RNA–Protein interactions for RNA: ENST00000508274.5

RAB28-205, Transcript of RAB28, member RAS oncogene family, humanhuman

TSL 1 (best)

Gene RAB28, Length 1,551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28-205ENST00000508274 PITX1P78337 314 aaPredicted RBP14.85□□□□□ -0.03
RAB28-205ENST00000508274 MEA1Q16626 185 aa14.85□□□□□ -0.03
RAB28-205ENST00000508274 PIK3R6Q5UE93 754 aa14.85□□□□□ -0.03
RAB28-205ENST00000508274 SLC36A4Q6YBV0 504 aa14.85□□□□□ -0.03
RAB28-205ENST00000508274 SYT12Q8IV01 421 aa14.85□□□□□ -0.03
RAB28-205ENST00000508274 PASD1Q8IV76 773 aa14.85□□□□□ -0.03
RAB28-205ENST00000508274 UNC45BQ8IWX7 931 aa14.85□□□□□ -0.03
RAB28-205ENST00000508274 ZNF366Q8N895 744 aa14.85□□□□□ -0.03
RAB28-205ENST00000508274 STK32AQ8WU08 396 aa14.85□□□□□ -0.03
RAB28-205ENST00000508274 NUP62CLQ9H1M0 184 aa14.85□□□□□ -0.03
RAB28-205ENST00000508274 XPO7Q9UIA9 1087 aaKnown RBP14.85□□□□□ -0.03
RAB28-205ENST00000508274 PILRBQ9UKJ0 227 aa14.85□□□□□ -0.03
RAB28-205ENST00000508274 NPC1O15118 1278 aa14.84□□□□□ -0.03
RAB28-205ENST00000508274 MOCS2O96007 188 aaPredicted RBP14.84□□□□□ -0.03
RAB28-205ENST00000508274 PABPC1P11940 636 aaKnown RBP14.84□□□□□ -0.03
RAB28-205ENST00000508274 CD70P32970 193 aa14.84□□□□□ -0.03
RAB28-205ENST00000508274 SLC11A2P49281 568 aa14.84□□□□□ -0.03
RAB28-205ENST00000508274 COPAP53621 1224 aa14.84□□□□□ -0.03
RAB28-205ENST00000508274 ZNF33AQ06730 810 aa14.84□□□□□ -0.03
RAB28-205ENST00000508274 PDCLQ13371 301 aa14.84□□□□□ -0.03
RAB28-205ENST00000508274 NUMA1Q14980 2115 aa14.84□□□□□ -0.03
RAB28-205ENST00000508274 TAF5Q15542 800 aa14.84□□□□□ -0.03
RAB28-205ENST00000508274 MAN2A1Q16706 1144 aa14.84□□□□□ -0.03
RAB28-205ENST00000508274 MIIPQ5JXC2 388 aa14.84□□□□□ -0.03
RAB28-205ENST00000508274 SPDYCQ5MJ68 293 aa14.84□□□□□ -0.03
RAB28-205ENST00000508274 PEAR1Q5VY43 1037 aaPredicted RBP14.84□□□□□ -0.03
RAB28-205ENST00000508274 SERPINA13PQ6UXR4 307 aa14.84□□□□□ -0.03
RAB28-205ENST00000508274 CHST9Q7L1S5 443 aa14.84□□□□□ -0.03
RAB28-205ENST00000508274 TMEM110Q86TL2 294 aa14.84□□□□□ -0.03
RAB28-205ENST00000508274 ADIPOR2Q86V24 386 aa14.84□□□□□ -0.03
RAB28-205ENST00000508274 WDTC1Q8N5D0 677 aa14.84□□□□□ -0.03
RAB28-205ENST00000508274 DDX1Q92499 740 aaKnown RBP14.84□□□□□ -0.03
RAB28-205ENST00000508274 SLC39A13Q96H72 371 aa14.84□□□□□ -0.03
RAB28-205ENST00000508274 HSPA12BQ96MM6 686 aa14.84□□□□□ -0.03
RAB28-205ENST00000508274 SERPINB11Q96P15 392 aa14.84□□□□□ -0.03
RAB28-205ENST00000508274 CPXM1Q96SM3 734 aa14.84□□□□□ -0.03
RAB28-205ENST00000508274 LSM14BQ9BX40 385 aaKnown RBP14.84□□□□□ -0.03
RAB28-205ENST00000508274 NUCKS1Q9H1E3 243 aaKnown RBP14.84□□□□□ -0.03
RAB28-205ENST00000508274 PRDM16Q9HAZ2 1276 aa14.84□□□□□ -0.03
RAB28-205ENST00000508274 STIM2Q9P246 746 aa14.84□□□□□ -0.03
RAB28-205ENST00000508274 EVLQ9UI08 416 aaPredicted RBP14.84□□□□□ -0.03
RAB28-205ENST00000508274 GGA2Q9UJY4 613 aa14.84□□□□□ -0.03
RAB28-205ENST00000508274 TLR6Q9Y2C9 796 aa14.84□□□□□ -0.03
RAB28-205ENST00000508274 PCDH15Q96QU1 1955 aa14.84□□□□□ -0.03
RAB28-205ENST00000508274 SPEGQ15772 3267 aa14.83□□□□□ -0.03
RAB28-205ENST00000508274 KCNJ18B7U540 433 aa14.83□□□□□ -0.04
RAB28-205ENST00000508274 SART1O43290 800 aaKnown RBP14.83□□□□□ -0.04
RAB28-205ENST00000508274 EPHX1P07099 455 aa14.83□□□□□ -0.04
RAB28-205ENST00000508274 PRKCSHP14314 528 aaPredicted RBP14.83□□□□□ -0.04
RAB28-205ENST00000508274 RPS24P62847 133 aaKnown RBP14.83□□□□□ -0.04
RAB28-205ENST00000508274 ARID5AQ03989 594 aa14.83□□□□□ -0.04
RAB28-205ENST00000508274 PTPRNQ16849 979 aa14.83□□□□□ -0.04
RAB28-205ENST00000508274 KIAA0907Q7Z7F0 614 aaPredicted RBP14.83□□□□□ -0.04
RAB28-205ENST00000508274 DDX51Q8N8A6 666 aaKnown RBP eCLIP14.83□□□□□ -0.04
RAB28-205ENST00000508274 FAM81BQ96LP2 452 aa14.83□□□□□ -0.04
RAB28-205ENST00000508274 TMEM9BQ9NQ34 198 aa14.83□□□□□ -0.04
RAB28-205ENST00000508274 USP36Q9P275 1121 aaKnown RBP14.83□□□□□ -0.04
RAB28-205ENST00000508274 DNAJC12Q9UKB3 198 aa14.83□□□□□ -0.04
RAB28-205ENST00000508274 TPRP12270 2363 aaKnown RBP14.82□□□□□ -0.04
RAB28-205ENST00000508274 CAPN9O14815 690 aa14.82□□□□□ -0.04
RAB28-205ENST00000508274 IRAK2O43187 625 aa14.82□□□□□ -0.04
RAB28-205ENST00000508274 SYNCRIPO60506 623 aaKnown RBP14.82□□□□□ -0.04
RAB28-205ENST00000508274 CFIP05156 583 aa14.82□□□□□ -0.04
RAB28-205ENST00000508274 ANP32AP39687 249 aaKnown RBP14.82□□□□□ -0.04
RAB28-205ENST00000508274 FNDC3BQ53EP0 1204 aaKnown RBP14.82□□□□□ -0.04
RAB28-205ENST00000508274 MBLAC2Q68D91 279 aa14.82□□□□□ -0.04
RAB28-205ENST00000508274 DPY19L2P1Q6NXN4 242 aa14.82□□□□□ -0.04
RAB28-205ENST00000508274 SLC47A2Q86VL8 602 aa14.82□□□□□ -0.04
RAB28-205ENST00000508274 TMPRSS6Q8IU80 811 aa14.82□□□□□ -0.04
RAB28-205ENST00000508274 AHI1Q8N157 1196 aa14.82□□□□□ -0.04
RAB28-205ENST00000508274 C1orf131Q8NDD1 294 aaKnown RBP14.82□□□□□ -0.04
RAB28-205ENST00000508274 WFIKKN2Q8TEU8 576 aa14.82□□□□□ -0.04
RAB28-205ENST00000508274 TUBGCP2Q9BSJ2 902 aa14.82□□□□□ -0.04
RAB28-205ENST00000508274 NUSAP1Q9BXS6 441 aaKnown RBP14.82□□□□□ -0.04
RAB28-205ENST00000508274 NDST4Q9H3R1 872 aa14.82□□□□□ -0.04
RAB28-205ENST00000508274 POPDC2Q9HBU9 364 aa14.82□□□□□ -0.04
RAB28-205ENST00000508274 SAMSN1Q9NSI8 373 aaKnown RBP14.82□□□□□ -0.04
RAB28-205ENST00000508274 LMBRD1Q9NUN5 540 aa14.82□□□□□ -0.04
RAB28-205ENST00000508274 FAM170AA1A519 330 aa14.81□□□□□ -0.04
RAB28-205ENST00000508274 FOXN3O00409 490 aaPredicted RBP14.81□□□□□ -0.04
RAB28-205ENST00000508274 TIMM44O43615 452 aa14.81□□□□□ -0.04
RAB28-205ENST00000508274 NDUFS2O75306 463 aa14.81□□□□□ -0.04
RAB28-205ENST00000508274 TRUB2O95900 331 aaKnown RBP14.81□□□□□ -0.04
RAB28-205ENST00000508274 IGLV3-25P01717 112 aa14.81□□□□□ -0.04
RAB28-205ENST00000508274 ENGP17813 658 aa14.81□□□□□ -0.04
RAB28-205ENST00000508274 ERCC5P28715 1186 aaPredicted RBP14.81□□□□□ -0.04
RAB28-205ENST00000508274 CD6P30203 668 aa14.81□□□□□ -0.04
RAB28-205ENST00000508274 CLCN1P35523 988 aa14.81□□□□□ -0.04
RAB28-205ENST00000508274 MAPK8P45983 427 aa14.81□□□□□ -0.04
RAB28-205ENST00000508274 YWHAZP63104 245 aaKnown RBP14.81□□□□□ -0.04
RAB28-205ENST00000508274 LMAN2Q12907 356 aa14.81□□□□□ -0.04
RAB28-205ENST00000508274 NNTQ13423 1086 aa14.81□□□□□ -0.04
RAB28-205ENST00000508274 VWA3BQ502W6 1294 aa14.81□□□□□ -0.04
RAB28-205ENST00000508274 ZC3H12AQ5D1E8 599 aaKnown RBP14.81□□□□□ -0.04
RAB28-205ENST00000508274 MPP7Q5T2T1 576 aa14.81□□□□□ -0.04
RAB28-205ENST00000508274 N4BP2L1Q5TBK1 243 aaPredicted RBP14.81□□□□□ -0.04
RAB28-205ENST00000508274 PSAPL1Q6NUJ1 521 aa14.81□□□□□ -0.04
RAB28-205ENST00000508274 SLC23A3Q6PIS1 610 aa14.81□□□□□ -0.04
RAB28-205ENST00000508274 BEND5Q7L4P6 421 aa14.81□□□□□ -0.04
RAB28-205ENST00000508274 MFN1Q8IWA4 741 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms