RNA–Protein interactions for RNA: ENST00000504489.3

PDLIM5-208, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4 BASIC

Gene PDLIM5, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-208ENST00000504489 SYNJ2BP-COX16A0A087WUM0 186 aa12.35□□□□□ -0.43
PDLIM5-208ENST00000504489 KRBA1A5PL33 1030 aa12.35□□□□□ -0.43
PDLIM5-208ENST00000504489 SOWAHDA6NJG2 315 aa12.35□□□□□ -0.43
PDLIM5-208ENST00000504489 GFRA2O00451 464 aa12.35□□□□□ -0.43
PDLIM5-208ENST00000504489 NDUFA10O95299 355 aa12.35□□□□□ -0.43
PDLIM5-208ENST00000504489 DESP17661 470 aa12.35□□□□□ -0.43
PDLIM5-208ENST00000504489 RDXP35241 583 aaKnown RBP12.35□□□□□ -0.43
PDLIM5-208ENST00000504489 STARD6P59095 220 aa12.35□□□□□ -0.43
PDLIM5-208ENST00000504489 ATP11AP98196 1134 aa12.35□□□□□ -0.43
PDLIM5-208ENST00000504489 AMPD2Q01433 879 aa12.35□□□□□ -0.43
PDLIM5-208ENST00000504489 OGDHQ02218 1023 aa12.35□□□□□ -0.43
PDLIM5-208ENST00000504489 SPA17Q15506 151 aa12.35□□□□□ -0.43
PDLIM5-208ENST00000504489 C15orf59Q2T9L4 293 aaPredicted RBP12.35□□□□□ -0.43
PDLIM5-208ENST00000504489 GAB4Q2WGN9 574 aa12.35□□□□□ -0.43
PDLIM5-208ENST00000504489 NADSYN1Q6IA69 706 aa12.35□□□□□ -0.43
PDLIM5-208ENST00000504489 C1orf228Q6PIY5 440 aa12.35□□□□□ -0.43
PDLIM5-208ENST00000504489 TMEM25Q86YD3 366 aa12.35□□□□□ -0.43
PDLIM5-208ENST00000504489 ANP32BQ92688 251 aaKnown RBP12.35□□□□□ -0.43
PDLIM5-208ENST00000504489 ARHGEF26Q96DR7 871 aa12.35□□□□□ -0.43
PDLIM5-208ENST00000504489 NUP85Q9BW27 656 aa12.35□□□□□ -0.43
PDLIM5-208ENST00000504489 LUC7LQ9NQ29 371 aaKnown RBP12.35□□□□□ -0.43
PDLIM5-208ENST00000504489 ARHGEF3Q9NR81 526 aa12.35□□□□□ -0.43
PDLIM5-208ENST00000504489 ARHGEF38Q9NXL2 777 aa12.35□□□□□ -0.43
PDLIM5-208ENST00000504489 MARK1Q9P0L2 795 aa12.35□□□□□ -0.43
PDLIM5-208ENST00000504489 COX16Q9P0S2 106 aa12.35□□□□□ -0.43
PDLIM5-208ENST00000504489 UVRAGQ9P2Y5 699 aa12.35□□□□□ -0.43
PDLIM5-208ENST00000504489 CA14Q9ULX7 337 aa12.35□□□□□ -0.43
PDLIM5-208ENST00000504489 CACNA1IQ9P0X4 2223 aa12.34□□□□□ -0.43
PDLIM5-208ENST00000504489 ZDBF2Q9HCK1 2354 aa12.34□□□□□ -0.43
PDLIM5-208ENST00000504489 SHISA7A6NL88 538 aa12.34□□□□□ -0.43
PDLIM5-208ENST00000504489 SPECC1L-ADORA2AF8WAN1 911 aa12.34□□□□□ -0.43
PDLIM5-208ENST00000504489 MAN2B1O00754 1011 aa12.34□□□□□ -0.43
PDLIM5-208ENST00000504489 HOXC11O43248 304 aaPredicted RBP12.34□□□□□ -0.43
PDLIM5-208ENST00000504489 CCP110O43303 1012 aa12.34□□□□□ -0.43
PDLIM5-208ENST00000504489 ADH5P11766 374 aa12.34□□□□□ -0.43
PDLIM5-208ENST00000504489 PSMA2P25787 234 aa12.34□□□□□ -0.43
PDLIM5-208ENST00000504489 CTHP32929 405 aa12.34□□□□□ -0.43
PDLIM5-208ENST00000504489 GJA4P35212 333 aa12.34□□□□□ -0.43
PDLIM5-208ENST00000504489 MAGEA1P43355 309 aa12.34□□□□□ -0.43
PDLIM5-208ENST00000504489 ATXN1P54253 815 aaKnown RBP12.34□□□□□ -0.43
PDLIM5-208ENST00000504489 HDAC4P56524 1084 aa12.34□□□□□ -0.43
PDLIM5-208ENST00000504489 GAD2Q05329 585 aa12.34□□□□□ -0.43
PDLIM5-208ENST00000504489 ZNF252P-AS1Q0IIN9 211 aa12.34□□□□□ -0.43
PDLIM5-208ENST00000504489 ACAP1Q15027 740 aa12.34□□□□□ -0.43
PDLIM5-208ENST00000504489 TCEAL1Q15170 157 aa12.34□□□□□ -0.43
PDLIM5-208ENST00000504489 CDO1Q16878 200 aa12.34□□□□□ -0.43
PDLIM5-208ENST00000504489 FAM133BQ5BKY9 247 aaKnown RBP12.34□□□□□ -0.43
PDLIM5-208ENST00000504489 ACBD5Q5T8D3 534 aaPredicted RBP12.34□□□□□ -0.43
PDLIM5-208ENST00000504489 SH3PXD2AQ5TCZ1 1133 aa12.34□□□□□ -0.43
PDLIM5-208ENST00000504489 RAD9BQ6WBX8 426 aa12.34□□□□□ -0.43
PDLIM5-208ENST00000504489 SIX5Q8N196 739 aa12.34□□□□□ -0.43
PDLIM5-208ENST00000504489 TTC8Q8TAM2 541 aa12.34□□□□□ -0.43
PDLIM5-208ENST00000504489 FAM172AQ8WUF8 416 aa12.34□□□□□ -0.43
PDLIM5-208ENST00000504489 CHFRQ96EP1 664 aa12.34□□□□□ -0.43
PDLIM5-208ENST00000504489 NCAPGQ9BPX3 1015 aa12.34□□□□□ -0.43
PDLIM5-208ENST00000504489 TRIM7Q9C029 511 aa12.34□□□□□ -0.43
PDLIM5-208ENST00000504489 TKTL2Q9H0I9 626 aa12.34□□□□□ -0.43
PDLIM5-208ENST00000504489 EPHX3Q9H6B9 360 aa12.34□□□□□ -0.43
PDLIM5-208ENST00000504489 PCDHA13Q9Y5I0 950 aa12.34□□□□□ -0.43
PDLIM5-208ENST00000504489 PIAS3Q9Y6X2 628 aa12.34□□□□□ -0.43
PDLIM5-208ENST00000504489 SHROOM3Q8TF72 1996 aa12.34□□□□□ -0.43
PDLIM5-208ENST00000504489 TMEM221A6NGB7 291 aa12.33□□□□□ -0.44
PDLIM5-208ENST00000504489 M0R296 226 aa12.33□□□□□ -0.44
PDLIM5-208ENST00000504489 PAGE1O75459 146 aa12.33□□□□□ -0.44
PDLIM5-208ENST00000504489 RNF8O76064 485 aa12.33□□□□□ -0.44
PDLIM5-208ENST00000504489 IPO7O95373 1038 aaKnown RBP12.33□□□□□ -0.44
PDLIM5-208ENST00000504489 MOCS2O96007 188 aaPredicted RBP12.33□□□□□ -0.44
PDLIM5-208ENST00000504489 CYBBP04839 570 aa12.33□□□□□ -0.44
PDLIM5-208ENST00000504489 SLC6A4P31645 630 aa12.33□□□□□ -0.44
PDLIM5-208ENST00000504489 EIF2DP41214 584 aaKnown RBP12.33□□□□□ -0.44
PDLIM5-208ENST00000504489 SOX9P48436 509 aa12.33□□□□□ -0.44
PDLIM5-208ENST00000504489 PIGHQ14442 188 aaPredicted RBP12.33□□□□□ -0.44
PDLIM5-208ENST00000504489 ANO4Q32M45 955 aa12.33□□□□□ -0.44
PDLIM5-208ENST00000504489 MPPE1Q53F39 396 aa12.33□□□□□ -0.44
PDLIM5-208ENST00000504489 RAB6CQ53S08 254 aa12.33□□□□□ -0.44
PDLIM5-208ENST00000504489 MS4A13Q5J8X5 152 aa12.33□□□□□ -0.44
PDLIM5-208ENST00000504489 PIK3R6Q5UE93 754 aa12.33□□□□□ -0.44
PDLIM5-208ENST00000504489 FYB2Q5VWT5 728 aa12.33□□□□□ -0.44
PDLIM5-208ENST00000504489 TPGS1Q6ZTW0 290 aa12.33□□□□□ -0.44
PDLIM5-208ENST00000504489 TPRG1Q6ZUI0 275 aa12.33□□□□□ -0.44
PDLIM5-208ENST00000504489 FAM131BQ86XD5 332 aa12.33□□□□□ -0.44
PDLIM5-208ENST00000504489 LRRC8AQ8IWT6 810 aa12.33□□□□□ -0.44
PDLIM5-208ENST00000504489 NIPA2Q8N8Q9 360 aa12.33□□□□□ -0.44
PDLIM5-208ENST00000504489 CCDC112Q8NEF3 446 aa12.33□□□□□ -0.44
PDLIM5-208ENST00000504489 ZNF564Q8TBZ8 553 aaPredicted RBP12.33□□□□□ -0.44
PDLIM5-208ENST00000504489 EXOC4Q96A65 974 aa12.33□□□□□ -0.44
PDLIM5-208ENST00000504489 NTAN1Q96AB6 310 aa12.33□□□□□ -0.44
PDLIM5-208ENST00000504489 TMA16Q96EY4 203 aaKnown RBP12.33□□□□□ -0.44
PDLIM5-208ENST00000504489 C1orf74Q96LT6 269 aa12.33□□□□□ -0.44
PDLIM5-208ENST00000504489 HAPLN3Q96S86 360 aa12.33□□□□□ -0.44
PDLIM5-208ENST00000504489 NELL2Q99435 816 aa12.33□□□□□ -0.44
PDLIM5-208ENST00000504489 PRMT1Q99873 361 aaKnown RBP12.33□□□□□ -0.44
PDLIM5-208ENST00000504489 BBS2Q9BXC9 721 aa12.33□□□□□ -0.44
PDLIM5-208ENST00000504489 RAB6CQ9H0N0 254 aa12.33□□□□□ -0.44
PDLIM5-208ENST00000504489 ANLNQ9NQW6 1124 aa12.33□□□□□ -0.44
PDLIM5-208ENST00000504489 CTTNBP2NLQ9P2B4 639 aa12.33□□□□□ -0.44
PDLIM5-208ENST00000504489 IP6K2Q9UHH9 426 aa12.33□□□□□ -0.44
PDLIM5-208ENST00000504489 XPO7Q9UIA9 1087 aaKnown RBP12.33□□□□□ -0.44
PDLIM5-208ENST00000504489 LCMT1Q9UIC8 334 aa12.33□□□□□ -0.44
PDLIM5-208ENST00000504489 ANAPC7Q9UJX3 599 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms