RNA–Protein interactions for RNA: ENST00000506632.2

PDLIM5-209, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 907 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-209ENST00000506632 POPDC2Q9HBU9 364 aa9.44□□□□□ -0.9
PDLIM5-209ENST00000506632 ST7Q9NRC1 585 aa9.44□□□□□ -0.9
PDLIM5-209ENST00000506632 SAMSN1Q9NSI8 373 aaKnown RBP9.44□□□□□ -0.9
PDLIM5-209ENST00000506632 ELOVL2Q9NXB9 296 aa9.44□□□□□ -0.9
PDLIM5-209ENST00000506632 TJP2Q9UDY2 1190 aa9.44□□□□□ -0.9
PDLIM5-209ENST00000506632 NAALADL1Q9UQQ1 740 aa9.44□□□□□ -0.9
PDLIM5-209ENST00000506632 TLR6Q9Y2C9 796 aa9.44□□□□□ -0.9
PDLIM5-209ENST00000506632 RAD54BQ9Y620 910 aa9.44□□□□□ -0.9
PDLIM5-209ENST00000506632 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa9.43□□□□□ -0.9
PDLIM5-209ENST00000506632 GOLGA6L7A0A1B0GV03 622 aa9.43□□□□□ -0.9
PDLIM5-209ENST00000506632 LNP1A1A4G5 178 aa9.43□□□□□ -0.9
PDLIM5-209ENST00000506632 KCNJ18B7U540 433 aa9.43□□□□□ -0.9
PDLIM5-209ENST00000506632 FOXN3O00409 490 aaPredicted RBP9.43□□□□□ -0.9
PDLIM5-209ENST00000506632 IRAK2O43187 625 aa9.43□□□□□ -0.9
PDLIM5-209ENST00000506632 TIMM44O43615 452 aa9.43□□□□□ -0.9
PDLIM5-209ENST00000506632 ZNF217O75362 1048 aa9.43□□□□□ -0.9
PDLIM5-209ENST00000506632 USP8P40818 1118 aa9.43□□□□□ -0.9
PDLIM5-209ENST00000506632 PTGER3P43115 390 aa9.43□□□□□ -0.9
PDLIM5-209ENST00000506632 SLC11A2P49281 568 aa9.43□□□□□ -0.9
PDLIM5-209ENST00000506632 DHPSP49366 369 aaPredicted RBP9.43□□□□□ -0.9
PDLIM5-209ENST00000506632 YWHAZP63104 245 aaKnown RBP9.43□□□□□ -0.9
PDLIM5-209ENST00000506632 PITX1P78337 314 aaPredicted RBP9.43□□□□□ -0.9
PDLIM5-209ENST00000506632 KCNJ12Q14500 433 aa9.43□□□□□ -0.9
PDLIM5-209ENST00000506632 ZNF234Q14588 700 aa9.43□□□□□ -0.9
PDLIM5-209ENST00000506632 E2F5Q15329 346 aa9.43□□□□□ -0.9
PDLIM5-209ENST00000506632 FUT11Q495W5 492 aa9.43□□□□□ -0.9
PDLIM5-209ENST00000506632 PPP1R15BQ5SWA1 713 aa9.43□□□□□ -0.9
PDLIM5-209ENST00000506632 RFWD3Q6PCD5 774 aa9.43□□□□□ -0.9
PDLIM5-209ENST00000506632 CYP2U1Q7Z449 544 aa9.43□□□□□ -0.9
PDLIM5-209ENST00000506632 ADIPOR2Q86V24 386 aa9.43□□□□□ -0.9
PDLIM5-209ENST00000506632 TMEFF1Q8IYR6 380 aa9.43□□□□□ -0.9
PDLIM5-209ENST00000506632 FAM71AQ8IYT1 594 aa9.43□□□□□ -0.9
PDLIM5-209ENST00000506632 PGBD3Q8N328 593 aa9.43□□□□□ -0.9
PDLIM5-209ENST00000506632 ENOX1Q8TC92 643 aaKnown RBP9.43□□□□□ -0.9
PDLIM5-209ENST00000506632 WFDC5Q8TCV5 224 aa9.43□□□□□ -0.9
PDLIM5-209ENST00000506632 GPT2Q8TD30 523 aa9.43□□□□□ -0.9
PDLIM5-209ENST00000506632 SORCS1Q8WY21 1168 aa9.43□□□□□ -0.9
PDLIM5-209ENST00000506632 MYEOVQ96EZ4 313 aa9.43□□□□□ -0.9
PDLIM5-209ENST00000506632 PRICKLE1Q96MT3 831 aaPredicted RBP9.43□□□□□ -0.9
PDLIM5-209ENST00000506632 CPXM1Q96SM3 734 aa9.43□□□□□ -0.9
PDLIM5-209ENST00000506632 TRIM62Q9BVG3 475 aa9.43□□□□□ -0.9
PDLIM5-209ENST00000506632 NAA15Q9BXJ9 866 aaKnown RBP9.43□□□□□ -0.9
PDLIM5-209ENST00000506632 MKRN2Q9H000 416 aaKnown RBP9.43□□□□□ -0.9
PDLIM5-209ENST00000506632 ASNSD1Q9NWL6 643 aa9.43□□□□□ -0.9
PDLIM5-209ENST00000506632 EVLQ9UI08 416 aaPredicted RBP9.43□□□□□ -0.9
PDLIM5-209ENST00000506632 DNAJC12Q9UKB3 198 aa9.43□□□□□ -0.9
PDLIM5-209ENST00000506632 PATE3B3GLJ2 98 aa9.42□□□□□ -0.9
PDLIM5-209ENST00000506632 AP5Z1O43299 807 aa9.42□□□□□ -0.9
PDLIM5-209ENST00000506632 TBL1XO60907 577 aa9.42□□□□□ -0.9
PDLIM5-209ENST00000506632 TRUB2O95900 331 aaKnown RBP9.42□□□□□ -0.9
PDLIM5-209ENST00000506632 GLI1P08151 1106 aa9.42□□□□□ -0.9
PDLIM5-209ENST00000506632 PNMA6AP0CW24 399 aaPredicted RBP9.42□□□□□ -0.9
PDLIM5-209ENST00000506632 PABPC1P11940 636 aaKnown RBP9.42□□□□□ -0.9
PDLIM5-209ENST00000506632 PRKCHP24723 683 aa9.42□□□□□ -0.9
PDLIM5-209ENST00000506632 EEF1GP26641 437 aaKnown RBP9.42□□□□□ -0.9
PDLIM5-209ENST00000506632 HOXD12P35452 270 aa9.42□□□□□ -0.9
PDLIM5-209ENST00000506632 PI4KAP42356 2102 aa9.42□□□□□ -0.9
PDLIM5-209ENST00000506632 COPAP53621 1224 aa9.42□□□□□ -0.9
PDLIM5-209ENST00000506632 PTK2Q05397 1052 aa9.42□□□□□ -0.9
PDLIM5-209ENST00000506632 STARD3Q14849 445 aa9.42□□□□□ -0.9
PDLIM5-209ENST00000506632 TAF5Q15542 800 aa9.42□□□□□ -0.9
PDLIM5-209ENST00000506632 PTPN20Q4JDL3 420 aa9.42□□□□□ -0.9
PDLIM5-209ENST00000506632 HSP90AA4PQ58FG1 418 aa9.42□□□□□ -0.9
PDLIM5-209ENST00000506632 TCP11X2Q5H9J9 407 aa9.42□□□□□ -0.9
PDLIM5-209ENST00000506632 MS4A13Q5J8X5 152 aa9.42□□□□□ -0.9
PDLIM5-209ENST00000506632 STPG1Q5TH74 334 aa9.42□□□□□ -0.9
PDLIM5-209ENST00000506632 KLHDC7AQ5VTJ3 777 aa9.42□□□□□ -0.9
PDLIM5-209ENST00000506632 CDKAL1Q5VV42 579 aa9.42□□□□□ -0.9
PDLIM5-209ENST00000506632 OLFML1Q6UWY5 402 aa9.42□□□□□ -0.9
PDLIM5-209ENST00000506632 SLC36A4Q6YBV0 504 aa9.42□□□□□ -0.9
PDLIM5-209ENST00000506632 CHST9Q7L1S5 443 aa9.42□□□□□ -0.9
PDLIM5-209ENST00000506632 SLC47A2Q86VL8 602 aa9.42□□□□□ -0.9
PDLIM5-209ENST00000506632 SYT12Q8IV01 421 aa9.42□□□□□ -0.9
PDLIM5-209ENST00000506632 C1orf131Q8NDD1 294 aaKnown RBP9.42□□□□□ -0.9
PDLIM5-209ENST00000506632 FIBINQ8TAL6 211 aa9.42□□□□□ -0.9
PDLIM5-209ENST00000506632 ADAM32Q8TC27 787 aa9.42□□□□□ -0.9
PDLIM5-209ENST00000506632 PPP1R13BQ96KQ4 1090 aa9.42□□□□□ -0.9
PDLIM5-209ENST00000506632 SLC2A13Q96QE2 648 aa9.42□□□□□ -0.9
PDLIM5-209ENST00000506632 CIPCQ9C0C6 399 aa9.42□□□□□ -0.9
PDLIM5-209ENST00000506632 NUCKS1Q9H1E3 243 aaKnown RBP9.42□□□□□ -0.9
PDLIM5-209ENST00000506632 SLC6A17Q9H1V8 727 aa9.42□□□□□ -0.9
PDLIM5-209ENST00000506632 TMEM245Q9H330 911 aa9.42□□□□□ -0.9
PDLIM5-209ENST00000506632 CD93Q9NPY3 652 aa9.42□□□□□ -0.9
PDLIM5-209ENST00000506632 TMEM74BQ9NUR3 256 aa9.42□□□□□ -0.9
PDLIM5-209ENST00000506632 ABCB8Q9NUT2 735 aa9.42□□□□□ -0.9
PDLIM5-209ENST00000506632 USP36Q9P275 1121 aaKnown RBP9.42□□□□□ -0.9
PDLIM5-209ENST00000506632 XPO7Q9UIA9 1087 aaKnown RBP9.42□□□□□ -0.9
PDLIM5-209ENST00000506632 GGA2Q9UJY4 613 aa9.42□□□□□ -0.9
PDLIM5-209ENST00000506632 PILRBQ9UKJ0 227 aa9.42□□□□□ -0.9
PDLIM5-209ENST00000506632 CYP8B1Q9UNU6 501 aa9.42□□□□□ -0.9
PDLIM5-209ENST00000506632 NFE2L3Q9Y4A8 694 aa9.42□□□□□ -0.9
PDLIM5-209ENST00000506632 FHOD1Q9Y613 1164 aa9.42□□□□□ -0.9
PDLIM5-209ENST00000506632 CEP192Q8TEP8 1941 aa9.42□□□□□ -0.9
PDLIM5-209ENST00000506632 TPRP12270 2363 aaKnown RBP9.41□□□□□ -0.9
PDLIM5-209ENST00000506632 CACNA1EQ15878 2313 aa9.41□□□□□ -0.9
PDLIM5-209ENST00000506632 CDX4O14627 284 aaPredicted RBP9.41□□□□□ -0.9
PDLIM5-209ENST00000506632 CAPN9O14815 690 aa9.41□□□□□ -0.9
PDLIM5-209ENST00000506632 KHNYNO15037 678 aaKnown RBP9.41□□□□□ -0.9
PDLIM5-209ENST00000506632 ZBTB24O43167 697 aaPredicted RBP9.41□□□□□ -0.9
PDLIM5-209ENST00000506632 IGLV3-19P01714 112 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms