RNA–Protein interactions for RNA: ENST00000505615.1

VCAN-206, Transcript of versican, humanhuman

TSL 5

Gene VCAN, Length 810 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-206ENST00000505615 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP7.41□□□□□ -1.22
VCAN-206ENST00000505615 NUP58Q9BVL2 599 aa7.41□□□□□ -1.22
VCAN-206ENST00000505615 GDPD2Q9HCC8 539 aa7.41□□□□□ -1.22
VCAN-206ENST00000505615 PRM3Q9NNZ6 103 aa7.41□□□□□ -1.22
VCAN-206ENST00000505615 CRTAC1Q9NQ79 661 aa7.41□□□□□ -1.22
VCAN-206ENST00000505615 TPSG1Q9NRR2 321 aa7.41□□□□□ -1.22
VCAN-206ENST00000505615 MARK1Q9P0L2 795 aa7.41□□□□□ -1.22
VCAN-206ENST00000505615 THAP10Q9P2Z0 257 aaPredicted RBP7.41□□□□□ -1.22
VCAN-206ENST00000505615 DNM3Q9UQ16 869 aa7.41□□□□□ -1.22
VCAN-206ENST00000505615 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.4□□□□□ -1.22
VCAN-206ENST00000505615 ELOA3CA0A087WX78 387 aaPredicted RBP7.4□□□□□ -1.22
VCAN-206ENST00000505615 NPHP3-ACAD11A0A0J9YXS1 232 aa7.4□□□□□ -1.22
VCAN-206ENST00000505615 ELOA3DA6NLF2 546 aaPredicted RBP7.4□□□□□ -1.22
VCAN-206ENST00000505615 TMEM229AB2RXF0 380 aa7.4□□□□□ -1.22
VCAN-206ENST00000505615 ANKRD63C9JTQ0 380 aa7.4□□□□□ -1.22
VCAN-206ENST00000505615 NEDD8-MDP1E9PL57 170 aa7.4□□□□□ -1.22
VCAN-206ENST00000505615 F8VP50 259 aa7.4□□□□□ -1.22
VCAN-206ENST00000505615 K7ENP7 123 aa7.4□□□□□ -1.22
VCAN-206ENST00000505615 HUS1O60921 280 aa7.4□□□□□ -1.22
VCAN-206ENST00000505615 TYRP14679 529 aa7.4□□□□□ -1.22
VCAN-206ENST00000505615 GLDCP23378 1020 aa7.4□□□□□ -1.22
VCAN-206ENST00000505615 PCSK1P29120 753 aa7.4□□□□□ -1.22
VCAN-206ENST00000505615 ACSL1P33121 698 aa7.4□□□□□ -1.22
VCAN-206ENST00000505615 PNPLA4P41247 253 aa7.4□□□□□ -1.22
VCAN-206ENST00000505615 CACNA2D1P54289 1103 aa7.4□□□□□ -1.22
VCAN-206ENST00000505615 PSMC1P62191 440 aaKnown RBP7.4□□□□□ -1.22
VCAN-206ENST00000505615 NFKB2Q00653 900 aa7.4□□□□□ -1.22
VCAN-206ENST00000505615 ORC2Q13416 577 aaPredicted RBP7.4□□□□□ -1.22
VCAN-206ENST00000505615 STARD3Q14849 445 aa7.4□□□□□ -1.22
VCAN-206ENST00000505615 ELOA3BQ3SY89 546 aa7.4□□□□□ -1.22
VCAN-206ENST00000505615 ARSJQ5FYB0 599 aaPredicted RBP7.4□□□□□ -1.22
VCAN-206ENST00000505615 INO80CQ6PI98 192 aaPredicted RBP7.4□□□□□ -1.22
VCAN-206ENST00000505615 ZNF574Q6ZN55 896 aaPredicted RBP7.4□□□□□ -1.22
VCAN-206ENST00000505615 C4orf50Q6ZRC1 276 aa7.4□□□□□ -1.22
VCAN-206ENST00000505615 FAM124AQ86V42 546 aa7.4□□□□□ -1.22
VCAN-206ENST00000505615 CACUL1Q86Y37 369 aa7.4□□□□□ -1.22
VCAN-206ENST00000505615 ADGRF2Q8IZF7 708 aa7.4□□□□□ -1.22
VCAN-206ENST00000505615 ELOA3Q8NG57 546 aa7.4□□□□□ -1.22
VCAN-206ENST00000505615 SAP25Q8TEE9 199 aa7.4□□□□□ -1.22
VCAN-206ENST00000505615 KBTBD7Q8WVZ9 684 aa7.4□□□□□ -1.22
VCAN-206ENST00000505615 WASF1Q92558 559 aa7.4□□□□□ -1.22
VCAN-206ENST00000505615 MRRFQ96E11 262 aaKnown RBP7.4□□□□□ -1.22
VCAN-206ENST00000505615 SPATA32Q96LK8 384 aa7.4□□□□□ -1.22
VCAN-206ENST00000505615 C8orf48Q96LL4 319 aa7.4□□□□□ -1.22
VCAN-206ENST00000505615 FIZ1Q96SL8 496 aa7.4□□□□□ -1.22
VCAN-206ENST00000505615 SYT15Q9BQS2 421 aa7.4□□□□□ -1.22
VCAN-206ENST00000505615 VRTNQ9H8Y1 702 aa7.4□□□□□ -1.22
VCAN-206ENST00000505615 ASCL3Q9NQ33 180 aa7.4□□□□□ -1.22
VCAN-206ENST00000505615 GDAP2Q9NXN4 497 aa7.4□□□□□ -1.22
VCAN-206ENST00000505615 MAGEC2Q9UBF1 373 aaPredicted RBP7.4□□□□□ -1.22
VCAN-206ENST00000505615 FBXO10Q9UK96 956 aa7.4□□□□□ -1.22
VCAN-206ENST00000505615 PCDHB1Q9Y5F3 818 aa7.4□□□□□ -1.22
VCAN-206ENST00000505615 CYP46A1Q9Y6A2 500 aa7.4□□□□□ -1.22
VCAN-206ENST00000505615 NYNRINQ9P2P1 1898 aaKnown RBP7.4□□□□□ -1.23
VCAN-206ENST00000505615 CLEC18AA5D8T8 446 aa7.39□□□□□ -1.23
VCAN-206ENST00000505615 LAD1O00515 517 aa7.39□□□□□ -1.23
VCAN-206ENST00000505615 KLK10O43240 276 aa7.39□□□□□ -1.23
VCAN-206ENST00000505615 DYRK3O43781 588 aa7.39□□□□□ -1.23
VCAN-206ENST00000505615 DFNA5O60443 496 aa7.39□□□□□ -1.23
VCAN-206ENST00000505615 TSPAN3O60637 253 aa7.39□□□□□ -1.23
VCAN-206ENST00000505615 KRT38O76015 456 aa7.39□□□□□ -1.23
VCAN-206ENST00000505615 ABL1P00519 1130 aa7.39□□□□□ -1.23
VCAN-206ENST00000505615 WNT1P04628 370 aa7.39□□□□□ -1.23
VCAN-206ENST00000505615 ACO1P21399 889 aaKnown RBP7.39□□□□□ -1.23
VCAN-206ENST00000505615 PRKCHP24723 683 aa7.39□□□□□ -1.23
VCAN-206ENST00000505615 LMO2P25791 158 aa7.39□□□□□ -1.23
VCAN-206ENST00000505615 ANXA13P27216 316 aa7.39□□□□□ -1.23
VCAN-206ENST00000505615 LHX1P48742 406 aa7.39□□□□□ -1.23
VCAN-206ENST00000505615 ZNF132P52740 706 aa7.39□□□□□ -1.23
VCAN-206ENST00000505615 SLC12A3P55017 1021 aa7.39□□□□□ -1.23
VCAN-206ENST00000505615 POU5F1Q01860 360 aaKnown RBP7.39□□□□□ -1.23
VCAN-206ENST00000505615 ILKQ13418 452 aa7.39□□□□□ -1.23
VCAN-206ENST00000505615 SOWAHAQ2M3V2 549 aa7.39□□□□□ -1.23
VCAN-206ENST00000505615 PRAMEF14Q5SWL7 426 aa7.39□□□□□ -1.23
VCAN-206ENST00000505615 CLEC18BQ6UXF7 455 aa7.39□□□□□ -1.23
VCAN-206ENST00000505615 KANSL1Q7Z3B3 1105 aa7.39□□□□□ -1.23
VCAN-206ENST00000505615 EID2Q8N6I1 236 aa7.39□□□□□ -1.23
VCAN-206ENST00000505615 TOP6BLQ8N6T0 577 aa7.39□□□□□ -1.23
VCAN-206ENST00000505615 LRRC52Q8N7C0 313 aa7.39□□□□□ -1.23
VCAN-206ENST00000505615 RBBP8NLQ8NC74 664 aaPredicted RBP7.39□□□□□ -1.23
VCAN-206ENST00000505615 CLEC18CQ8NCF0 446 aa7.39□□□□□ -1.23
VCAN-206ENST00000505615 KCNE4Q8WWG9 221 aa7.39□□□□□ -1.23
VCAN-206ENST00000505615 PRCCQ92733 491 aaPredicted RBP7.39□□□□□ -1.23
VCAN-206ENST00000505615 BIRC7Q96CA5 298 aa7.39□□□□□ -1.23
VCAN-206ENST00000505615 PCED1BQ96HM7 432 aa7.39□□□□□ -1.23
VCAN-206ENST00000505615 XPO6Q96QU8 1125 aaKnown RBP7.39□□□□□ -1.23
VCAN-206ENST00000505615 ELF4Q99607 663 aaPredicted RBP7.39□□□□□ -1.23
VCAN-206ENST00000505615 BBS2Q9BXC9 721 aa7.39□□□□□ -1.23
VCAN-206ENST00000505615 TM6SF1Q9BZW5 370 aa7.39□□□□□ -1.23
VCAN-206ENST00000505615 CCSER2Q9H7U1 834 aa7.39□□□□□ -1.23
VCAN-206ENST00000505615 STARD5Q9NSY2 213 aa7.39□□□□□ -1.23
VCAN-206ENST00000505615 KCNK4Q9NYG8 393 aa7.39□□□□□ -1.23
VCAN-206ENST00000505615 HSPBP1Q9NZL4 362 aa7.39□□□□□ -1.23
VCAN-206ENST00000505615 SIX4Q9UIU6 781 aa7.39□□□□□ -1.23
VCAN-206ENST00000505615 AGAP1Q9UPQ3 857 aa7.39□□□□□ -1.23
VCAN-206ENST00000505615 CLCA2Q9UQC9 943 aa7.39□□□□□ -1.23
VCAN-206ENST00000505615 SH3BP1Q9Y3L3 701 aa7.39□□□□□ -1.23
VCAN-206ENST00000505615 NME7Q9Y5B8 376 aa7.39□□□□□ -1.23
VCAN-206ENST00000505615 HEMK1Q9Y5R4 338 aaPredicted RBP7.39□□□□□ -1.23
VCAN-206ENST00000505615 SNX9Q9Y5X1 595 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms