RNA–Protein interactions for RNA: ENST00000509043.1

HTT-205, Transcript of huntingtin, humanhuman

TSL 2

Gene HTT, Length 380 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-205ENST00000509043 SSTR1P30872 391 aa9.53□□□□□ -0.88
HTT-205ENST00000509043 MAGEA9P43362 315 aa9.53□□□□□ -0.88
HTT-205ENST00000509043 MAGEA11P43364 429 aa9.53□□□□□ -0.88
HTT-205ENST00000509043 ATXN1P54253 815 aaKnown RBP9.53□□□□□ -0.88
HTT-205ENST00000509043 YWHAGP61981 247 aaKnown RBP eCLIP9.53□□□□□ -0.88
HTT-205ENST00000509043 NRG1Q02297 640 aaPredicted RBP9.53□□□□□ -0.88
HTT-205ENST00000509043 PPIDQ08752 370 aaKnown RBP9.53□□□□□ -0.88
HTT-205ENST00000509043 SLC10A2Q12908 348 aaPredicted RBP9.53□□□□□ -0.88
HTT-205ENST00000509043 ELAVL2Q12926 359 aaKnown RBP9.53□□□□□ -0.88
HTT-205ENST00000509043 DNAJC3Q13217 504 aa9.53□□□□□ -0.88
HTT-205ENST00000509043 PPP2R5DQ14738 602 aa9.53□□□□□ -0.88
HTT-205ENST00000509043 BSPRYQ5W0U4 402 aa9.53□□□□□ -0.88
HTT-205ENST00000509043 NUGGCQ68CJ6 796 aa9.53□□□□□ -0.88
HTT-205ENST00000509043 LHX8Q68G74 356 aa9.53□□□□□ -0.88
HTT-205ENST00000509043 ITPRIPL1Q6GPH6 555 aa9.53□□□□□ -0.88
HTT-205ENST00000509043 LRRC8BQ6P9F7 803 aa9.53□□□□□ -0.88
HTT-205ENST00000509043 TRAF7Q6Q0C0 670 aa9.53□□□□□ -0.88
HTT-205ENST00000509043 BHLHA9Q7RTU4 235 aa9.53□□□□□ -0.88
HTT-205ENST00000509043 CAND1Q86VP6 1230 aaKnown RBP9.53□□□□□ -0.88
HTT-205ENST00000509043 LRRC6Q86X45 466 aa9.53□□□□□ -0.88
HTT-205ENST00000509043 LRRC34Q8IZ02 419 aa9.53□□□□□ -0.88
HTT-205ENST00000509043 GSDMBQ8TAX9 411 aa9.53□□□□□ -0.88
HTT-205ENST00000509043 CCDC110Q8TBZ0 833 aa9.53□□□□□ -0.88
HTT-205ENST00000509043 DCAKDQ8WVC6 231 aa9.53□□□□□ -0.88
HTT-205ENST00000509043 HDAC11Q96DB2 347 aa9.53□□□□□ -0.88
HTT-205ENST00000509043 C8orf48Q96LL4 319 aa9.53□□□□□ -0.88
HTT-205ENST00000509043 CEP295NLQ96MC4 621 aa9.53□□□□□ -0.88
HTT-205ENST00000509043 FAM193BQ96PV7 902 aaPredicted RBP9.53□□□□□ -0.88
HTT-205ENST00000509043 KCNK16Q96T55 309 aa9.53□□□□□ -0.88
HTT-205ENST00000509043 EBNA1BP2Q99848 306 aaKnown RBP9.53□□□□□ -0.88
HTT-205ENST00000509043 WDR83Q9BRX9 315 aaKnown RBP9.53□□□□□ -0.88
HTT-205ENST00000509043 ZCWPW1Q9H0M4 648 aa9.53□□□□□ -0.88
HTT-205ENST00000509043 FBXO44Q9H4M3 255 aa9.53□□□□□ -0.88
HTT-205ENST00000509043 MKS1Q9NXB0 559 aa9.53□□□□□ -0.88
HTT-205ENST00000509043 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.53□□□□□ -0.88
HTT-205ENST00000509043 CHMP2BQ9UQN3 213 aa9.53□□□□□ -0.88
HTT-205ENST00000509043 INPP5FQ9Y2H2 1132 aa9.53□□□□□ -0.88
HTT-205ENST00000509043 TIMM13Q9Y5L4 95 aaPredicted RBP9.53□□□□□ -0.88
HTT-205ENST00000509043 TSC2P49815 1807 aa9.53□□□□□ -0.88
HTT-205ENST00000509043 SDR42E2A6NKP2 422 aa9.52□□□□□ -0.89
HTT-205ENST00000509043 RNF103O00237 685 aa9.52□□□□□ -0.89
HTT-205ENST00000509043 PITPNM1O00562 1244 aa9.52□□□□□ -0.89
HTT-205ENST00000509043 CREB3O43889 395 aa9.52□□□□□ -0.89
HTT-205ENST00000509043 TYROBPO43914 113 aa9.52□□□□□ -0.89
HTT-205ENST00000509043 MFSD11O43934 449 aa9.52□□□□□ -0.89
HTT-205ENST00000509043 SNX3O60493 162 aa9.52□□□□□ -0.89
HTT-205ENST00000509043 KRT38O76015 456 aa9.52□□□□□ -0.89
HTT-205ENST00000509043 METTL18O95568 372 aa9.52□□□□□ -0.89
HTT-205ENST00000509043 ASMTLO95671 621 aa9.52□□□□□ -0.89
HTT-205ENST00000509043 APOEP02649 317 aa9.52□□□□□ -0.89
HTT-205ENST00000509043 MT-ND3P03897 115 aa9.52□□□□□ -0.89
HTT-205ENST00000509043 GSTA1P08263 222 aa9.52□□□□□ -0.89
HTT-205ENST00000509043 ERCC2P18074 760 aa9.52□□□□□ -0.89
HTT-205ENST00000509043 CA4P22748 312 aa9.52□□□□□ -0.89
HTT-205ENST00000509043 BDNFP23560 247 aa9.52□□□□□ -0.89
HTT-205ENST00000509043 HOXC13P31276 330 aa9.52□□□□□ -0.89
HTT-205ENST00000509043 BRCC3P46736 316 aa9.52□□□□□ -0.89
HTT-205ENST00000509043 GAD2Q05329 585 aa9.52□□□□□ -0.89
HTT-205ENST00000509043 GALNT2Q10471 571 aa9.52□□□□□ -0.89
HTT-205ENST00000509043 IFRD2Q12894 506 aaPredicted RBP9.52□□□□□ -0.89
HTT-205ENST00000509043 EIF4EBP2Q13542 120 aaPredicted RBP9.52□□□□□ -0.89
HTT-205ENST00000509043 SEPT7Q16181 437 aaKnown RBP9.52□□□□□ -0.89
HTT-205ENST00000509043 PKN2Q16513 984 aaKnown RBP9.52□□□□□ -0.89
HTT-205ENST00000509043 PDK4Q16654 411 aa9.52□□□□□ -0.89
HTT-205ENST00000509043 LACTB2Q53H82 288 aaPredicted RBP9.52□□□□□ -0.89
HTT-205ENST00000509043 TTC39BQ5VTQ0 682 aaPredicted RBP9.52□□□□□ -0.89
HTT-205ENST00000509043 STEAP4Q687X5 459 aa9.52□□□□□ -0.89
HTT-205ENST00000509043 HFE2Q6ZVN8 426 aa9.52□□□□□ -0.89
HTT-205ENST00000509043 LRRC8DQ7L1W4 858 aa9.52□□□□□ -0.89
HTT-205ENST00000509043 GPRIN1Q7Z2K8 1008 aa9.52□□□□□ -0.89
HTT-205ENST00000509043 COLGALT2Q8IYK4 626 aa9.52□□□□□ -0.89
HTT-205ENST00000509043 PYROXD2Q8N2H3 581 aa9.52□□□□□ -0.89
HTT-205ENST00000509043 ANKRD42Q8N9B4 389 aa9.52□□□□□ -0.89
HTT-205ENST00000509043 COLGALT1Q8NBJ5 622 aa9.52□□□□□ -0.89
HTT-205ENST00000509043 CD99L2Q8TCZ2 262 aa9.52□□□□□ -0.89
HTT-205ENST00000509043 C2orf15Q8WU43 125 aaKnown RBP9.52□□□□□ -0.89
HTT-205ENST00000509043 CDKL2Q92772 493 aa9.52□□□□□ -0.89
HTT-205ENST00000509043 TTC17Q96AE7 1141 aa9.52□□□□□ -0.89
HTT-205ENST00000509043 P2RY11Q96G91 374 aa9.52□□□□□ -0.89
HTT-205ENST00000509043 SIGLEC10Q96LC7 697 aa9.52□□□□□ -0.89
HTT-205ENST00000509043 TGS1Q96RS0 853 aaKnown RBP9.52□□□□□ -0.89
HTT-205ENST00000509043 PAAF1Q9BRP4 392 aa9.52□□□□□ -0.89
HTT-205ENST00000509043 MRPL9Q9BYD2 267 aaKnown RBP9.52□□□□□ -0.89
HTT-205ENST00000509043 VPS11Q9H270 941 aa9.52□□□□□ -0.89
HTT-205ENST00000509043 SMOC2Q9H3U7 446 aa9.52□□□□□ -0.89
HTT-205ENST00000509043 PRDM12Q9H4Q4 367 aa9.52□□□□□ -0.89
HTT-205ENST00000509043 ARHGEF38Q9NXL2 777 aa9.52□□□□□ -0.89
HTT-205ENST00000509043 SAGE1Q9NXZ1 904 aa9.52□□□□□ -0.89
HTT-205ENST00000509043 STARD13Q9Y3M8 1113 aa9.52□□□□□ -0.89
HTT-205ENST00000509043 USP15Q9Y4E8 981 aaPredicted RBP9.52□□□□□ -0.89
HTT-205ENST00000509043 PCDHA11Q9Y5I1 949 aa9.52□□□□□ -0.89
HTT-205ENST00000509043 MAGEB16A2A368 324 aa9.51□□□□□ -0.89
HTT-205ENST00000509043 FAM159BA6NKW6 160 aa9.51□□□□□ -0.89
HTT-205ENST00000509043 TCP11X1B4DZS4 312 aa9.51□□□□□ -0.89
HTT-205ENST00000509043 TNFRSF10BO14763 440 aa9.51□□□□□ -0.89
HTT-205ENST00000509043 IRAK2O43187 625 aa9.51□□□□□ -0.89
HTT-205ENST00000509043 FKTNO75072 461 aa9.51□□□□□ -0.89
HTT-205ENST00000509043 AOC2O75106 756 aa9.51□□□□□ -0.89
HTT-205ENST00000509043 ALDH1A2O94788 518 aa9.51□□□□□ -0.89
HTT-205ENST00000509043 FSBPO95073 299 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms