RNA–Protein interactions for RNA: ENST00000505450.5

PROM1-206, Transcript of prominin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PROM1, Length 4,349 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-206ENST00000505450 SIN3BO75182 1162 aa8.21□□□□□ -1.1
PROM1-206ENST00000505450 COX4I1P13073 169 aa8.21□□□□□ -1.1
PROM1-206ENST00000505450 FDFT1P37268 417 aa8.21□□□□□ -1.1
PROM1-206ENST00000505450 DCTN2Q13561 401 aaKnown RBP8.21□□□□□ -1.1
PROM1-206ENST00000505450 TCEAL1Q15170 157 aa8.21□□□□□ -1.1
PROM1-206ENST00000505450 PPM1JQ5JR12 505 aa8.21□□□□□ -1.1
PROM1-206ENST00000505450 C6orf52Q5T4I8 152 aa8.21□□□□□ -1.1
PROM1-206ENST00000505450 C16orf89Q6UX73 402 aa8.21□□□□□ -1.1
PROM1-206ENST00000505450 CMC1Q7Z7K0 106 aa8.21□□□□□ -1.1
PROM1-206ENST00000505450 CCDC60Q8IWA6 550 aaPredicted RBP8.21□□□□□ -1.1
PROM1-206ENST00000505450 UNC5BQ8IZJ1 945 aa8.21□□□□□ -1.1
PROM1-206ENST00000505450 CATSPER1Q8NEC5 780 aa8.21□□□□□ -1.1
PROM1-206ENST00000505450 TFAP2BQ92481 460 aa8.21□□□□□ -1.1
PROM1-206ENST00000505450 UPF3AQ9H1J1 476 aaKnown RBP8.21□□□□□ -1.1
PROM1-206ENST00000505450 WDR55Q9H6Y2 383 aaPredicted RBP8.21□□□□□ -1.1
PROM1-206ENST00000505450 BFARQ9NZS9 450 aa8.21□□□□□ -1.1
PROM1-206ENST00000505450 ZNF536O15090 1300 aa8.21□□□□□ -1.1
PROM1-206ENST00000505450 CNTNAP2Q9UHC6 1331 aa8.21□□□□□ -1.1
PROM1-206ENST00000505450 ATP6V1G1O75348 118 aa8.21□□□□□ -1.1
PROM1-206ENST00000505450 TNFAIP8O95379 198 aa8.21□□□□□ -1.1
PROM1-206ENST00000505450 C4BPAP04003 597 aaKnown RBP8.21□□□□□ -1.1
PROM1-206ENST00000505450 F7P08709 466 aaPredicted RBP8.21□□□□□ -1.1
PROM1-206ENST00000505450 ERVK-10P10266 1014 aa8.21□□□□□ -1.1
PROM1-206ENST00000505450 THRAP10827 490 aa8.21□□□□□ -1.1
PROM1-206ENST00000505450 NOVP48745 357 aa8.21□□□□□ -1.1
PROM1-206ENST00000505450 PDK1Q15118 436 aa8.21□□□□□ -1.1
PROM1-206ENST00000505450 ZC3H12AQ5D1E8 599 aaKnown RBP8.21□□□□□ -1.1
PROM1-206ENST00000505450 SLC39A4Q6P5W5 647 aa8.21□□□□□ -1.1
PROM1-206ENST00000505450 LRRC8BQ6P9F7 803 aa8.21□□□□□ -1.1
PROM1-206ENST00000505450 AAGABQ6PD74 315 aa8.21□□□□□ -1.1
PROM1-206ENST00000505450 PQLC1Q8N2U9 271 aa8.21□□□□□ -1.1
PROM1-206ENST00000505450 KYQ8NBH2 561 aa8.21□□□□□ -1.1
PROM1-206ENST00000505450 OLIG1Q8TAK6 271 aa8.21□□□□□ -1.1
PROM1-206ENST00000505450 FAM172AQ8WUF8 416 aa8.21□□□□□ -1.1
PROM1-206ENST00000505450 FAM136AQ96C01 138 aa8.21□□□□□ -1.1
PROM1-206ENST00000505450 DCUN1D1Q96GG9 259 aa8.21□□□□□ -1.1
PROM1-206ENST00000505450 PAIP1Q9H074 479 aaKnown RBP8.21□□□□□ -1.1
PROM1-206ENST00000505450 VPS33BQ9H267 617 aa8.21□□□□□ -1.1
PROM1-206ENST00000505450 COMMD10Q9Y6G5 202 aa8.21□□□□□ -1.1
PROM1-206ENST00000505450 ADAMTS7Q9UKP4 1686 aa8.21□□□□□ -1.1
PROM1-206ENST00000505450 LSM8O95777 96 aaKnown RBP8.2□□□□□ -1.1
PROM1-206ENST00000505450 ITGB3P05106 788 aa8.2□□□□□ -1.1
PROM1-206ENST00000505450 CSH1P0DML2 217 aa8.2□□□□□ -1.1
PROM1-206ENST00000505450 CSH2P0DML3 217 aa8.2□□□□□ -1.1
PROM1-206ENST00000505450 LCP1P13796 627 aa8.2□□□□□ -1.1
PROM1-206ENST00000505450 SYN1P17600 705 aa8.2□□□□□ -1.1
PROM1-206ENST00000505450 MGAT1P26572 445 aa8.2□□□□□ -1.1
PROM1-206ENST00000505450 AVPR1AP37288 418 aa8.2□□□□□ -1.1
PROM1-206ENST00000505450 CAP2P40123 477 aa8.2□□□□□ -1.1
PROM1-206ENST00000505450 RAP1GDS1P52306 607 aa8.2□□□□□ -1.1
PROM1-206ENST00000505450 YWHAZP63104 245 aaKnown RBP8.2□□□□□ -1.1
PROM1-206ENST00000505450 PLOD1Q02809 727 aaPredicted RBP8.2□□□□□ -1.1
PROM1-206ENST00000505450 WASHC5Q12768 1159 aa8.2□□□□□ -1.1
PROM1-206ENST00000505450 TATDN1Q6P1N9 297 aa8.2□□□□□ -1.1
PROM1-206ENST00000505450 UNC5AQ6ZN44 842 aa8.2□□□□□ -1.1
PROM1-206ENST00000505450 KDELC2Q7Z4H8 507 aa8.2□□□□□ -1.1
PROM1-206ENST00000505450 AMIGO2Q86SJ2 522 aa8.2□□□□□ -1.1
PROM1-206ENST00000505450 RNF180Q86T96 592 aa8.2□□□□□ -1.1
PROM1-206ENST00000505450 PCDH20Q8N6Y1 951 aaKnown RBP8.2□□□□□ -1.1
PROM1-206ENST00000505450 BHLHE22Q8NFJ8 381 aaPredicted RBP8.2□□□□□ -1.1
PROM1-206ENST00000505450 C7orf26Q96N11 449 aa8.2□□□□□ -1.1
PROM1-206ENST00000505450 TMEM79Q9BSE2 394 aa8.2□□□□□ -1.1
PROM1-206ENST00000505450 IDI2Q9BXS1 227 aa8.2□□□□□ -1.1
PROM1-206ENST00000505450 ILKAPQ9H0C8 392 aaPredicted RBP8.2□□□□□ -1.1
PROM1-206ENST00000505450 SSU72Q9NP77 194 aaKnown RBP8.2□□□□□ -1.1
PROM1-206ENST00000505450 DNAAF2Q9NVR5 837 aaKnown RBP8.2□□□□□ -1.1
PROM1-206ENST00000505450 TMCO1Q9UM00 188 aa8.2□□□□□ -1.1
PROM1-206ENST00000505450 SIGLEC16A6NMB1 481 aa8.2□□□□□ -1.1
PROM1-206ENST00000505450 ZNF862O60290 1169 aa8.2□□□□□ -1.1
PROM1-206ENST00000505450 ADORA2BP29275 332 aa8.2□□□□□ -1.1
PROM1-206ENST00000505450 EPHA3P29320 983 aa8.2□□□□□ -1.1
PROM1-206ENST00000505450 FKBP1BP68106 108 aa8.2□□□□□ -1.1
PROM1-206ENST00000505450 SURF1Q15526 300 aa8.2□□□□□ -1.1
PROM1-206ENST00000505450 SH3PXD2AQ5TCZ1 1133 aa8.2□□□□□ -1.1
PROM1-206ENST00000505450 CLVS1Q8IUQ0 354 aaPredicted RBP8.2□□□□□ -1.1
PROM1-206ENST00000505450 RELL1Q8IUW5 271 aa8.2□□□□□ -1.1
PROM1-206ENST00000505450 RYBPQ8N488 228 aaPredicted RBP8.2□□□□□ -1.1
PROM1-206ENST00000505450 AFAP1L2Q8N4X5 818 aa8.2□□□□□ -1.1
PROM1-206ENST00000505450 TDRD5Q8NAT2 981 aaKnown RBP8.2□□□□□ -1.1
PROM1-206ENST00000505450 FAM156AQ8NDB6 213 aa8.2□□□□□ -1.1
PROM1-206ENST00000505450 CNPY3Q9BT09 278 aa8.2□□□□□ -1.1
PROM1-206ENST00000505450 TSPYL2Q9H2G4 693 aaPredicted RBP8.2□□□□□ -1.1
PROM1-206ENST00000505450 MRPL46Q9H2W6 279 aaKnown RBP8.2□□□□□ -1.1
PROM1-206ENST00000505450 TLE6Q9H808 572 aa8.2□□□□□ -1.1
PROM1-206ENST00000505450 ZNF358Q9NW07 568 aa8.2□□□□□ -1.1
PROM1-206ENST00000505450 TDRKHQ9Y2W6 561 aaKnown RBP8.2□□□□□ -1.1
PROM1-206ENST00000505450 NUMBLQ9Y6R0 609 aa8.2□□□□□ -1.1
PROM1-206ENST00000505450 GRK2P25098 689 aa8.2□□□□□ -1.1
PROM1-206ENST00000505450 GMPRP36959 345 aa8.2□□□□□ -1.1
PROM1-206ENST00000505450 KCNT2Q6UVM3 1135 aa8.2□□□□□ -1.1
PROM1-206ENST00000505450 SAMD3Q8N6K7 520 aa8.2□□□□□ -1.1
PROM1-206ENST00000505450 ARRDC4Q8NCT1 418 aa8.2□□□□□ -1.1
PROM1-206ENST00000505450 DDI1Q8WTU0 396 aa8.2□□□□□ -1.1
PROM1-206ENST00000505450 CPXM1Q96SM3 734 aa8.2□□□□□ -1.1
PROM1-206ENST00000505450 ZNF518BQ9C0D4 1074 aa8.2□□□□□ -1.1
PROM1-206ENST00000505450 LIN28AQ9H9Z2 209 aaKnown RBP8.2□□□□□ -1.1
PROM1-206ENST00000505450 KCNK13Q9HB14 408 aa8.2□□□□□ -1.1
PROM1-206ENST00000505450 GPAMQ9HCL2 828 aa8.2□□□□□ -1.1
PROM1-206ENST00000505450 WARS2Q9UGM6 360 aaKnown RBP8.2□□□□□ -1.1
PROM1-206ENST00000505450 DCDC2Q9UHG0 476 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms