-202ENST00000512229 HIST1H2AJQ99878 128 aa13.46□□□□□ -0.26
PCDHA4-202ENST00000512229 H2AFJQ9BTM1 129 aa13.46□□□□□ -0.26
PCDHA4-202ENST00000512229 MRPL40Q9NQ50 206 aaKnown RBP13.46□□□□□ -0.26
PCDHA4-202ENST00000512229 TBC1D13Q9NVG8 400 aa13.46□□□□□ -0.26
PCDHA4-202ENST00000512229 L3MBTL1Q9Y468 752 aa13.46□□□□□ -0.26
PCDHA4-202ENST00000512229 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.45□□□□□ -0.26
PCDHA4-202ENST00000512229 TCRBV7S2A1N4TA0A589 114 aa13.45□□□□□ -0.26
PCDHA4-202ENST00000512229 GNGT2O14610 69 aa13.45□□□□□ -0.26
PCDHA4-202ENST00000512229 KIF3CO14782 793 aa13.45□□□□□ -0.26
PCDHA4-202ENST00000512229 CHADO15335 359 aa13.45□□□□□ -0.26
PCDHA4-202ENST00000512229 CUL3Q13618 768 aa13.45□□□□□ -0.26
PCDHA4-202ENST00000512229 MAPRE2Q15555 327 aa13.45□□□□□ -0.26
PCDHA4-202ENST00000512229 PMF1Q6P1K2 205 aa13.45□□□□□ -0.26
PCDHA4-202ENST00000512229 STRADAQ7RTN6 431 aa13.45□□□□□ -0.26
PCDHA4-202ENST00000512229 PARP9Q8IXQ6 854 aa13.45□□□□□ -0.26
PCDHA4-202ENST00000512229 AGGF1Q8N302 714 aaeCLIP13.45□□□□□ -0.26
PCDHA4-202ENST00000512229 CARNMT1Q8N4J0 409 aa13.45□□□□□ -0.26
PCDHA4-202ENST00000512229 NDE1Q9NXR1 346 aa13.45□□□□□ -0.26
PCDHA4-202ENST00000512229 R3HDM2Q9Y2K5 976 aaKnown RBP13.45□□□□□ -0.26
PCDHA4-202ENST00000512229 LTBP4Q8N2S1 1624 aa13.45□□□□□ -0.26
PCDHA4-202ENST00000512229 WDR27A2RRH5 827 aa13.45□□□□□ -0.26
PCDHA4-202ENST00000512229 RGS20O76081 388 aa13.45□□□□□ -0.26
PCDHA4-202ENST00000512229 SHBGP04278 402 aa13.45□□□□□ -0.26
PCDHA4-202ENST00000512229 AVPR1AP37288 418 aa13.45□□□□□ -0.26
PCDHA4-202ENST00000512229 SERPINB4P48594 390 aa13.45□□□□□ -0.26
PCDHA4-202ENST00000512229 NPY2RP49146 381 aa13.45□□□□□ -0.26
PCDHA4-202ENST00000512229 CCL14Q16627 93 aa13.45□□□□□ -0.26
PCDHA4-202ENST00000512229 HSP90AA5PQ58FG0 334 aa13.45□□□□□ -0.26
PCDHA4-202ENST00000512229 ITIH5Q86UX2 942 aa13.45□□□□□ -0.26
PCDHA4-202ENST00000512229 TMEM192Q8IY95 271 aa13.45□□□□□ -0.26
PCDHA4-202ENST00000512229 PLEKHO2Q8TD55 490 aa13.45□□□□□ -0.26
PCDHA4-202ENST00000512229 ILKAPQ9H0C8 392 aaPredicted RBP13.45□□□□□ -0.26
PCDHA4-202ENST00000512229 STRCP1A6NGW2 1772 aa13.45□□□□□ -0.26
PCDHA4-202ENST00000512229 TRDMT1O14717 391 aaKnown RBP13.45□□□□□ -0.26
PCDHA4-202ENST00000512229 NUDT17P0C025 328 aa13.45□□□□□ -0.26
PCDHA4-202ENST00000512229 SKOR1P84550 965 aa13.45□□□□□ -0.26
PCDHA4-202ENST00000512229 SLC25A52Q3SY17 297 aa13.45□□□□□ -0.26
PCDHA4-202ENST00000512229 KBTBD12Q3ZCT8 623 aa13.45□□□□□ -0.26
PCDHA4-202ENST00000512229 ANKRD20A4Q4UJ75 823 aa13.45□□□□□ -0.26
PCDHA4-202ENST00000512229 TTMPQ5BVD1 217 aa13.45□□□□□ -0.26
PCDHA4-202ENST00000512229 SLC24A5Q71RS6 500 aa13.45□□□□□ -0.26
PCDHA4-202ENST00000512229 ZC3H3Q8IXZ2 948 aaKnown RBP13.45□□□□□ -0.26
PCDHA4-202ENST00000512229 TCP10LQ8TDR4 215 aa13.45□□□□□ -0.26
PCDHA4-202ENST00000512229 CAPNS2Q96L46 248 aa13.45□□□□□ -0.26
PCDHA4-202ENST00000512229 ATXN3LQ9H3M9 355 aa13.45□□□□□ -0.26
PCDHA4-202ENST00000512229 PCDH18Q9HCL0 1135 aa13.45□□□□□ -0.26
PCDHA4-202ENST00000512229 BTAF1O14981 1849 aa13.44□□□□□ -0.26
PCDHA4-202ENST00000512229 ERI2A8K979 691 aaKnown RBP13.44□□□□□ -0.26
PCDHA4-202ENST00000512229 CFAP99D6REC4 459 aa13.44□□□□□ -0.26
PCDHA4-202ENST00000512229 ATP4AP20648 1035 aa13.44□□□□□ -0.26
PCDHA4-202ENST00000512229 CRHR2Q13324 411 aa13.44□□□□□ -0.26
PCDHA4-202ENST00000512229 NLRP9Q7RTR0 991 aa13.44□□□□□ -0.26
PCDHA4-202ENST00000512229 SNX27Q96L92 541 aa13.44□□□□□ -0.26
PCDHA4-202ENST00000512229 FAM167BQ9BTA0 163 aa13.44□□□□□ -0.26
PCDHA4-202ENST00000512229 ENTPD7Q9NQZ7 604 aa13.44□□□□□ -0.26
PCDHA4-202ENST00000512229 MRPL42Q9Y6G3 142 aaKnown RBP13.44□□□□□ -0.26
PCDHA4-202ENST00000512229 B2RBV5 119 aa13.44□□□□□ -0.26
PCDHA4-202ENST00000512229 ZNF197O14709 1029 aa13.44□□□□□ -0.26
PCDHA4-202ENST00000512229 GRK4P32298 578 aa13.44□□□□□ -0.26
PCDHA4-202ENST00000512229 ATP5C1P36542 298 aaKnown RBP13.44□□□□□ -0.26
PCDHA4-202ENST00000512229 PTP4A2Q12974 167 aa13.44□□□□□ -0.26
PCDHA4-202ENST00000512229 AUHQ13825 339 aaKnown RBP13.44□□□□□ -0.26
PCDHA4-202ENST00000512229 HIC1Q14526 733 aa13.44□□□□□ -0.26
PCDHA4-202ENST00000512229 CES3Q6UWW8 571 aa13.44□□□□□ -0.26
PCDHA4-202ENST00000512229 IFNL1Q8IU54 200 aa13.44□□□□□ -0.26
PCDHA4-202ENST00000512229 PWWP2AQ96N64 755 aa13.44□□□□□ -0.26
PCDHA4-202ENST00000512229 HEY2Q9UBP5 337 aa13.44□□□□□ -0.26
PCDHA4-202ENST00000512229 NWD2Q9ULI1 1742 aa13.44□□□□□ -0.26
PCDHA4-202ENST00000512229 LOC100653049A0A140TA62 436 aa13.44□□□□□ -0.26
PCDHA4-202ENST00000512229 KRT34O76011 436 aa13.44□□□□□ -0.26
PCDHA4-202ENST00000512229 ACTN3Q08043 901 aaPredicted RBP13.44□□□□□ -0.26
PCDHA4-202ENST00000512229 RETSATQ6NUM9 610 aa13.44□□□□□ -0.26
PCDHA4-202ENST00000512229 ATP13A1Q9HD20 1204 aa13.44□□□□□ -0.26
PCDHA4-202ENST00000512229 CRLS1Q9UJA2 301 aa13.44□□□□□ -0.26
PCDHA4-202ENST00000512229 STXBP5LQ9Y2K9 1186 aa13.44□□□□□ -0.26
PCDHA4-202ENST00000512229 NR2E1Q9Y466 385 aa13.44□□□□□ -0.26
PCDHA4-202ENST00000512229 MYH1P12882 1939 aa13.43□□□□□ -0.26
PCDHA4-202ENST00000512229 ADCY6O43306 1168 aa13.43□□□□□ -0.26
PCDHA4-202ENST00000512229 CRTAMO95727 393 aa13.43□□□□□ -0.26
PCDHA4-202ENST00000512229 PGAM1P18669 254 aa13.43□□□□□ -0.26
PCDHA4-202ENST00000512229 CYP3A5P20815 502 aa13.43□□□□□ -0.26
PCDHA4-202ENST00000512229 GLRBP48167 497 aa13.43□□□□□ -0.26
PCDHA4-202ENST00000512229 RHOAP61586 193 aa13.43□□□□□ -0.26
PCDHA4-202ENST00000512229 FAAP100Q0VG06 881 aa13.43□□□□□ -0.26
PCDHA4-202ENST00000512229 ZNF792Q3KQV3 632 aa13.43□□□□□ -0.26
PCDHA4-202ENST00000512229 RFX8Q6ZV50 586 aa13.43□□□□□ -0.26
PCDHA4-202ENST00000512229 SLC26A9Q7LBE3 791 aa13.43□□□□□ -0.26
PCDHA4-202ENST00000512229 HERC6Q8IVU3 1022 aa13.43□□□□□ -0.26
PCDHA4-202ENST00000512229 LGI2Q8N0V4 545 aa13.43□□□□□ -0.26
PCDHA4-202ENST00000512229 NUP93Q8N1F7 819 aa13.43□□□□□ -0.26
PCDHA4-202ENST00000512229 RUVBL2Q9Y230 463 aaKnown RBP13.43□□□□□ -0.26
PCDHA4-202ENST00000512229 MYH7P12883 1935 aa13.43□□□□□ -0.26
PCDHA4-202ENST00000512229 STRCQ7RTU9 1775 aa13.43□□□□□ -0.26
PCDHA4-202ENST00000512229 FGF10O15520 208 aaPredicted RBP13.43□□□□□ -0.26
PCDHA4-202ENST00000512229 CPA3P15088 417 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms