RNA–Protein interactions for RNA: ENST00000509468.1

KDM3B-206, Transcript of lysine demethylase 3B, humanhuman

TSL 5

Gene KDM3B, Length 576 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-206ENST00000509468 TBX4P57082 545 aa13.15□□□□□ -0.3
KDM3B-206ENST00000509468 SLC14A1Q13336 389 aa13.15□□□□□ -0.3
KDM3B-206ENST00000509468 HNRNPDQ14103 355 aaKnown RBP13.15□□□□□ -0.3
KDM3B-206ENST00000509468 TMEM215Q68D42 235 aa13.15□□□□□ -0.3
KDM3B-206ENST00000509468 CHST9Q7L1S5 443 aa13.15□□□□□ -0.3
KDM3B-206ENST00000509468 KIAA0907Q7Z7F0 614 aaPredicted RBP13.15□□□□□ -0.3
KDM3B-206ENST00000509468 SCUBE3Q8IX30 993 aa13.15□□□□□ -0.3
KDM3B-206ENST00000509468 AHI1Q8N157 1196 aa13.15□□□□□ -0.3
KDM3B-206ENST00000509468 DEFB124Q8NES8 71 aa13.15□□□□□ -0.3
KDM3B-206ENST00000509468 STK32AQ8WU08 396 aa13.15□□□□□ -0.3
KDM3B-206ENST00000509468 DNASE2BQ8WZ79 361 aa13.15□□□□□ -0.3
KDM3B-206ENST00000509468 ZSWIM1Q9BR11 485 aa13.15□□□□□ -0.3
KDM3B-206ENST00000509468 GPR174Q9BXC1 333 aa13.15□□□□□ -0.3
KDM3B-206ENST00000509468 ZDHHC5Q9C0B5 715 aa13.15□□□□□ -0.3
KDM3B-206ENST00000509468 MIS12Q9H081 205 aa13.15□□□□□ -0.3
KDM3B-206ENST00000509468 FBRSQ9HAH7 460 aa13.15□□□□□ -0.3
KDM3B-206ENST00000509468 UBE2TQ9NPD8 197 aaPredicted RBP13.15□□□□□ -0.3
KDM3B-206ENST00000509468 DNAAF2Q9NVR5 837 aaKnown RBP13.15□□□□□ -0.3
KDM3B-206ENST00000509468 SUN2Q9UH99 717 aa13.15□□□□□ -0.3
KDM3B-206ENST00000509468 CTNND2Q9UQB3 1225 aa13.15□□□□□ -0.3
KDM3B-206ENST00000509468 CKAP5Q14008 2032 aa13.14□□□□□ -0.31
KDM3B-206ENST00000509468 A0A1B0GTW7 788 aa13.14□□□□□ -0.31
KDM3B-206ENST00000509468 TYW5A2RUC4 315 aaKnown RBP13.14□□□□□ -0.31
KDM3B-206ENST00000509468 METTL12A8MUP2 240 aa13.14□□□□□ -0.31
KDM3B-206ENST00000509468 MSI1O43347 362 aaKnown RBP13.14□□□□□ -0.31
KDM3B-206ENST00000509468 ACSL4O60488 711 aa13.14□□□□□ -0.31
KDM3B-206ENST00000509468 IGLV3-19P01714 112 aa13.14□□□□□ -0.31
KDM3B-206ENST00000509468 POLR2EP19388 210 aaKnown RBP13.14□□□□□ -0.31
KDM3B-206ENST00000509468 PRKCHP24723 683 aa13.14□□□□□ -0.31
KDM3B-206ENST00000509468 GPD2P43304 727 aa13.14□□□□□ -0.31
KDM3B-206ENST00000509468 RPL34P49207 117 aaKnown RBP13.14□□□□□ -0.31
KDM3B-206ENST00000509468 COPAP53621 1224 aa13.14□□□□□ -0.31
KDM3B-206ENST00000509468 STX17P56962 302 aa13.14□□□□□ -0.31
KDM3B-206ENST00000509468 ZBTB16Q05516 673 aa13.14□□□□□ -0.31
KDM3B-206ENST00000509468 FOXC1Q12948 553 aa13.14□□□□□ -0.31
KDM3B-206ENST00000509468 CAMK2GQ13555 558 aaPredicted RBP13.14□□□□□ -0.31
KDM3B-206ENST00000509468 FNDC3BQ53EP0 1204 aaKnown RBP13.14□□□□□ -0.31
KDM3B-206ENST00000509468 PIK3R6Q5UE93 754 aa13.14□□□□□ -0.31
KDM3B-206ENST00000509468 BEND5Q7L4P6 421 aa13.14□□□□□ -0.31
KDM3B-206ENST00000509468 PIP4P1Q86T03 277 aa13.14□□□□□ -0.31
KDM3B-206ENST00000509468 ADIPOR2Q86V24 386 aa13.14□□□□□ -0.31
KDM3B-206ENST00000509468 ARHGEF19Q8IW93 802 aa13.14□□□□□ -0.31
KDM3B-206ENST00000509468 CCDC117Q8IWD4 279 aaPredicted RBP13.14□□□□□ -0.31
KDM3B-206ENST00000509468 MINDY1Q8N5J2 469 aa13.14□□□□□ -0.31
KDM3B-206ENST00000509468 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.14□□□□□ -0.31
KDM3B-206ENST00000509468 OR2T3Q8NH03 318 aa13.14□□□□□ -0.31
KDM3B-206ENST00000509468 SORCS1Q8WY21 1168 aa13.14□□□□□ -0.31
KDM3B-206ENST00000509468 KAT5Q92993 513 aa13.14□□□□□ -0.31
KDM3B-206ENST00000509468 PCED1AQ9H1Q7 454 aa13.14□□□□□ -0.31
KDM3B-206ENST00000509468 TMEM245Q9H330 911 aa13.14□□□□□ -0.31
KDM3B-206ENST00000509468 ST7Q9NRC1 585 aa13.14□□□□□ -0.31
KDM3B-206ENST00000509468 ABCB8Q9NUT2 735 aa13.14□□□□□ -0.31
KDM3B-206ENST00000509468 GGA2Q9UJY4 613 aa13.14□□□□□ -0.31
KDM3B-206ENST00000509468 ASCC3Q8N3C0 2202 aaKnown RBP13.13□□□□□ -0.31
KDM3B-206ENST00000509468 MEI4A8MW99 385 aa13.13□□□□□ -0.31
KDM3B-206ENST00000509468 KCNJ18B7U540 433 aa13.13□□□□□ -0.31
KDM3B-206ENST00000509468 CAPN9O14815 690 aa13.13□□□□□ -0.31
KDM3B-206ENST00000509468 TBL1XO60907 577 aa13.13□□□□□ -0.31
KDM3B-206ENST00000509468 GADD45BO75293 160 aaPredicted RBP13.13□□□□□ -0.31
KDM3B-206ENST00000509468 DLDP09622 509 aaKnown RBP13.13□□□□□ -0.31
KDM3B-206ENST00000509468 C7P10643 843 aa13.13□□□□□ -0.31
KDM3B-206ENST00000509468 PABPC1P11940 636 aaKnown RBP13.13□□□□□ -0.31
KDM3B-206ENST00000509468 MAOBP27338 520 aa13.13□□□□□ -0.31
KDM3B-206ENST00000509468 NNTQ13423 1086 aa13.13□□□□□ -0.31
KDM3B-206ENST00000509468 MEA1Q16626 185 aa13.13□□□□□ -0.31
KDM3B-206ENST00000509468 MBLAC2Q68D91 279 aa13.13□□□□□ -0.31
KDM3B-206ENST00000509468 SMYD5Q6GMV2 418 aa13.13□□□□□ -0.31
KDM3B-206ENST00000509468 CREBRFQ8IUR6 639 aa13.13□□□□□ -0.31
KDM3B-206ENST00000509468 FIBINQ8TAL6 211 aa13.13□□□□□ -0.31
KDM3B-206ENST00000509468 ZNF606Q8WXB4 792 aa13.13□□□□□ -0.31
KDM3B-206ENST00000509468 KREMEN1Q96MU8 473 aa13.13□□□□□ -0.31
KDM3B-206ENST00000509468 SERPINB11Q96P15 392 aa13.13□□□□□ -0.31
KDM3B-206ENST00000509468 MED15Q96RN5 788 aa13.13□□□□□ -0.31
KDM3B-206ENST00000509468 INTS2Q9H0H0 1204 aaKnown RBP13.13□□□□□ -0.31
KDM3B-206ENST00000509468 RWDD2AQ9UIY3 292 aa13.13□□□□□ -0.31
KDM3B-206ENST00000509468 TLR6Q9Y2C9 796 aa13.13□□□□□ -0.31
KDM3B-206ENST00000509468 PCNX2A6NKB5 2137 aa13.13□□□□□ -0.31
KDM3B-206ENST00000509468 PCDH15Q96QU1 1955 aa13.12□□□□□ -0.31
KDM3B-206ENST00000509468 GOLGA6L7A0A1B0GV03 622 aa13.12□□□□□ -0.31
KDM3B-206ENST00000509468 H0Y626 953 aa13.12□□□□□ -0.31
KDM3B-206ENST00000509468 LETM1O95202 739 aaPredicted RBP13.12□□□□□ -0.31
KDM3B-206ENST00000509468 TRIM16O95361 564 aa13.12□□□□□ -0.31
KDM3B-206ENST00000509468 PROS1P07225 676 aa13.12□□□□□ -0.31
KDM3B-206ENST00000509468 ST8SIA6P61647 398 aa13.12□□□□□ -0.31
KDM3B-206ENST00000509468 YWHAZP63104 245 aaKnown RBP13.12□□□□□ -0.31
KDM3B-206ENST00000509468 SFSWAPQ12872 951 aaKnown RBP13.12□□□□□ -0.31
KDM3B-206ENST00000509468 DCAF12L1Q5VU92 463 aa13.12□□□□□ -0.31
KDM3B-206ENST00000509468 RFWD3Q6PCD5 774 aa13.12□□□□□ -0.31
KDM3B-206ENST00000509468 TMEM110Q86TL2 294 aa13.12□□□□□ -0.31
KDM3B-206ENST00000509468 HJURPQ8NCD3 748 aaPredicted RBP13.12□□□□□ -0.31
KDM3B-206ENST00000509468 CLEC4CQ8WTT0 213 aa13.12□□□□□ -0.31
KDM3B-206ENST00000509468 CYB5D2Q8WUJ1 264 aa13.12□□□□□ -0.31
KDM3B-206ENST00000509468 SLC4A5Q9BY07 1137 aa13.12□□□□□ -0.31
KDM3B-206ENST00000509468 MIR1-1HGQ9H1L0 117 aa13.12□□□□□ -0.31
KDM3B-206ENST00000509468 THAP9Q9H5L6 903 aa13.12□□□□□ -0.31
KDM3B-206ENST00000509468 CD93Q9NPY3 652 aa13.12□□□□□ -0.31
KDM3B-206ENST00000509468 FSCN3Q9NQT6 498 aa13.12□□□□□ -0.31
KDM3B-206ENST00000509468 STIM2Q9P246 746 aa13.12□□□□□ -0.31
KDM3B-206ENST00000509468 KIAA1468Q9P260 1216 aa13.12□□□□□ -0.31
KDM3B-206ENST00000509468 SLC12A6Q9UHW9 1150 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms