RNA–Protein interactions for RNA: ENST00000504557.1

HOXC9-202, Transcript of homeobox C9, humanhuman

TSL 3

Gene HOXC9, Length 581 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC9-202ENST00000504557 RSPO4Q2I0M5 234 aaPredicted RBP14.8□□□□□ -0.04
HOXC9-202ENST00000504557 FAM133BQ5BKY9 247 aaKnown RBP14.8□□□□□ -0.04
HOXC9-202ENST00000504557 EFHC1Q5JVL4 640 aa14.8□□□□□ -0.04
HOXC9-202ENST00000504557 PIK3R6Q5UE93 754 aa14.8□□□□□ -0.04
HOXC9-202ENST00000504557 RAP1GAP2Q684P5 730 aa14.8□□□□□ -0.04
HOXC9-202ENST00000504557 KIAA1324Q6UXG2 1013 aaKnown RBP14.8□□□□□ -0.04
HOXC9-202ENST00000504557 CHST9Q7L1S5 443 aa14.8□□□□□ -0.04
HOXC9-202ENST00000504557 CHSY1Q86X52 802 aa14.8□□□□□ -0.04
HOXC9-202ENST00000504557 LGI2Q8N0V4 545 aa14.8□□□□□ -0.04
HOXC9-202ENST00000504557 CARNMT1Q8N4J0 409 aa14.8□□□□□ -0.04
HOXC9-202ENST00000504557 TMEM35BQ8NCS4 154 aa14.8□□□□□ -0.04
HOXC9-202ENST00000504557 NEK11Q8NG66 645 aa14.8□□□□□ -0.04
HOXC9-202ENST00000504557 WFDC5Q8TCV5 224 aa14.8□□□□□ -0.04
HOXC9-202ENST00000504557 KCNV2Q8TDN2 545 aa14.8□□□□□ -0.04
HOXC9-202ENST00000504557 CYB5D2Q8WUJ1 264 aa14.8□□□□□ -0.04
HOXC9-202ENST00000504557 SLC20A1Q8WUM9 679 aa14.8□□□□□ -0.04
HOXC9-202ENST00000504557 RMDN1Q96DB5 314 aa14.8□□□□□ -0.04
HOXC9-202ENST00000504557 MYEOVQ96EZ4 313 aa14.8□□□□□ -0.04
HOXC9-202ENST00000504557 SPACA7Q96KW9 195 aa14.8□□□□□ -0.04
HOXC9-202ENST00000504557 SPAG5Q96R06 1193 aa14.8□□□□□ -0.04
HOXC9-202ENST00000504557 DDIT4Q9NX09 232 aa14.8□□□□□ -0.04
HOXC9-202ENST00000504557 SLC27A6Q9Y2P4 619 aa14.8□□□□□ -0.04
HOXC9-202ENST00000504557 STARD13Q9Y3M8 1113 aa14.8□□□□□ -0.04
HOXC9-202ENST00000504557 CEP250Q9BV73 2442 aa14.8□□□□□ -0.04
HOXC9-202ENST00000504557 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa14.79□□□□□ -0.04
HOXC9-202ENST00000504557 A0A1W2PQF6 199 aa14.79□□□□□ -0.04
HOXC9-202ENST00000504557 TYW5A2RUC4 315 aaKnown RBP14.79□□□□□ -0.04
HOXC9-202ENST00000504557 GOLGA8SH3BPF8 625 aa14.79□□□□□ -0.04
HOXC9-202ENST00000504557 IRAK2O43187 625 aa14.79□□□□□ -0.04
HOXC9-202ENST00000504557 HSF2BPO75031 334 aa14.79□□□□□ -0.04
HOXC9-202ENST00000504557 LATS1O95835 1130 aa14.79□□□□□ -0.04
HOXC9-202ENST00000504557 ATP1A3P13637 1013 aa14.79□□□□□ -0.04
HOXC9-202ENST00000504557 HLA-FP30511 346 aa14.79□□□□□ -0.04
HOXC9-202ENST00000504557 IL12RB1P42701 662 aa14.79□□□□□ -0.04
HOXC9-202ENST00000504557 SNX16P57768 344 aa14.79□□□□□ -0.04
HOXC9-202ENST00000504557 RING1Q06587 406 aa14.79□□□□□ -0.04
HOXC9-202ENST00000504557 ZNF234Q14588 700 aa14.79□□□□□ -0.04
HOXC9-202ENST00000504557 FNDC3BQ53EP0 1204 aaKnown RBP14.79□□□□□ -0.04
HOXC9-202ENST00000504557 NAA35Q5VZE5 725 aa14.79□□□□□ -0.04
HOXC9-202ENST00000504557 TMEM215Q68D42 235 aa14.79□□□□□ -0.04
HOXC9-202ENST00000504557 OLFML1Q6UWY5 402 aa14.79□□□□□ -0.04
HOXC9-202ENST00000504557 PHLDB2Q86SQ0 1253 aa14.79□□□□□ -0.04
HOXC9-202ENST00000504557 ERICH1Q86X53 443 aa14.79□□□□□ -0.04
HOXC9-202ENST00000504557 MFN1Q8IWA4 741 aa14.79□□□□□ -0.04
HOXC9-202ENST00000504557 TMEFF1Q8IYR6 380 aa14.79□□□□□ -0.04
HOXC9-202ENST00000504557 ZNF366Q8N895 744 aa14.79□□□□□ -0.04
HOXC9-202ENST00000504557 HJURPQ8NCD3 748 aaPredicted RBP14.79□□□□□ -0.04
HOXC9-202ENST00000504557 CPA5Q8WXQ8 436 aa14.79□□□□□ -0.04
HOXC9-202ENST00000504557 PRICKLE1Q96MT3 831 aaPredicted RBP14.79□□□□□ -0.04
HOXC9-202ENST00000504557 DDX50Q9BQ39 737 aaKnown RBP14.79□□□□□ -0.04
HOXC9-202ENST00000504557 NAT10Q9H0A0 1025 aaKnown RBP14.79□□□□□ -0.04
HOXC9-202ENST00000504557 ELOVL2Q9NXB9 296 aa14.79□□□□□ -0.04
HOXC9-202ENST00000504557 CALCOCO1Q9P1Z2 691 aa14.79□□□□□ -0.04
HOXC9-202ENST00000504557 LIMA1Q9UHB6 759 aaKnown RBP14.79□□□□□ -0.04
HOXC9-202ENST00000504557 GGA2Q9UJY4 613 aa14.79□□□□□ -0.04
HOXC9-202ENST00000504557 STOML2Q9UJZ1 356 aa14.79□□□□□ -0.04
HOXC9-202ENST00000504557 TNRC6BQ9UPQ9 1833 aaKnown RBP14.79□□□□□ -0.04
HOXC9-202ENST00000504557 LOC105378220A0A1B0GUY1 285 aaPredicted RBP14.78□□□□□ -0.04
HOXC9-202ENST00000504557 LGALS16A8MUM7 142 aa14.78□□□□□ -0.04
HOXC9-202ENST00000504557 SYNCRIPO60506 623 aaKnown RBP14.78□□□□□ -0.04
HOXC9-202ENST00000504557 EPN2O95208 641 aa14.78□□□□□ -0.04
HOXC9-202ENST00000504557 EPHX1P07099 455 aa14.78□□□□□ -0.04
HOXC9-202ENST00000504557 PABPC1P11940 636 aaKnown RBP14.78□□□□□ -0.04
HOXC9-202ENST00000504557 HLA-EP13747 358 aa14.78□□□□□ -0.04
HOXC9-202ENST00000504557 NDUFV2P19404 249 aa14.78□□□□□ -0.04
HOXC9-202ENST00000504557 TACR2P21452 398 aa14.78□□□□□ -0.04
HOXC9-202ENST00000504557 TGM1P22735 817 aa14.78□□□□□ -0.04
HOXC9-202ENST00000504557 CD70P32970 193 aa14.78□□□□□ -0.04
HOXC9-202ENST00000504557 GGCXP38435 758 aa14.78□□□□□ -0.04
HOXC9-202ENST00000504557 MPLP40238 635 aa14.78□□□□□ -0.04
HOXC9-202ENST00000504557 ZNF445P59923 1031 aa14.78□□□□□ -0.04
HOXC9-202ENST00000504557 SLC6A3Q01959 620 aa14.78□□□□□ -0.04
HOXC9-202ENST00000504557 STARD3Q14849 445 aa14.78□□□□□ -0.04
HOXC9-202ENST00000504557 NCAPHQ15003 741 aa14.78□□□□□ -0.04
HOXC9-202ENST00000504557 AASDHQ4L235 1098 aaPredicted RBP14.78□□□□□ -0.04
HOXC9-202ENST00000504557 FAM102AQ5T9C2 384 aaPredicted RBP14.78□□□□□ -0.04
HOXC9-202ENST00000504557 SERPINA13PQ6UXR4 307 aa14.78□□□□□ -0.04
HOXC9-202ENST00000504557 PRR23CQ6ZRP0 262 aa14.78□□□□□ -0.04
HOXC9-202ENST00000504557 CIR1Q86X95 450 aaPredicted RBP14.78□□□□□ -0.04
HOXC9-202ENST00000504557 CCDC117Q8IWD4 279 aaPredicted RBP14.78□□□□□ -0.04
HOXC9-202ENST00000504557 GPR161Q8N6U8 529 aaKnown RBP14.78□□□□□ -0.04
HOXC9-202ENST00000504557 ATP6V0D2Q8N8Y2 350 aa14.78□□□□□ -0.04
HOXC9-202ENST00000504557 C12orf50Q8NA57 414 aaPredicted RBP14.78□□□□□ -0.04
HOXC9-202ENST00000504557 EPS8L1Q8TE68 723 aa14.78□□□□□ -0.04
HOXC9-202ENST00000504557 SLC39A13Q96H72 371 aa14.78□□□□□ -0.04
HOXC9-202ENST00000504557 GABRG3Q99928 467 aa14.78□□□□□ -0.04
HOXC9-202ENST00000504557 SLC2A11Q9BYW1 496 aa14.78□□□□□ -0.04
HOXC9-202ENST00000504557 CD93Q9NPY3 652 aa14.78□□□□□ -0.04
HOXC9-202ENST00000504557 SEPT11Q9NVA2 429 aaKnown RBP14.78□□□□□ -0.04
HOXC9-202ENST00000504557 THAP10Q9P2Z0 257 aaPredicted RBP14.78□□□□□ -0.04
HOXC9-202ENST00000504557 CDV3Q9UKY7 258 aaKnown RBP14.78□□□□□ -0.04
HOXC9-202ENST00000504557 CYP8B1Q9UNU6 501 aa14.78□□□□□ -0.04
HOXC9-202ENST00000504557 SIK3Q9Y2K2 1263 aa14.78□□□□□ -0.04
HOXC9-202ENST00000504557 DMXL1Q9Y485 3027 aa14.78□□□□□ -0.04
HOXC9-202ENST00000504557 NYNRINQ9P2P1 1898 aaKnown RBP14.78□□□□□ -0.04
HOXC9-202ENST00000504557 ATXN2Q99700 1313 aaKnown RBP14.77□□□□□ -0.04
HOXC9-202ENST00000504557 M0QYT0 321 aa14.77□□□□□ -0.05
HOXC9-202ENST00000504557 GDF9O60383 454 aa14.77□□□□□ -0.05
HOXC9-202ENST00000504557 DAB1O75553 588 aa14.77□□□□□ -0.05
HOXC9-202ENST00000504557 ABCB4P21439 1286 aa14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms