RNA–Protein interactions for RNA: ENST00000503338.5

TOPBP1-202, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 3

Gene TOPBP1, Length 618 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-202ENST00000503338 GDF15Q99988 308 aa8.41□□□□□ -1.06
TOPBP1-202ENST00000503338 DDX50Q9BQ39 737 aaKnown RBP8.41□□□□□ -1.06
TOPBP1-202ENST00000503338 HERPUD2Q9BSE4 406 aa8.41□□□□□ -1.06
TOPBP1-202ENST00000503338 C17orf80Q9BSJ5 609 aa8.41□□□□□ -1.06
TOPBP1-202ENST00000503338 RAB6CQ9H0N0 254 aa8.41□□□□□ -1.06
TOPBP1-202ENST00000503338 ALG13Q9NP73 1137 aaKnown RBP8.41□□□□□ -1.06
TOPBP1-202ENST00000503338 ARHGEF4Q9NR80 690 aa8.41□□□□□ -1.06
TOPBP1-202ENST00000503338 GPATCH2LQ9NWQ4 482 aa8.41□□□□□ -1.06
TOPBP1-202ENST00000503338 OSER1Q9NX31 292 aa8.41□□□□□ -1.06
TOPBP1-202ENST00000503338 OR12D3Q9UGF7 316 aa8.41□□□□□ -1.06
TOPBP1-202ENST00000503338 SFMBT1Q9UHJ3 866 aa8.41□□□□□ -1.06
TOPBP1-202ENST00000503338 DMGDHQ9UI17 866 aaKnown RBP8.41□□□□□ -1.06
TOPBP1-202ENST00000503338 KIAA1671Q9BY89 1806 aa8.4□□□□□ -1.06
TOPBP1-202ENST00000503338 SLC12A8A0AV02 714 aa8.4□□□□□ -1.06
TOPBP1-202ENST00000503338 BCLAF3A2AJT9 711 aaKnown RBP8.4□□□□□ -1.06
TOPBP1-202ENST00000503338 WASH4PA8MWX3 477 aa8.4□□□□□ -1.06
TOPBP1-202ENST00000503338 BHMG1C9JSJ3 638 aaPredicted RBP8.4□□□□□ -1.06
TOPBP1-202ENST00000503338 H7C0C1 242 aa8.4□□□□□ -1.06
TOPBP1-202ENST00000503338 PPP1R12AO14974 1030 aaPredicted RBP8.4□□□□□ -1.06
TOPBP1-202ENST00000503338 DCLK1O15075 740 aa8.4□□□□□ -1.06
TOPBP1-202ENST00000503338 MTSS1O43312 755 aa8.4□□□□□ -1.06
TOPBP1-202ENST00000503338 ZMYND10O75800 440 aa8.4□□□□□ -1.06
TOPBP1-202ENST00000503338 LATS1O95835 1130 aa8.4□□□□□ -1.06
TOPBP1-202ENST00000503338 IGLV3-27P01718 113 aa8.4□□□□□ -1.06
TOPBP1-202ENST00000503338 F11P03951 625 aa8.4□□□□□ -1.06
TOPBP1-202ENST00000503338 RBP3P10745 1247 aa8.4□□□□□ -1.06
TOPBP1-202ENST00000503338 GOT1P17174 413 aa8.4□□□□□ -1.06
TOPBP1-202ENST00000503338 ITIH2P19823 946 aa8.4□□□□□ -1.06
TOPBP1-202ENST00000503338 EPHB2P29323 1055 aa8.4□□□□□ -1.06
TOPBP1-202ENST00000503338 PTGIRP43119 386 aa8.4□□□□□ -1.06
TOPBP1-202ENST00000503338 ATP5OP48047 213 aa8.4□□□□□ -1.06
TOPBP1-202ENST00000503338 SLC11A2P49281 568 aa8.4□□□□□ -1.06
TOPBP1-202ENST00000503338 HARS2P49590 506 aaKnown RBP8.4□□□□□ -1.06
TOPBP1-202ENST00000503338 MLLT6P55198 1093 aaPredicted RBP8.4□□□□□ -1.06
TOPBP1-202ENST00000503338 SLC7A5Q01650 507 aa8.4□□□□□ -1.06
TOPBP1-202ENST00000503338 ZNF33AQ06730 810 aa8.4□□□□□ -1.06
TOPBP1-202ENST00000503338 ADCY2Q08462 1091 aa8.4□□□□□ -1.06
TOPBP1-202ENST00000503338 SNX1Q13596 522 aa8.4□□□□□ -1.06
TOPBP1-202ENST00000503338 DPYSQ14117 519 aa8.4□□□□□ -1.06
TOPBP1-202ENST00000503338 PAFAH1B3Q15102 231 aaKnown RBP8.4□□□□□ -1.06
TOPBP1-202ENST00000503338 PDK1Q15118 436 aa8.4□□□□□ -1.06
TOPBP1-202ENST00000503338 LLGL1Q15334 1064 aa8.4□□□□□ -1.06
TOPBP1-202ENST00000503338 DUPD1Q68J44 220 aa8.4□□□□□ -1.06
TOPBP1-202ENST00000503338 TTC27Q6P3X3 843 aa8.4□□□□□ -1.06
TOPBP1-202ENST00000503338 DARS2Q6PI48 645 aaKnown RBP8.4□□□□□ -1.06
TOPBP1-202ENST00000503338 PCGF5Q86SE9 256 aa8.4□□□□□ -1.06
TOPBP1-202ENST00000503338 ALLCQ8N6M5 410 aa8.4□□□□□ -1.06
TOPBP1-202ENST00000503338 PQLC3Q8N755 202 aa8.4□□□□□ -1.06
TOPBP1-202ENST00000503338 ATG4AQ8WYN0 398 aa8.4□□□□□ -1.06
TOPBP1-202ENST00000503338 PKNOX2Q96KN3 472 aa8.4□□□□□ -1.06
TOPBP1-202ENST00000503338 FCRL2Q96LA5 508 aaPredicted RBP8.4□□□□□ -1.06
TOPBP1-202ENST00000503338 FOXP3Q9BZS1 431 aa8.4□□□□□ -1.06
TOPBP1-202ENST00000503338 PCDH9Q9HC56 1237 aa8.4□□□□□ -1.06
TOPBP1-202ENST00000503338 ASAH2Q9NR71 780 aa8.4□□□□□ -1.06
TOPBP1-202ENST00000503338 ZDHHC7Q9NXF8 308 aa8.4□□□□□ -1.06
TOPBP1-202ENST00000503338 WHRNQ9P202 907 aa8.4□□□□□ -1.06
TOPBP1-202ENST00000503338 PPARGC1AQ9UBK2 798 aaKnown RBP8.4□□□□□ -1.06
TOPBP1-202ENST00000503338 MTRF1LQ9UGC7 380 aaKnown RBP8.4□□□□□ -1.06
TOPBP1-202ENST00000503338 ASIC3Q9UHC3 531 aa8.4□□□□□ -1.06
TOPBP1-202ENST00000503338 DNPEPQ9ULA0 475 aa8.4□□□□□ -1.06
TOPBP1-202ENST00000503338 R3HDM2Q9Y2K5 976 aaKnown RBP8.4□□□□□ -1.06
TOPBP1-202ENST00000503338 SGK1O00141 431 aa8.39□□□□□ -1.07
TOPBP1-202ENST00000503338 GRM6O15303 877 aa8.39□□□□□ -1.07
TOPBP1-202ENST00000503338 MSI1O43347 362 aaKnown RBP8.39□□□□□ -1.07
TOPBP1-202ENST00000503338 PAGE1O75459 146 aa8.39□□□□□ -1.07
TOPBP1-202ENST00000503338 STK10O94804 968 aaKnown RBP8.39□□□□□ -1.07
TOPBP1-202ENST00000503338 LRIG2O94898 1065 aa8.39□□□□□ -1.07
TOPBP1-202ENST00000503338 OAS1P00973 400 aaKnown RBP8.39□□□□□ -1.07
TOPBP1-202ENST00000503338 KRT14P02533 472 aa8.39□□□□□ -1.07
TOPBP1-202ENST00000503338 ERCC2P18074 760 aa8.39□□□□□ -1.07
TOPBP1-202ENST00000503338 AMPD1P23109 780 aa8.39□□□□□ -1.07
TOPBP1-202ENST00000503338 KCNJ1P48048 391 aa8.39□□□□□ -1.07
TOPBP1-202ENST00000503338 PGFP49763 221 aa8.39□□□□□ -1.07
TOPBP1-202ENST00000503338 CLCN6P51797 869 aa8.39□□□□□ -1.07
TOPBP1-202ENST00000503338 HLTFQ14527 1009 aaKnown RBP eCLIP8.39□□□□□ -1.07
TOPBP1-202ENST00000503338 P3H1Q32P28 736 aa8.39□□□□□ -1.07
TOPBP1-202ENST00000503338 ARHGAP15Q53QZ3 475 aa8.39□□□□□ -1.07
TOPBP1-202ENST00000503338 SLC45A4Q5BKX6 768 aa8.39□□□□□ -1.07
TOPBP1-202ENST00000503338 MANEALQ5VSG8 457 aa8.39□□□□□ -1.07
TOPBP1-202ENST00000503338 PPP2R2DQ66LE6 453 aa8.39□□□□□ -1.07
TOPBP1-202ENST00000503338 NCBP2-AS2Q69YL0 99 aa8.39□□□□□ -1.07
TOPBP1-202ENST00000503338 FBXO38Q6PIJ6 1188 aa8.39□□□□□ -1.07
TOPBP1-202ENST00000503338 C1orf228Q6PIY5 440 aa8.39□□□□□ -1.07
TOPBP1-202ENST00000503338 DDX42Q86XP3 938 aaKnown RBP eCLIP8.39□□□□□ -1.07
TOPBP1-202ENST00000503338 MIB1Q86YT6 1006 aa8.39□□□□□ -1.07
TOPBP1-202ENST00000503338 TNS4Q8IZW8 715 aa8.39□□□□□ -1.07
TOPBP1-202ENST00000503338 PYROXD2Q8N2H3 581 aa8.39□□□□□ -1.07
TOPBP1-202ENST00000503338 TFB1MQ8WVM0 346 aaKnown RBP8.39□□□□□ -1.07
TOPBP1-202ENST00000503338 IFT81Q8WYA0 676 aa8.39□□□□□ -1.07
TOPBP1-202ENST00000503338 RTP4Q96DX8 246 aa8.39□□□□□ -1.07
TOPBP1-202ENST00000503338 SNF8Q96H20 258 aa8.39□□□□□ -1.07
TOPBP1-202ENST00000503338 EPC1Q9H2F5 836 aa8.39□□□□□ -1.07
TOPBP1-202ENST00000503338 CCSER2Q9H7U1 834 aa8.39□□□□□ -1.07
TOPBP1-202ENST00000503338 SLC28A3Q9HAS3 691 aa8.39□□□□□ -1.07
TOPBP1-202ENST00000503338 PAK5Q9P286 719 aa8.39□□□□□ -1.07
TOPBP1-202ENST00000503338 ZNF510Q9Y2H8 683 aa8.39□□□□□ -1.07
TOPBP1-202ENST00000503338 HEY1Q9Y5J3 304 aa8.39□□□□□ -1.07
TOPBP1-202ENST00000503338 GREB1Q4ZG55 1949 aa8.39□□□□□ -1.07
TOPBP1-202ENST00000503338 MYO16Q9Y6X6 1858 aa8.38□□□□□ -1.07
TOPBP1-202ENST00000503338 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms