RNA–Protein interactions for RNA: ENST00000511332.1

COL6A6-203, Transcript of collagen type VI alpha 6 chain, humanhuman

TSL 5

Gene COL6A6, Length 778 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6-203ENST00000511332 GSDMDP57764 484 aa13.33□□□□□ -0.28
COL6A6-203ENST00000511332 RPL7AP62424 266 aaKnown RBP13.33□□□□□ -0.28
COL6A6-203ENST00000511332 C15orf59Q2T9L4 293 aaPredicted RBP13.33□□□□□ -0.28
COL6A6-203ENST00000511332 GAB4Q2WGN9 574 aa13.33□□□□□ -0.28
COL6A6-203ENST00000511332 ARL13BQ3SXY8 428 aa13.33□□□□□ -0.28
COL6A6-203ENST00000511332 TMEM196Q5HYL7 178 aa13.33□□□□□ -0.28
COL6A6-203ENST00000511332 C10orf76Q5T2E6 689 aa13.33□□□□□ -0.28
COL6A6-203ENST00000511332 TTC39BQ5VTQ0 682 aaPredicted RBP13.33□□□□□ -0.28
COL6A6-203ENST00000511332 NADSYN1Q6IA69 706 aa13.33□□□□□ -0.28
COL6A6-203ENST00000511332 TXNDC11Q6PKC3 985 aa13.33□□□□□ -0.28
COL6A6-203ENST00000511332 H2AFVQ71UI9 128 aa13.33□□□□□ -0.28
COL6A6-203ENST00000511332 CHSY1Q86X52 802 aa13.33□□□□□ -0.28
COL6A6-203ENST00000511332 DNAAF5Q86Y56 855 aa13.33□□□□□ -0.28
COL6A6-203ENST00000511332 ETFBKMTQ8IXQ9 262 aa13.33□□□□□ -0.28
COL6A6-203ENST00000511332 CCDC105Q8IYK2 499 aa13.33□□□□□ -0.28
COL6A6-203ENST00000511332 ZNF557Q8N988 423 aaPredicted RBP13.33□□□□□ -0.28
COL6A6-203ENST00000511332 HJURPQ8NCD3 748 aaPredicted RBP13.33□□□□□ -0.28
COL6A6-203ENST00000511332 FNIP1Q8TF40 1166 aa13.33□□□□□ -0.28
COL6A6-203ENST00000511332 DDI1Q8WTU0 396 aa13.33□□□□□ -0.28
COL6A6-203ENST00000511332 FAM172AQ8WUF8 416 aa13.33□□□□□ -0.28
COL6A6-203ENST00000511332 CENPIQ92674 756 aaPredicted RBP13.33□□□□□ -0.28
COL6A6-203ENST00000511332 ADAM33Q9BZ11 813 aa13.33□□□□□ -0.28
COL6A6-203ENST00000511332 TKTL2Q9H0I9 626 aa13.33□□□□□ -0.28
COL6A6-203ENST00000511332 LUC7LQ9NQ29 371 aaKnown RBP13.33□□□□□ -0.28
COL6A6-203ENST00000511332 SPTLC3Q9NUV7 552 aa13.33□□□□□ -0.28
COL6A6-203ENST00000511332 ARHGEF38Q9NXL2 777 aa13.33□□□□□ -0.28
COL6A6-203ENST00000511332 NDRG2Q9UN36 371 aaKnown RBP13.33□□□□□ -0.28
COL6A6-203ENST00000511332 NYNRINQ9P2P1 1898 aaKnown RBP13.32□□□□□ -0.28
COL6A6-203ENST00000511332 TMEM191CA6NGB0 347 aa13.32□□□□□ -0.28
COL6A6-203ENST00000511332 SHISA7A6NL88 538 aa13.32□□□□□ -0.28
COL6A6-203ENST00000511332 FAM170BA6NMN3 283 aa13.32□□□□□ -0.28
COL6A6-203ENST00000511332 GFRA2O00451 464 aa13.32□□□□□ -0.28
COL6A6-203ENST00000511332 CCP110O43303 1012 aa13.32□□□□□ -0.28
COL6A6-203ENST00000511332 IPO7O95373 1038 aaKnown RBP13.32□□□□□ -0.28
COL6A6-203ENST00000511332 CYP1A2P05177 515 aa13.32□□□□□ -0.28
COL6A6-203ENST00000511332 TMEM253P0C7T8 217 aa13.32□□□□□ -0.28
COL6A6-203ENST00000511332 TACR2P21452 398 aa13.32□□□□□ -0.28
COL6A6-203ENST00000511332 PSMA2P25787 234 aa13.32□□□□□ -0.28
COL6A6-203ENST00000511332 SLC6A4P31645 630 aa13.32□□□□□ -0.28
COL6A6-203ENST00000511332 GALCP54803 685 aa13.32□□□□□ -0.28
COL6A6-203ENST00000511332 KDSRQ06136 332 aa13.32□□□□□ -0.28
COL6A6-203ENST00000511332 MS4A13Q5J8X5 152 aa13.32□□□□□ -0.28
COL6A6-203ENST00000511332 DGKKQ5KSL6 1271 aa13.32□□□□□ -0.28
COL6A6-203ENST00000511332 RABGAP1LQ5R372 815 aa13.32□□□□□ -0.28
COL6A6-203ENST00000511332 MPP7Q5T2T1 576 aa13.32□□□□□ -0.28
COL6A6-203ENST00000511332 FYB2Q5VWT5 728 aa13.32□□□□□ -0.28
COL6A6-203ENST00000511332 GRAMD4Q6IC98 578 aa13.32□□□□□ -0.28
COL6A6-203ENST00000511332 NUDT18Q6ZVK8 323 aa13.32□□□□□ -0.28
COL6A6-203ENST00000511332 FAM131BQ86XD5 332 aa13.32□□□□□ -0.28
COL6A6-203ENST00000511332 TMTC1Q8IUR5 882 aa13.32□□□□□ -0.28
COL6A6-203ENST00000511332 CCDC26Q8TAB7 109 aa13.32□□□□□ -0.28
COL6A6-203ENST00000511332 BHMTQ93088 406 aa13.32□□□□□ -0.28
COL6A6-203ENST00000511332 TMA16Q96EY4 203 aaKnown RBP13.32□□□□□ -0.28
COL6A6-203ENST00000511332 PNKPQ96T60 521 aa13.32□□□□□ -0.28
COL6A6-203ENST00000511332 NCAPGQ9BPX3 1015 aa13.32□□□□□ -0.28
COL6A6-203ENST00000511332 IER2Q9BTL4 223 aa13.32□□□□□ -0.28
COL6A6-203ENST00000511332 NUP85Q9BW27 656 aa13.32□□□□□ -0.28
COL6A6-203ENST00000511332 SLC2A11Q9BYW1 496 aa13.32□□□□□ -0.28
COL6A6-203ENST00000511332 DNAJC17Q9NVM6 304 aaKnown RBP13.32□□□□□ -0.28
COL6A6-203ENST00000511332 DEC1Q9P2X7 70 aa13.32□□□□□ -0.28
COL6A6-203ENST00000511332 UVRAGQ9P2Y5 699 aa13.32□□□□□ -0.28
COL6A6-203ENST00000511332 LCMT1Q9UIC8 334 aa13.32□□□□□ -0.28
COL6A6-203ENST00000511332 TSPAN3O60637 253 aa13.31□□□□□ -0.28
COL6A6-203ENST00000511332 TULP3O75386 442 aa13.31□□□□□ -0.28
COL6A6-203ENST00000511332 PAGE1O75459 146 aa13.31□□□□□ -0.28
COL6A6-203ENST00000511332 APODP05090 189 aa13.31□□□□□ -0.28
COL6A6-203ENST00000511332 HOXD9P28356 352 aaPredicted RBP13.31□□□□□ -0.28
COL6A6-203ENST00000511332 RPS9P46781 194 aaKnown RBP13.31□□□□□ -0.28
COL6A6-203ENST00000511332 DGKGP49619 791 aa13.31□□□□□ -0.28
COL6A6-203ENST00000511332 AIF1P55008 147 aa13.31□□□□□ -0.28
COL6A6-203ENST00000511332 HDAC4P56524 1084 aa13.31□□□□□ -0.28
COL6A6-203ENST00000511332 CCINQ13939 588 aa13.31□□□□□ -0.28
COL6A6-203ENST00000511332 SPA17Q15506 151 aa13.31□□□□□ -0.28
COL6A6-203ENST00000511332 FBXO43Q4G163 708 aa13.31□□□□□ -0.28
COL6A6-203ENST00000511332 PIK3R6Q5UE93 754 aa13.31□□□□□ -0.28
COL6A6-203ENST00000511332 RAP1GAP2Q684P5 730 aa13.31□□□□□ -0.28
COL6A6-203ENST00000511332 FSTL4Q6MZW2 842 aa13.31□□□□□ -0.28
COL6A6-203ENST00000511332 RFWD3Q6PCD5 774 aa13.31□□□□□ -0.28
COL6A6-203ENST00000511332 C12orf40Q86WS4 652 aa13.31□□□□□ -0.28
COL6A6-203ENST00000511332 CCDC117Q8IWD4 279 aaPredicted RBP13.31□□□□□ -0.28
COL6A6-203ENST00000511332 LGI2Q8N0V4 545 aa13.31□□□□□ -0.28
COL6A6-203ENST00000511332 ZNF687Q8N1G0 1237 aa13.31□□□□□ -0.28
COL6A6-203ENST00000511332 SYNPOQ8N3V7 929 aa13.31□□□□□ -0.28
COL6A6-203ENST00000511332 NAT16Q8N8M0 369 aa13.31□□□□□ -0.28
COL6A6-203ENST00000511332 ANP32BQ92688 251 aaKnown RBP13.31□□□□□ -0.28
COL6A6-203ENST00000511332 NTAN1Q96AB6 310 aa13.31□□□□□ -0.28
COL6A6-203ENST00000511332 PRICKLE1Q96MT3 831 aaPredicted RBP13.31□□□□□ -0.28
COL6A6-203ENST00000511332 HAPLN3Q96S86 360 aa13.31□□□□□ -0.28
COL6A6-203ENST00000511332 PRMT1Q99873 361 aaKnown RBP13.31□□□□□ -0.28
COL6A6-203ENST00000511332 BAG1Q99933 345 aaPredicted RBP13.31□□□□□ -0.28
COL6A6-203ENST00000511332 ARHGEF4Q9NR80 690 aa13.31□□□□□ -0.28
COL6A6-203ENST00000511332 PLK2Q9NYY3 685 aa13.31□□□□□ -0.28
COL6A6-203ENST00000511332 XPO7Q9UIA9 1087 aaKnown RBP13.31□□□□□ -0.28
COL6A6-203ENST00000511332 ANAPC7Q9UJX3 599 aa13.31□□□□□ -0.28
COL6A6-203ENST00000511332 INTUQ9ULD6 942 aa13.31□□□□□ -0.28
COL6A6-203ENST00000511332 ZNF318Q5VUA4 2279 aa13.3□□□□□ -0.28
COL6A6-203ENST00000511332 MUC22E2RYF6 1773 aaPredicted RBP13.3□□□□□ -0.28
COL6A6-203ENST00000511332 GOLGA6L7A0A1B0GV03 622 aa13.3□□□□□ -0.28
COL6A6-203ENST00000511332 TBL1XO60907 577 aa13.3□□□□□ -0.28
COL6A6-203ENST00000511332 RNF8O76064 485 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms