RNA–Protein interactions for RNA: ENST00000509102.5

UBE3D-207, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 1,246 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-207ENST00000509102 PIK3R6Q5UE93 754 aa19.37■□□□□ 0.69
UBE3D-207ENST00000509102 OR6B2Q6IFH4 312 aa19.37■□□□□ 0.69
UBE3D-207ENST00000509102 RFWD3Q6PCD5 774 aa19.37■□□□□ 0.69
UBE3D-207ENST00000509102 SERPINA13PQ6UXR4 307 aa19.37■□□□□ 0.69
UBE3D-207ENST00000509102 ZDHHC17Q8IUH5 632 aa19.37■□□□□ 0.69
UBE3D-207ENST00000509102 TMEM35BQ8NCS4 154 aa19.37■□□□□ 0.69
UBE3D-207ENST00000509102 MSANTD4Q8NCY6 345 aa19.37■□□□□ 0.69
UBE3D-207ENST00000509102 C1orf131Q8NDD1 294 aaKnown RBP19.37■□□□□ 0.69
UBE3D-207ENST00000509102 ADAM32Q8TC27 787 aa19.37■□□□□ 0.69
UBE3D-207ENST00000509102 RNF34Q969K3 372 aa19.37■□□□□ 0.69
UBE3D-207ENST00000509102 FCRL2Q96LA5 508 aaPredicted RBP19.37■□□□□ 0.69
UBE3D-207ENST00000509102 CPXM1Q96SM3 734 aa19.37■□□□□ 0.69
UBE3D-207ENST00000509102 VPS16Q9H269 839 aa19.37■□□□□ 0.69
UBE3D-207ENST00000509102 TJP2Q9UDY2 1190 aa19.37■□□□□ 0.69
UBE3D-207ENST00000509102 GGA2Q9UJY4 613 aa19.37■□□□□ 0.69
UBE3D-207ENST00000509102 FHOD1Q9Y613 1164 aa19.37■□□□□ 0.69
UBE3D-207ENST00000509102 RAD54BQ9Y620 910 aa19.37■□□□□ 0.69
UBE3D-207ENST00000509102 SDK1Q7Z5N4 2213 aa19.36■□□□□ 0.69
UBE3D-207ENST00000509102 ATP5BP06576 529 aaKnown RBP19.36■□□□□ 0.69
UBE3D-207ENST00000509102 NDUFV2P19404 249 aa19.36■□□□□ 0.69
UBE3D-207ENST00000509102 BCKDHBP21953 392 aa19.36■□□□□ 0.69
UBE3D-207ENST00000509102 MYL5Q02045 173 aa19.36■□□□□ 0.69
UBE3D-207ENST00000509102 ZNF234Q14588 700 aa19.36■□□□□ 0.69
UBE3D-207ENST00000509102 SF3A2Q15428 464 aaKnown RBP19.36■□□□□ 0.69
UBE3D-207ENST00000509102 MAP7D1Q3KQU3 841 aa19.36■□□□□ 0.69
UBE3D-207ENST00000509102 PLA2G2CQ5R387 149 aa19.36■□□□□ 0.69
UBE3D-207ENST00000509102 CDKAL1Q5VV42 579 aa19.36■□□□□ 0.69
UBE3D-207ENST00000509102 SYPL2Q5VXT5 272 aa19.36■□□□□ 0.69
UBE3D-207ENST00000509102 KIAA1324Q6UXG2 1013 aaKnown RBP19.36■□□□□ 0.69
UBE3D-207ENST00000509102 MFN1Q8IWA4 741 aa19.36■□□□□ 0.69
UBE3D-207ENST00000509102 ATP6V0D2Q8N8Y2 350 aa19.36■□□□□ 0.69
UBE3D-207ENST00000509102 P2RY11Q96G91 374 aa19.36■□□□□ 0.69
UBE3D-207ENST00000509102 SLC39A13Q96H72 371 aa19.36■□□□□ 0.69
UBE3D-207ENST00000509102 BTN2A3PQ96KV6 586 aa19.36■□□□□ 0.69
UBE3D-207ENST00000509102 STK33Q9BYT3 514 aa19.36■□□□□ 0.69
UBE3D-207ENST00000509102 NAT10Q9H0A0 1025 aaKnown RBP19.36■□□□□ 0.69
UBE3D-207ENST00000509102 PLCB1Q9NQ66 1216 aa19.36■□□□□ 0.69
UBE3D-207ENST00000509102 ABCB8Q9NUT2 735 aa19.36■□□□□ 0.69
UBE3D-207ENST00000509102 SLTMQ9NWH9 1034 aaKnown RBP eCLIP19.36■□□□□ 0.69
UBE3D-207ENST00000509102 AJAP1Q9UKB5 411 aaPredicted RBP19.36■□□□□ 0.69
UBE3D-207ENST00000509102 CLEC4EQ9ULY5 219 aa19.36■□□□□ 0.69
UBE3D-207ENST00000509102 DAAM1Q9Y4D1 1078 aa19.36■□□□□ 0.69
UBE3D-207ENST00000509102 WASH3PC4AMC7 463 aa19.35■□□□□ 0.69
UBE3D-207ENST00000509102 EPHX1P07099 455 aa19.35■□□□□ 0.69
UBE3D-207ENST00000509102 PNMA6AP0CW24 399 aaPredicted RBP19.35■□□□□ 0.69
UBE3D-207ENST00000509102 PABPC1P11940 636 aaKnown RBP19.35■□□□□ 0.69
UBE3D-207ENST00000509102 CYP11B1P15538 503 aa19.35■□□□□ 0.69
UBE3D-207ENST00000509102 POLR2EP19388 210 aaKnown RBP19.35■□□□□ 0.69
UBE3D-207ENST00000509102 CDK11BP21127 795 aaKnown RBP19.35■□□□□ 0.69
UBE3D-207ENST00000509102 ABCB4P21439 1286 aa19.35■□□□□ 0.69
UBE3D-207ENST00000509102 HLA-FP30511 346 aa19.35■□□□□ 0.69
UBE3D-207ENST00000509102 IL12RB1P42701 662 aa19.35■□□□□ 0.69
UBE3D-207ENST00000509102 RPL6Q02878 288 aaKnown RBP19.35■□□□□ 0.69
UBE3D-207ENST00000509102 KCNMA1Q12791 1236 aa19.35■□□□□ 0.69
UBE3D-207ENST00000509102 CDH18Q13634 790 aa19.35■□□□□ 0.69
UBE3D-207ENST00000509102 KRT31Q15323 416 aa19.35■□□□□ 0.69
UBE3D-207ENST00000509102 FNDC3BQ53EP0 1204 aaKnown RBP19.35■□□□□ 0.69
UBE3D-207ENST00000509102 FAM133BQ5BKY9 247 aaKnown RBP19.35■□□□□ 0.69
UBE3D-207ENST00000509102 IL31Q6EBC2 164 aa19.35■□□□□ 0.69
UBE3D-207ENST00000509102 KIAA1211LQ6NV74 962 aa19.35■□□□□ 0.69
UBE3D-207ENST00000509102 CHST9Q7L1S5 443 aa19.35■□□□□ 0.69
UBE3D-207ENST00000509102 WDTC1Q8N5D0 677 aa19.35■□□□□ 0.69
UBE3D-207ENST00000509102 PCMTD1Q96MG8 357 aaPredicted RBP19.35■□□□□ 0.69
UBE3D-207ENST00000509102 PRDM16Q9HAZ2 1276 aa19.35■□□□□ 0.69
UBE3D-207ENST00000509102 FANCLQ9NW38 375 aa19.35■□□□□ 0.69
UBE3D-207ENST00000509102 DDIT4Q9NX09 232 aa19.35■□□□□ 0.69
UBE3D-207ENST00000509102 STIM2Q9P246 746 aa19.35■□□□□ 0.69
UBE3D-207ENST00000509102 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa19.34■□□□□ 0.69
UBE3D-207ENST00000509102 GOLGA6L7A0A1B0GV03 622 aa19.34■□□□□ 0.69
UBE3D-207ENST00000509102 F8VZ95 297 aa19.34■□□□□ 0.69
UBE3D-207ENST00000509102 SLC30A4O14863 429 aa19.34■□□□□ 0.69
UBE3D-207ENST00000509102 KHNYNO15037 678 aaKnown RBP19.34■□□□□ 0.69
UBE3D-207ENST00000509102 NDUFS2O75306 463 aa19.34■□□□□ 0.69
UBE3D-207ENST00000509102 SLC6A4P31645 630 aa19.34■□□□□ 0.69
UBE3D-207ENST00000509102 CCR1P32246 355 aa19.34■□□□□ 0.69
UBE3D-207ENST00000509102 ATXN1P54253 815 aaKnown RBP19.34■□□□□ 0.69
UBE3D-207ENST00000509102 ZC3H12AQ5D1E8 599 aaKnown RBP19.34■□□□□ 0.69
UBE3D-207ENST00000509102 LYSMD4Q5XG99 296 aa19.34■□□□□ 0.69
UBE3D-207ENST00000509102 FAM183BPQ6ZVS7 135 aa19.34■□□□□ 0.69
UBE3D-207ENST00000509102 CHSY1Q86X52 802 aa19.34■□□□□ 0.69
UBE3D-207ENST00000509102 TMEFF1Q8IYR6 380 aa19.34■□□□□ 0.69
UBE3D-207ENST00000509102 DEFB106AQ8N104 65 aa19.34■□□□□ 0.69
UBE3D-207ENST00000509102 DDX51Q8N8A6 666 aaKnown RBP eCLIP19.34■□□□□ 0.69
UBE3D-207ENST00000509102 DDX1Q92499 740 aaKnown RBP19.34■□□□□ 0.69
UBE3D-207ENST00000509102 PIGKQ92643 395 aa19.34■□□□□ 0.69
UBE3D-207ENST00000509102 ERLEC1Q96DZ1 483 aa19.34■□□□□ 0.69
UBE3D-207ENST00000509102 MRGPRX1Q96LB2 322 aa19.34■□□□□ 0.69
UBE3D-207ENST00000509102 SLC2A13Q96QE2 648 aa19.34■□□□□ 0.69
UBE3D-207ENST00000509102 RRN3Q9NYV6 651 aa19.34■□□□□ 0.69
UBE3D-207ENST00000509102 SYNJ2BP-COX16A0A087WUM0 186 aa19.33■□□□□ 0.68
UBE3D-207ENST00000509102 F5H5T6 163 aa19.33■□□□□ 0.68
UBE3D-207ENST00000509102 MOCS3O95396 460 aa19.33■□□□□ 0.68
UBE3D-207ENST00000509102 LSM8O95777 96 aaKnown RBP19.33■□□□□ 0.68
UBE3D-207ENST00000509102 ACADMP11310 421 aa19.33■□□□□ 0.68
UBE3D-207ENST00000509102 LIMK1P53667 647 aa19.33■□□□□ 0.68
UBE3D-207ENST00000509102 ST8SIA6P61647 398 aa19.33■□□□□ 0.68
UBE3D-207ENST00000509102 SLC6A3Q01959 620 aa19.33■□□□□ 0.68
UBE3D-207ENST00000509102 ENPP2Q13822 863 aa19.33■□□□□ 0.68
UBE3D-207ENST00000509102 TAF5Q15542 800 aa19.33■□□□□ 0.68
UBE3D-207ENST00000509102 FUT11Q495W5 492 aa19.33■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms