RNA–Protein interactions for RNA: ENST00000506874.1

SNX2-205, Transcript of sorting nexin 2, humanhuman

TSL 3

Gene SNX2, Length 200 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX2-205ENST00000506874 ARMCX3Q9UH62 379 aaPredicted RBP16.95■□□□□ 0.3
SNX2-205ENST00000506874 EIF2B4Q9UI10 523 aaKnown RBP16.95■□□□□ 0.3
SNX2-205ENST00000506874 XPO1O14980 1071 aaKnown RBP16.94■□□□□ 0.3
SNX2-205ENST00000506874 MSI1O43347 362 aaKnown RBP16.94■□□□□ 0.3
SNX2-205ENST00000506874 HOXD9P28356 352 aaPredicted RBP16.94■□□□□ 0.3
SNX2-205ENST00000506874 BST2Q10589 180 aaKnown RBP16.94■□□□□ 0.3
SNX2-205ENST00000506874 SLC14A1Q13336 389 aa16.94■□□□□ 0.3
SNX2-205ENST00000506874 HNRNPDQ14103 355 aaKnown RBP16.94■□□□□ 0.3
SNX2-205ENST00000506874 EIF4HQ15056 248 aaKnown RBP16.94■□□□□ 0.3
SNX2-205ENST00000506874 E2F5Q15329 346 aa16.94■□□□□ 0.3
SNX2-205ENST00000506874 TRIP4Q15650 581 aaPredicted RBP16.94■□□□□ 0.3
SNX2-205ENST00000506874 ZNF423Q2M1K9 1284 aa16.94■□□□□ 0.3
SNX2-205ENST00000506874 FNDC3BQ53EP0 1204 aaKnown RBP16.94■□□□□ 0.3
SNX2-205ENST00000506874 MPPE1Q53F39 396 aa16.94■□□□□ 0.3
SNX2-205ENST00000506874 BSPRYQ5W0U4 402 aa16.94■□□□□ 0.3
SNX2-205ENST00000506874 FAM217AQ8IXS0 508 aa16.94■□□□□ 0.3
SNX2-205ENST00000506874 SIX6OS1Q8N1H7 587 aa16.94■□□□□ 0.3
SNX2-205ENST00000506874 PNPLA1Q8N8W4 532 aa16.94■□□□□ 0.3
SNX2-205ENST00000506874 MLKLQ8NB16 471 aa16.94■□□□□ 0.3
SNX2-205ENST00000506874 RBBP8NLQ8NC74 664 aaPredicted RBP16.94■□□□□ 0.3
SNX2-205ENST00000506874 CADM4Q8NFZ8 388 aa16.94■□□□□ 0.3
SNX2-205ENST00000506874 SNX19Q92543 992 aa16.94■□□□□ 0.3
SNX2-205ENST00000506874 NUP58Q9BVL2 599 aa16.94■□□□□ 0.3
SNX2-205ENST00000506874 IL21RQ9HBE5 538 aa16.94■□□□□ 0.3
SNX2-205ENST00000506874 OLA1Q9NTK5 396 aaKnown RBP16.94■□□□□ 0.3
SNX2-205ENST00000506874 RWDD2AQ9UIY3 292 aa16.94■□□□□ 0.3
SNX2-205ENST00000506874 YJEFN3A6XGL0 299 aa16.93■□□□□ 0.3
SNX2-205ENST00000506874 METTL12A8MUP2 240 aa16.93■□□□□ 0.3
SNX2-205ENST00000506874 E7ENQ6 273 aa16.93■□□□□ 0.3
SNX2-205ENST00000506874 PIK3R2O00459 728 aa16.93■□□□□ 0.3
SNX2-205ENST00000506874 BCAT2O15382 392 aaPredicted RBP16.93■□□□□ 0.3
SNX2-205ENST00000506874 TIMM44O43615 452 aa16.93■□□□□ 0.3
SNX2-205ENST00000506874 MBD3O95983 291 aa16.93■□□□□ 0.3
SNX2-205ENST00000506874 FTH1P19P0C7X4 201 aa16.93■□□□□ 0.3
SNX2-205ENST00000506874 LCP1P13796 627 aa16.93■□□□□ 0.3
SNX2-205ENST00000506874 CCDC40Q4G0X9 1142 aa16.93■□□□□ 0.3
SNX2-205ENST00000506874 CHST9Q7L1S5 443 aa16.93■□□□□ 0.3
SNX2-205ENST00000506874 RAB44Q7Z6P3 723 aaPredicted RBP16.93■□□□□ 0.3
SNX2-205ENST00000506874 SETD7Q8WTS6 366 aaKnown RBP16.93■□□□□ 0.3
SNX2-205ENST00000506874 TMA16Q96EY4 203 aaKnown RBP16.93■□□□□ 0.3
SNX2-205ENST00000506874 MED15Q96RN5 788 aa16.93■□□□□ 0.3
SNX2-205ENST00000506874 SRRTQ9BXP5 876 aaKnown RBP16.93■□□□□ 0.3
SNX2-205ENST00000506874 ZDHHC5Q9C0B5 715 aa16.93■□□□□ 0.3
SNX2-205ENST00000506874 GAREM1Q9H706 876 aa16.93■□□□□ 0.3
SNX2-205ENST00000506874 METTL14Q9HCE5 456 aaKnown RBP16.93■□□□□ 0.3
SNX2-205ENST00000506874 HBS1LQ9Y450 684 aaKnown RBP16.93■□□□□ 0.3
SNX2-205ENST00000506874 HLA-FP30511 346 aa16.92■□□□□ 0.3
SNX2-205ENST00000506874 RGS7P49802 495 aa16.92■□□□□ 0.3
SNX2-205ENST00000506874 YWHAEP62258 255 aaKnown RBP16.92■□□□□ 0.3
SNX2-205ENST00000506874 DPCR1Q3MIW9 517 aa16.92■□□□□ 0.3
SNX2-205ENST00000506874 OR2T3Q8NH03 318 aa16.92■□□□□ 0.3
SNX2-205ENST00000506874 SLC35C1Q96A29 364 aa16.92■□□□□ 0.3
SNX2-205ENST00000506874 LHX5Q9H2C1 402 aa16.92■□□□□ 0.3
SNX2-205ENST00000506874 ABCB8Q9NUT2 735 aa16.92■□□□□ 0.3
SNX2-205ENST00000506874 PLA2G4CQ9UP65 541 aa16.92■□□□□ 0.3
SNX2-205ENST00000506874 COQ4Q9Y3A0 265 aa16.92■□□□□ 0.3
SNX2-205ENST00000506874 NFE2L3Q9Y4A8 694 aa16.92■□□□□ 0.3
SNX2-205ENST00000506874 DMXL2Q8TDJ6 3036 aa16.91■□□□□ 0.3
SNX2-205ENST00000506874 VDRP11473 427 aa16.91■□□□□ 0.3
SNX2-205ENST00000506874 SGSHP51688 502 aa16.91■□□□□ 0.3
SNX2-205ENST00000506874 BNC1Q01954 994 aa16.91■□□□□ 0.3
SNX2-205ENST00000506874 ADGRF1Q5T601 910 aa16.91■□□□□ 0.3
SNX2-205ENST00000506874 WFIKKN2Q8TEU8 576 aa16.91■□□□□ 0.3
SNX2-205ENST00000506874 C6orf106Q9H6K1 298 aaPredicted RBP16.91■□□□□ 0.3
SNX2-205ENST00000506874 ABCC13Q9NSE7 274 aa16.91■□□□□ 0.3
SNX2-205ENST00000506874 FNDC3AQ9Y2H6 1198 aaKnown RBP16.91■□□□□ 0.3
SNX2-205ENST00000506874 SLCO1B1Q9Y6L6 691 aa16.91■□□□□ 0.3
SNX2-205ENST00000506874 SPEGQ15772 3267 aa16.91■□□□□ 0.3
SNX2-205ENST00000506874 GOLGA4Q13439 2230 aaKnown RBP16.9■□□□□ 0.3
SNX2-205ENST00000506874 ANKRD11Q6UB99 2663 aaPredicted RBP16.9■□□□□ 0.3
SNX2-205ENST00000506874 GOLGA6L7A0A1B0GV03 622 aa16.9■□□□□ 0.3
SNX2-205ENST00000506874 A0A1B0GVT2 93 aa16.9■□□□□ 0.3
SNX2-205ENST00000506874 O00370 1275 aa16.9■□□□□ 0.3
SNX2-205ENST00000506874 CER1O95813 267 aa16.9■□□□□ 0.3
SNX2-205ENST00000506874 CALCAP01258 141 aa16.9■□□□□ 0.3
SNX2-205ENST00000506874 IGLV3-19P01714 112 aa16.9■□□□□ 0.3
SNX2-205ENST00000506874 SETSIPP0DME0 302 aa16.9■□□□□ 0.3
SNX2-205ENST00000506874 PABPC1P11940 636 aaKnown RBP16.9■□□□□ 0.3
SNX2-205ENST00000506874 ACSL1P33121 698 aa16.9■□□□□ 0.3
SNX2-205ENST00000506874 MATKP42679 507 aa16.9■□□□□ 0.3
SNX2-205ENST00000506874 CSNK1EP49674 416 aaKnown RBP16.9■□□□□ 0.3
SNX2-205ENST00000506874 DAOAP59103 153 aa16.9■□□□□ 0.3
SNX2-205ENST00000506874 CAMK2GQ13555 558 aaPredicted RBP16.9■□□□□ 0.3
SNX2-205ENST00000506874 HLA-BQ31612 363 aa16.9■□□□□ 0.3
SNX2-205ENST00000506874 MBLAC2Q68D91 279 aa16.9■□□□□ 0.3
SNX2-205ENST00000506874 RFWD3Q6PCD5 774 aa16.9■□□□□ 0.3
SNX2-205ENST00000506874 TMEM270Q6UE05 265 aa16.9■□□□□ 0.3
SNX2-205ENST00000506874 RBM43Q6ZSC3 357 aaKnown RBP16.9■□□□□ 0.3
SNX2-205ENST00000506874 UBR7Q8N806 425 aa16.9■□□□□ 0.3
SNX2-205ENST00000506874 WFDC5Q8TCV5 224 aa16.9■□□□□ 0.3
SNX2-205ENST00000506874 ADAMTS14Q8WXS8 1223 aa16.9■□□□□ 0.3
SNX2-205ENST00000506874 KCTD13Q8WZ19 329 aa16.9■□□□□ 0.3
SNX2-205ENST00000506874 TFAP2BQ92481 460 aa16.9■□□□□ 0.3
SNX2-205ENST00000506874 CNGB3Q9NQW8 809 aa16.9■□□□□ 0.3
SNX2-205ENST00000506874 TM7SF3Q9NS93 570 aa16.9■□□□□ 0.3
SNX2-205ENST00000506874 GGA2Q9UJY4 613 aa16.9■□□□□ 0.3
SNX2-205ENST00000506874 PCDHB4Q9Y5E5 795 aa16.9■□□□□ 0.3
SNX2-205ENST00000506874 WDFY3Q8IZQ1 3526 aa16.9■□□□□ 0.3
SNX2-205ENST00000506874 ATRXP46100 2492 aa16.9■□□□□ 0.3
SNX2-205ENST00000506874 DSPP15924 2871 aaKnown RBP16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms