RNA–Protein interactions for RNA: ENST00000502802.1

HMGB1P3-201, Transcript of high mobility group box 1 pseudogene 3, humanhuman

BASIC

Gene HMGB1P3, Length 616 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P3-201ENST00000502802 ZNF500O60304 480 aaPredicted RBP5.84□□□□□ -1.47
HMGB1P3-201ENST00000502802 TIPRLO75663 272 aa5.84□□□□□ -1.47
HMGB1P3-201ENST00000502802 TMIGD3P0DMS9 266 aaPredicted RBP5.84□□□□□ -1.47
HMGB1P3-201ENST00000502802 CYP3A7P24462 503 aa5.84□□□□□ -1.47
HMGB1P3-201ENST00000502802 SELENOPP49908 381 aa5.84□□□□□ -1.47
HMGB1P3-201ENST00000502802 DRG2P55039 364 aaKnown RBP5.84□□□□□ -1.47
HMGB1P3-201ENST00000502802 TXNL4AP83876 142 aaKnown RBP5.84□□□□□ -1.47
HMGB1P3-201ENST00000502802 NUCB1Q02818 461 aa5.84□□□□□ -1.47
HMGB1P3-201ENST00000502802 CCDC15Q0P6D6 951 aa5.84□□□□□ -1.47
HMGB1P3-201ENST00000502802 MEA1Q16626 185 aa5.84□□□□□ -1.47
HMGB1P3-201ENST00000502802 DENND2CQ68D51 928 aa5.84□□□□□ -1.47
HMGB1P3-201ENST00000502802 B4GALNT4Q76KP1 1039 aa5.84□□□□□ -1.47
HMGB1P3-201ENST00000502802 PARS2Q7L3T8 475 aaKnown RBP5.84□□□□□ -1.47
HMGB1P3-201ENST00000502802 RP9Q8TA86 221 aaKnown RBP5.84□□□□□ -1.47
HMGB1P3-201ENST00000502802 ZCCHC10Q8TBK6 192 aa5.84□□□□□ -1.47
HMGB1P3-201ENST00000502802 CLEC4CQ8WTT0 213 aa5.84□□□□□ -1.47
HMGB1P3-201ENST00000502802 SLC25A43Q8WUT9 341 aaPredicted RBP5.84□□□□□ -1.47
HMGB1P3-201ENST00000502802 FBXL20Q96IG2 436 aa5.84□□□□□ -1.47
HMGB1P3-201ENST00000502802 RSRC1Q96IZ7 334 aaKnown RBP5.84□□□□□ -1.47
HMGB1P3-201ENST00000502802 PBKQ96KB5 322 aa5.84□□□□□ -1.47
HMGB1P3-201ENST00000502802 CLPBQ9H078 707 aa5.84□□□□□ -1.47
HMGB1P3-201ENST00000502802 CDCP1Q9H5V8 836 aa5.84□□□□□ -1.47
HMGB1P3-201ENST00000502802 ZNF703Q9H7S9 590 aaPredicted RBP5.84□□□□□ -1.47
HMGB1P3-201ENST00000502802 PARD6AQ9NPB6 346 aa5.84□□□□□ -1.47
HMGB1P3-201ENST00000502802 KCTD5Q9NXV2 234 aa5.84□□□□□ -1.47
HMGB1P3-201ENST00000502802 CEP72Q9P209 647 aa5.84□□□□□ -1.47
HMGB1P3-201ENST00000502802 TESQ9UGI8 421 aaKnown RBP5.84□□□□□ -1.47
HMGB1P3-201ENST00000502802 AMFRQ9UKV5 643 aa5.84□□□□□ -1.47
HMGB1P3-201ENST00000502802 GPR34Q9UPC5 381 aa5.84□□□□□ -1.47
HMGB1P3-201ENST00000502802 NAALADL1Q9UQQ1 740 aa5.84□□□□□ -1.47
HMGB1P3-201ENST00000502802 H3BNC9 293 aa5.83□□□□□ -1.48
HMGB1P3-201ENST00000502802 GRM8O00222 908 aa5.83□□□□□ -1.48
HMGB1P3-201ENST00000502802 ZNF213O14771 459 aa5.83□□□□□ -1.48
HMGB1P3-201ENST00000502802 TCERG1O14776 1098 aaKnown RBP5.83□□□□□ -1.48
HMGB1P3-201ENST00000502802 TNPO2O14787 897 aaKnown RBP5.83□□□□□ -1.48
HMGB1P3-201ENST00000502802 ALDOAP04075 364 aaKnown RBP5.83□□□□□ -1.48
HMGB1P3-201ENST00000502802 CHRM2P08172 466 aa5.83□□□□□ -1.48
HMGB1P3-201ENST00000502802 ZFXP17010 805 aaPredicted RBP5.83□□□□□ -1.48
HMGB1P3-201ENST00000502802 MATN1P21941 496 aa5.83□□□□□ -1.48
HMGB1P3-201ENST00000502802 CTGFP29279 349 aa5.83□□□□□ -1.48
HMGB1P3-201ENST00000502802 CXCR5P32302 372 aa5.83□□□□□ -1.48
HMGB1P3-201ENST00000502802 GPD2P43304 727 aa5.83□□□□□ -1.48
HMGB1P3-201ENST00000502802 SLC25A3Q00325 362 aa5.83□□□□□ -1.48
HMGB1P3-201ENST00000502802 CDK18Q07002 472 aa5.83□□□□□ -1.48
HMGB1P3-201ENST00000502802 PRICKLE4Q2TBC4 344 aa5.83□□□□□ -1.48
HMGB1P3-201ENST00000502802 TIGD2Q4W5G0 525 aa5.83□□□□□ -1.48
HMGB1P3-201ENST00000502802 KIAA1324Q6UXG2 1013 aaKnown RBP5.83□□□□□ -1.48
HMGB1P3-201ENST00000502802 Q6ZWC4 215 aa5.83□□□□□ -1.48
HMGB1P3-201ENST00000502802 ARHGEF19Q8IW93 802 aa5.83□□□□□ -1.48
HMGB1P3-201ENST00000502802 NGEFQ8N5V2 710 aa5.83□□□□□ -1.48
HMGB1P3-201ENST00000502802 NFKBIDQ8NI38 313 aa5.83□□□□□ -1.48
HMGB1P3-201ENST00000502802 RFKQ969G6 155 aa5.83□□□□□ -1.48
HMGB1P3-201ENST00000502802 SERINC2Q96SA4 455 aa5.83□□□□□ -1.48
HMGB1P3-201ENST00000502802 NUDT16L1Q9BRJ7 211 aaKnown RBP5.83□□□□□ -1.48
HMGB1P3-201ENST00000502802 INTS2Q9H0H0 1204 aaKnown RBP5.83□□□□□ -1.48
HMGB1P3-201ENST00000502802 SNX15Q9NRS6 342 aa5.83□□□□□ -1.48
HMGB1P3-201ENST00000502802 NSMCE4AQ9NXX6 385 aa5.83□□□□□ -1.48
HMGB1P3-201ENST00000502802 CD207Q9UJ71 328 aa5.83□□□□□ -1.48
HMGB1P3-201ENST00000502802 VPS4AQ9UN37 437 aa5.83□□□□□ -1.48
HMGB1P3-201ENST00000502802 CAMK2AQ9UQM7 478 aa5.83□□□□□ -1.48
HMGB1P3-201ENST00000502802 COPG1Q9Y678 874 aaKnown RBP5.83□□□□□ -1.48
HMGB1P3-201ENST00000502802 MPPED1O15442 326 aa5.82□□□□□ -1.48
HMGB1P3-201ENST00000502802 DOK2O60496 412 aa5.82□□□□□ -1.48
HMGB1P3-201ENST00000502802 TJP3O95049 919 aa5.82□□□□□ -1.48
HMGB1P3-201ENST00000502802 HSPA1AP0DMV8 641 aaKnown RBP5.82□□□□□ -1.48
HMGB1P3-201ENST00000502802 HSPA1BP0DMV9 641 aaKnown RBP5.82□□□□□ -1.48
HMGB1P3-201ENST00000502802 ITGAMP11215 1152 aa5.82□□□□□ -1.48
HMGB1P3-201ENST00000502802 MYCLP12524 364 aaPredicted RBP5.82□□□□□ -1.48
HMGB1P3-201ENST00000502802 DUSP1P28562 367 aa5.82□□□□□ -1.48
HMGB1P3-201ENST00000502802 STAT1P42224 750 aa5.82□□□□□ -1.48
HMGB1P3-201ENST00000502802 DIO1P49895 249 aa5.82□□□□□ -1.48
HMGB1P3-201ENST00000502802 ARF3P61204 181 aaPredicted RBP5.82□□□□□ -1.48
HMGB1P3-201ENST00000502802 ARF1P84077 181 aaKnown RBP5.82□□□□□ -1.48
HMGB1P3-201ENST00000502802 SETQ01105 290 aaPredicted RBP5.82□□□□□ -1.48
HMGB1P3-201ENST00000502802 GOLGA8FQ08AF8 430 aa5.82□□□□□ -1.48
HMGB1P3-201ENST00000502802 FZD5Q13467 585 aa5.82□□□□□ -1.48
HMGB1P3-201ENST00000502802 TDGQ13569 410 aa5.82□□□□□ -1.48
HMGB1P3-201ENST00000502802 CCNG2Q16589 344 aa5.82□□□□□ -1.48
HMGB1P3-201ENST00000502802 TBC1D25Q3MII6 688 aa5.82□□□□□ -1.48
HMGB1P3-201ENST00000502802 RUNDC3AQ59EK9 446 aa5.82□□□□□ -1.48
HMGB1P3-201ENST00000502802 ZNF280DQ6N043 979 aa5.82□□□□□ -1.48
HMGB1P3-201ENST00000502802 INO80CQ6PI98 192 aaPredicted RBP5.82□□□□□ -1.48
HMGB1P3-201ENST00000502802 SLC22A25Q6T423 547 aa5.82□□□□□ -1.48
HMGB1P3-201ENST00000502802 MTHFD1LQ6UB35 978 aa5.82□□□□□ -1.48
HMGB1P3-201ENST00000502802 ATF7IPQ6VMQ6 1270 aa5.82□□□□□ -1.48
HMGB1P3-201ENST00000502802 C1orf210Q8IVY1 113 aa5.82□□□□□ -1.48
HMGB1P3-201ENST00000502802 DIS3L2Q8IYB7 885 aaKnown RBP5.82□□□□□ -1.48
HMGB1P3-201ENST00000502802 IL17DQ8TAD2 202 aa5.82□□□□□ -1.48
HMGB1P3-201ENST00000502802 ASB10Q8WXI3 467 aa5.82□□□□□ -1.48
HMGB1P3-201ENST00000502802 SH3KBP1Q96B97 665 aa5.82□□□□□ -1.48
HMGB1P3-201ENST00000502802 LOXL4Q96JB6 756 aa5.82□□□□□ -1.48
HMGB1P3-201ENST00000502802 CD180Q99467 661 aa5.82□□□□□ -1.48
HMGB1P3-201ENST00000502802 ELOVL1Q9BW60 279 aa5.82□□□□□ -1.48
HMGB1P3-201ENST00000502802 USP44Q9H0E7 712 aa5.82□□□□□ -1.48
HMGB1P3-201ENST00000502802 USP29Q9HBJ7 922 aa5.82□□□□□ -1.48
HMGB1P3-201ENST00000502802 VEZTQ9HBM0 779 aa5.82□□□□□ -1.48
HMGB1P3-201ENST00000502802 TLR8Q9NR97 1041 aaKnown RBP5.82□□□□□ -1.48
HMGB1P3-201ENST00000502802 THAP1Q9NVV9 213 aa5.82□□□□□ -1.48
HMGB1P3-201ENST00000502802 PPP1R14DQ9NXH3 145 aa5.82□□□□□ -1.48
HMGB1P3-201ENST00000502802 ALKBH4Q9NXW9 302 aa5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms