RNA–Protein interactions for RNA: ENST00000504782.5

RNF4-206, Transcript of ring finger protein 4, humanhuman

TSL 2

Gene RNF4, Length 614 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-206ENST00000504782 FCRL2Q96LA5 508 aaPredicted RBP13.31□□□□□ -0.28
RNF4-206ENST00000504782 PRICKLE1Q96MT3 831 aaPredicted RBP13.31□□□□□ -0.28
RNF4-206ENST00000504782 GTPBP2Q9BX10 602 aaKnown RBP13.31□□□□□ -0.28
RNF4-206ENST00000504782 GPR174Q9BXC1 333 aa13.31□□□□□ -0.28
RNF4-206ENST00000504782 MTG2Q9H4K7 406 aa13.31□□□□□ -0.28
RNF4-206ENST00000504782 ITM2CQ9NQX7 267 aa13.31□□□□□ -0.28
RNF4-206ENST00000504782 ST7Q9NRC1 585 aa13.31□□□□□ -0.28
RNF4-206ENST00000504782 WSB2Q9NYS7 404 aaPredicted RBP13.31□□□□□ -0.28
RNF4-206ENST00000504782 SLC6A14Q9UN76 642 aa13.31□□□□□ -0.28
RNF4-206ENST00000504782 NUMA1Q14980 2115 aa13.31□□□□□ -0.28
RNF4-206ENST00000504782 NYNRINQ9P2P1 1898 aaKnown RBP13.3□□□□□ -0.28
RNF4-206ENST00000504782 PAPSS1O43252 624 aaPredicted RBP13.3□□□□□ -0.28
RNF4-206ENST00000504782 ACSL4O60488 711 aa13.3□□□□□ -0.28
RNF4-206ENST00000504782 SYNCRIPO60506 623 aaKnown RBP13.3□□□□□ -0.28
RNF4-206ENST00000504782 NDUFS2O75306 463 aa13.3□□□□□ -0.28
RNF4-206ENST00000504782 LETM1O95202 739 aaPredicted RBP13.3□□□□□ -0.28
RNF4-206ENST00000504782 SERPINF2P08697 491 aa13.3□□□□□ -0.28
RNF4-206ENST00000504782 CD6P30203 668 aa13.3□□□□□ -0.28
RNF4-206ENST00000504782 RPS24P62847 133 aaKnown RBP13.3□□□□□ -0.28
RNF4-206ENST00000504782 ZNF252P-AS1Q0IIN9 211 aa13.3□□□□□ -0.28
RNF4-206ENST00000504782 LMAN2Q12907 356 aa13.3□□□□□ -0.28
RNF4-206ENST00000504782 STARD3Q14849 445 aa13.3□□□□□ -0.28
RNF4-206ENST00000504782 STILQ15468 1287 aa13.3□□□□□ -0.28
RNF4-206ENST00000504782 TAF5Q15542 800 aa13.3□□□□□ -0.28
RNF4-206ENST00000504782 TRIM65Q6PJ69 517 aa13.3□□□□□ -0.28
RNF4-206ENST00000504782 SERPINA13PQ6UXR4 307 aa13.3□□□□□ -0.28
RNF4-206ENST00000504782 MMS22LQ6ZRQ5 1243 aa13.3□□□□□ -0.28
RNF4-206ENST00000504782 FAM124AQ86V42 546 aa13.3□□□□□ -0.28
RNF4-206ENST00000504782 RGL4Q8IZJ4 473 aa13.3□□□□□ -0.28
RNF4-206ENST00000504782 WDTC1Q8N5D0 677 aa13.3□□□□□ -0.28
RNF4-206ENST00000504782 ZNF606Q8WXB4 792 aa13.3□□□□□ -0.28
RNF4-206ENST00000504782 SIPA1Q96FS4 1042 aa13.3□□□□□ -0.28
RNF4-206ENST00000504782 LMLNQ96KR4 655 aa13.3□□□□□ -0.28
RNF4-206ENST00000504782 SLC4A5Q9BY07 1137 aa13.3□□□□□ -0.28
RNF4-206ENST00000504782 NUCKS1Q9H1E3 243 aaKnown RBP13.3□□□□□ -0.28
RNF4-206ENST00000504782 TMEM245Q9H330 911 aa13.3□□□□□ -0.28
RNF4-206ENST00000504782 STIM2Q9P246 746 aa13.3□□□□□ -0.28
RNF4-206ENST00000504782 RWDD2AQ9UIY3 292 aa13.3□□□□□ -0.28
RNF4-206ENST00000504782 GGA2Q9UJY4 613 aa13.3□□□□□ -0.28
RNF4-206ENST00000504782 ANGPTL2Q9UKU9 493 aa13.3□□□□□ -0.28
RNF4-206ENST00000504782 WASF3Q9UPY6 502 aa13.3□□□□□ -0.28
RNF4-206ENST00000504782 SLCO1B1Q9Y6L6 691 aa13.3□□□□□ -0.28
RNF4-206ENST00000504782 TMEM131Q92545 1883 aa13.29□□□□□ -0.28
RNF4-206ENST00000504782 E5RJQ4 531 aa13.29□□□□□ -0.28
RNF4-206ENST00000504782 THAP12O43422 761 aa13.29□□□□□ -0.28
RNF4-206ENST00000504782 FBXO21O94952 628 aa13.29□□□□□ -0.28
RNF4-206ENST00000504782 LATS1O95835 1130 aa13.29□□□□□ -0.28
RNF4-206ENST00000504782 PABPC1P11940 636 aaKnown RBP13.29□□□□□ -0.28
RNF4-206ENST00000504782 CSRP1P21291 193 aaKnown RBP13.29□□□□□ -0.28
RNF4-206ENST00000504782 NUMBP49757 651 aa13.29□□□□□ -0.28
RNF4-206ENST00000504782 UBE2HP62256 183 aa13.29□□□□□ -0.28
RNF4-206ENST00000504782 FAM193AP78312 1265 aa13.29□□□□□ -0.28
RNF4-206ENST00000504782 GFPT1Q06210 699 aaPredicted RBP13.29□□□□□ -0.28
RNF4-206ENST00000504782 EIF4HQ15056 248 aaKnown RBP13.29□□□□□ -0.28
RNF4-206ENST00000504782 ARHGAP44Q17R89 818 aa13.29□□□□□ -0.28
RNF4-206ENST00000504782 FNDC3BQ53EP0 1204 aaKnown RBP13.29□□□□□ -0.28
RNF4-206ENST00000504782 FSCBQ5H9T9 825 aa13.29□□□□□ -0.28
RNF4-206ENST00000504782 MBLAC2Q68D91 279 aa13.29□□□□□ -0.28
RNF4-206ENST00000504782 METTL3Q86U44 580 aaKnown RBP13.29□□□□□ -0.28
RNF4-206ENST00000504782 TAC4Q86UU9 113 aa13.29□□□□□ -0.28
RNF4-206ENST00000504782 CFAP52Q8N1V2 620 aa13.29□□□□□ -0.28
RNF4-206ENST00000504782 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.29□□□□□ -0.28
RNF4-206ENST00000504782 PRCCQ92733 491 aaPredicted RBP13.29□□□□□ -0.28
RNF4-206ENST00000504782 FAM149B1Q96BN6 582 aa13.29□□□□□ -0.28
RNF4-206ENST00000504782 MYO19Q96H55 970 aa13.29□□□□□ -0.28
RNF4-206ENST00000504782 SLC39A13Q96H72 371 aa13.29□□□□□ -0.28
RNF4-206ENST00000504782 INTS6Q9UL03 887 aaKnown RBP13.29□□□□□ -0.28
RNF4-206ENST00000504782 KMT2BQ9UMN6 2715 aaPredicted RBP13.28□□□□□ -0.28
RNF4-206ENST00000504782 SPAARA0A1B0GVQ0 90 aa13.28□□□□□ -0.28
RNF4-206ENST00000504782 ARHGAP33O14559 1287 aa13.28□□□□□ -0.28
RNF4-206ENST00000504782 NPC1O15118 1278 aa13.28□□□□□ -0.28
RNF4-206ENST00000504782 TIMM44O43615 452 aa13.28□□□□□ -0.28
RNF4-206ENST00000504782 MOCS2O96007 188 aaPredicted RBP13.28□□□□□ -0.28
RNF4-206ENST00000504782 PNMA6AP0CW24 399 aaPredicted RBP13.28□□□□□ -0.28
RNF4-206ENST00000504782 CEACAM1P13688 526 aa13.28□□□□□ -0.28
RNF4-206ENST00000504782 GNA15P30679 374 aa13.28□□□□□ -0.28
RNF4-206ENST00000504782 HOXD12P35452 270 aa13.28□□□□□ -0.28
RNF4-206ENST00000504782 USP8P40818 1118 aa13.28□□□□□ -0.28
RNF4-206ENST00000504782 SLC11A2P49281 568 aa13.28□□□□□ -0.28
RNF4-206ENST00000504782 SHC2P98077 582 aa13.28□□□□□ -0.28
RNF4-206ENST00000504782 ARID5AQ03989 594 aa13.28□□□□□ -0.28
RNF4-206ENST00000504782 RING1Q06587 406 aa13.28□□□□□ -0.28
RNF4-206ENST00000504782 FOXC1Q12948 553 aa13.28□□□□□ -0.28
RNF4-206ENST00000504782 SEMA3BQ13214 749 aa13.28□□□□□ -0.28
RNF4-206ENST00000504782 CAMK2GQ13555 558 aaPredicted RBP13.28□□□□□ -0.28
RNF4-206ENST00000504782 ZC3H12AQ5D1E8 599 aaKnown RBP13.28□□□□□ -0.28
RNF4-206ENST00000504782 DCAF12L1Q5VU92 463 aa13.28□□□□□ -0.28
RNF4-206ENST00000504782 NUGGCQ68CJ6 796 aa13.28□□□□□ -0.28
RNF4-206ENST00000504782 PIP4P1Q86T03 277 aa13.28□□□□□ -0.28
RNF4-206ENST00000504782 UNC45BQ8IWX7 931 aa13.28□□□□□ -0.28
RNF4-206ENST00000504782 MINDY1Q8N5J2 469 aa13.28□□□□□ -0.28
RNF4-206ENST00000504782 CEP76Q8TAP6 659 aa13.28□□□□□ -0.28
RNF4-206ENST00000504782 CAMK1GQ96NX5 476 aa13.28□□□□□ -0.28
RNF4-206ENST00000504782 SIX2Q9NPC8 291 aa13.28□□□□□ -0.28
RNF4-206ENST00000504782 PRSS16Q9NQE7 514 aa13.28□□□□□ -0.28
RNF4-206ENST00000504782 TLR6Q9Y2C9 796 aa13.28□□□□□ -0.28
RNF4-206ENST00000504782 MAP1BP46821 2468 aaKnown RBP13.28□□□□□ -0.28
RNF4-206ENST00000504782 PLXNA2O75051 1894 aa13.27□□□□□ -0.28
RNF4-206ENST00000504782 TP53BP1Q12888 1972 aaPredicted RBP13.27□□□□□ -0.28
RNF4-206ENST00000504782 PCNX2A6NKB5 2137 aa13.27□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms