RNA–Protein interactions for RNA: ENST00000508308.1

HMGN1P16-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 16, humanhuman

BASIC

Gene HMGN1P16, Length 283 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P16-201ENST00000508308 SLC16A3O15427 465 aaKnown RBP6.72□□□□□ -1.33
HMGN1P16-201ENST00000508308 MSI1O43347 362 aaKnown RBP6.72□□□□□ -1.33
HMGN1P16-201ENST00000508308 SH3BP5O60239 455 aa6.72□□□□□ -1.33
HMGN1P16-201ENST00000508308 TSPAN3O60637 253 aa6.72□□□□□ -1.33
HMGN1P16-201ENST00000508308 CBFA2T3O75081 653 aa6.72□□□□□ -1.33
HMGN1P16-201ENST00000508308 IGLV3-27P01718 113 aa6.72□□□□□ -1.33
HMGN1P16-201ENST00000508308 FYNP06241 537 aa6.72□□□□□ -1.33
HMGN1P16-201ENST00000508308 EPB41P11171 864 aaKnown RBP6.72□□□□□ -1.33
HMGN1P16-201ENST00000508308 NCAM1P13591 858 aa6.72□□□□□ -1.33
HMGN1P16-201ENST00000508308 HLA-EP13747 358 aa6.72□□□□□ -1.33
HMGN1P16-201ENST00000508308 DPP6P42658 865 aa6.72□□□□□ -1.33
HMGN1P16-201ENST00000508308 DAOAP59103 153 aa6.72□□□□□ -1.33
HMGN1P16-201ENST00000508308 SIM1P81133 766 aaPredicted RBP6.72□□□□□ -1.33
HMGN1P16-201ENST00000508308 ADIGQ0VDE8 80 aa6.72□□□□□ -1.33
HMGN1P16-201ENST00000508308 LRMPQ12912 555 aa6.72□□□□□ -1.33
HMGN1P16-201ENST00000508308 CAMK2GQ13555 558 aaPredicted RBP6.72□□□□□ -1.33
HMGN1P16-201ENST00000508308 PTPRNQ16849 979 aa6.72□□□□□ -1.33
HMGN1P16-201ENST00000508308 FAM133BQ5BKY9 247 aaKnown RBP6.72□□□□□ -1.33
HMGN1P16-201ENST00000508308 BSPRYQ5W0U4 402 aa6.72□□□□□ -1.33
HMGN1P16-201ENST00000508308 PMF1Q6P1K2 205 aa6.72□□□□□ -1.33
HMGN1P16-201ENST00000508308 LCLAT1Q6UWP7 414 aa6.72□□□□□ -1.33
HMGN1P16-201ENST00000508308 KIAA1324Q6UXG2 1013 aaKnown RBP6.72□□□□□ -1.33
HMGN1P16-201ENST00000508308 TADA2BQ86TJ2 420 aa6.72□□□□□ -1.33
HMGN1P16-201ENST00000508308 TMPRSS6Q8IU80 811 aa6.72□□□□□ -1.33
HMGN1P16-201ENST00000508308 FMNL3Q8IVF7 1028 aa6.72□□□□□ -1.33
HMGN1P16-201ENST00000508308 ARHGAP18Q8N392 663 aa6.72□□□□□ -1.33
HMGN1P16-201ENST00000508308 ZNF366Q8N895 744 aa6.72□□□□□ -1.33
HMGN1P16-201ENST00000508308 CCDC150Q8NCX0 1101 aa6.72□□□□□ -1.33
HMGN1P16-201ENST00000508308 WFDC5Q8TCV5 224 aa6.72□□□□□ -1.33
HMGN1P16-201ENST00000508308 CLEC4CQ8WTT0 213 aa6.72□□□□□ -1.33
HMGN1P16-201ENST00000508308 SLC35F5Q8WV83 523 aa6.72□□□□□ -1.33
HMGN1P16-201ENST00000508308 KCTD13Q8WZ19 329 aa6.72□□□□□ -1.33
HMGN1P16-201ENST00000508308 CCDC47Q96A33 483 aaKnown RBP6.72□□□□□ -1.33
HMGN1P16-201ENST00000508308 PLD4Q96BZ4 506 aa6.72□□□□□ -1.33
HMGN1P16-201ENST00000508308 MYEOVQ96EZ4 313 aa6.72□□□□□ -1.33
HMGN1P16-201ENST00000508308 CDK5RAP1Q96SZ6 601 aaKnown RBP6.72□□□□□ -1.33
HMGN1P16-201ENST00000508308 GPR174Q9BXC1 333 aa6.72□□□□□ -1.33
HMGN1P16-201ENST00000508308 SLC2A11Q9BYW1 496 aa6.72□□□□□ -1.33
HMGN1P16-201ENST00000508308 TMEM245Q9H330 911 aa6.72□□□□□ -1.33
HMGN1P16-201ENST00000508308 IL21RQ9HBE5 538 aa6.72□□□□□ -1.33
HMGN1P16-201ENST00000508308 ACACAQ13085 2346 aa6.72□□□□□ -1.33
HMGN1P16-201ENST00000508308 PTPRBP23467 1997 aa6.71□□□□□ -1.33
HMGN1P16-201ENST00000508308 TMEM131Q92545 1883 aa6.71□□□□□ -1.34
HMGN1P16-201ENST00000508308 METTL12A8MUP2 240 aa6.71□□□□□ -1.34
HMGN1P16-201ENST00000508308 PPP1R3GB7ZBB8 358 aa6.71□□□□□ -1.34
HMGN1P16-201ENST00000508308 TAF4O00268 1085 aa6.71□□□□□ -1.34
HMGN1P16-201ENST00000508308 PIK3R2O00459 728 aa6.71□□□□□ -1.34
HMGN1P16-201ENST00000508308 NPC1O15118 1278 aa6.71□□□□□ -1.34
HMGN1P16-201ENST00000508308 PMM2O15305 246 aa6.71□□□□□ -1.34
HMGN1P16-201ENST00000508308 ST8SIA5O15466 376 aa6.71□□□□□ -1.34
HMGN1P16-201ENST00000508308 STX10O60499 249 aa6.71□□□□□ -1.34
HMGN1P16-201ENST00000508308 OPHN1O60890 802 aa6.71□□□□□ -1.34
HMGN1P16-201ENST00000508308 NDUFS2O75306 463 aa6.71□□□□□ -1.34
HMGN1P16-201ENST00000508308 EPHX1P07099 455 aa6.71□□□□□ -1.34
HMGN1P16-201ENST00000508308 VDRP11473 427 aa6.71□□□□□ -1.34
HMGN1P16-201ENST00000508308 CD19P15391 556 aa6.71□□□□□ -1.34
HMGN1P16-201ENST00000508308 TRIM21P19474 475 aaKnown RBP6.71□□□□□ -1.34
HMGN1P16-201ENST00000508308 SLC6A4P31645 630 aa6.71□□□□□ -1.34
HMGN1P16-201ENST00000508308 FMO5P49326 533 aa6.71□□□□□ -1.34
HMGN1P16-201ENST00000508308 RGS7P49802 495 aa6.71□□□□□ -1.34
HMGN1P16-201ENST00000508308 ZNF132P52740 706 aa6.71□□□□□ -1.34
HMGN1P16-201ENST00000508308 BCAT1P54687 386 aa6.71□□□□□ -1.34
HMGN1P16-201ENST00000508308 PRR20EP86478 221 aa6.71□□□□□ -1.34
HMGN1P16-201ENST00000508308 PRR20CP86479 221 aa6.71□□□□□ -1.34
HMGN1P16-201ENST00000508308 PRR20DP86480 221 aa6.71□□□□□ -1.34
HMGN1P16-201ENST00000508308 PRR20BP86481 221 aa6.71□□□□□ -1.34
HMGN1P16-201ENST00000508308 PRR20AP86496 221 aa6.71□□□□□ -1.34
HMGN1P16-201ENST00000508308 FKBP3Q00688 224 aaKnown RBP6.71□□□□□ -1.34
HMGN1P16-201ENST00000508308 BST2Q10589 180 aaKnown RBP6.71□□□□□ -1.34
HMGN1P16-201ENST00000508308 GRIK2Q13002 908 aa6.71□□□□□ -1.34
HMGN1P16-201ENST00000508308 EIF4HQ15056 248 aaKnown RBP6.71□□□□□ -1.34
HMGN1P16-201ENST00000508308 PROX2Q3B8N5 592 aa6.71□□□□□ -1.34
HMGN1P16-201ENST00000508308 PLEKHG6Q3KR16 790 aa6.71□□□□□ -1.34
HMGN1P16-201ENST00000508308 SGO2Q562F6 1265 aa6.71□□□□□ -1.34
HMGN1P16-201ENST00000508308 DCAF17Q5H9S7 520 aaPredicted RBP6.71□□□□□ -1.34
HMGN1P16-201ENST00000508308 ADGRF1Q5T601 910 aa6.71□□□□□ -1.34
HMGN1P16-201ENST00000508308 DCAF12L1Q5VU92 463 aa6.71□□□□□ -1.34
HMGN1P16-201ENST00000508308 TCERG1LQ5VWI1 586 aa6.71□□□□□ -1.34
HMGN1P16-201ENST00000508308 ISM2Q6H9L7 571 aa6.71□□□□□ -1.34
HMGN1P16-201ENST00000508308 NADSYN1Q6IA69 706 aa6.71□□□□□ -1.34
HMGN1P16-201ENST00000508308 TTI2Q6NXR4 508 aa6.71□□□□□ -1.34
HMGN1P16-201ENST00000508308 MSANTD2Q6P1R3 559 aa6.71□□□□□ -1.34
HMGN1P16-201ENST00000508308 RFWD3Q6PCD5 774 aa6.71□□□□□ -1.34
HMGN1P16-201ENST00000508308 RSRC2Q7L4I2 434 aaKnown RBP6.71□□□□□ -1.34
HMGN1P16-201ENST00000508308 ANKS1BQ7Z6G8 1248 aa6.71□□□□□ -1.34
HMGN1P16-201ENST00000508308 RAB44Q7Z6P3 723 aaPredicted RBP6.71□□□□□ -1.34
HMGN1P16-201ENST00000508308 CACUL1Q86Y37 369 aa6.71□□□□□ -1.34
HMGN1P16-201ENST00000508308 ARHGEF19Q8IW93 802 aa6.71□□□□□ -1.34
HMGN1P16-201ENST00000508308 SCML4Q8N228 414 aa6.71□□□□□ -1.34
HMGN1P16-201ENST00000508308 CHCHD4Q8N4Q1 142 aa6.71□□□□□ -1.34
HMGN1P16-201ENST00000508308 ZCCHC9Q8N567 271 aaKnown RBP6.71□□□□□ -1.34
HMGN1P16-201ENST00000508308 DDX51Q8N8A6 666 aaKnown RBP eCLIP6.71□□□□□ -1.34
HMGN1P16-201ENST00000508308 CADM4Q8NFZ8 388 aa6.71□□□□□ -1.34
HMGN1P16-201ENST00000508308 DDI1Q8WTU0 396 aa6.71□□□□□ -1.34
HMGN1P16-201ENST00000508308 CYB5D2Q8WUJ1 264 aa6.71□□□□□ -1.34
HMGN1P16-201ENST00000508308 FOXJ1Q92949 421 aa6.71□□□□□ -1.34
HMGN1P16-201ENST00000508308 SIPA1Q96FS4 1042 aa6.71□□□□□ -1.34
HMGN1P16-201ENST00000508308 MYO19Q96H55 970 aa6.71□□□□□ -1.34
HMGN1P16-201ENST00000508308 GSDMAQ96QA5 445 aa6.71□□□□□ -1.34
HMGN1P16-201ENST00000508308 ORAI3Q9BRQ5 295 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms