RNA–Protein interactions for RNA: ENST00000502781.5

LSM6-202, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM6, Length 1,352 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-202ENST00000502781 PANX2Q96RD6 677 aa26.05■■□□□ 1.76
LSM6-202ENST00000502781 DDX50Q9BQ39 737 aaKnown RBP26.05■■□□□ 1.76
LSM6-202ENST00000502781 SLC12A6Q9UHW9 1150 aa26.05■■□□□ 1.76
LSM6-202ENST00000502781 PAXBP1Q9Y5B6 917 aa26.05■■□□□ 1.76
LSM6-202ENST00000502781 ZNF318Q5VUA4 2279 aa26.04■■□□□ 1.76
LSM6-202ENST00000502781 A0A0A0MRY4 1105 aa26.04■■□□□ 1.76
LSM6-202ENST00000502781 NCAM2O15394 837 aa26.04■■□□□ 1.76
LSM6-202ENST00000502781 TULP3O75386 442 aa26.04■■□□□ 1.76
LSM6-202ENST00000502781 MESP2Q0VG99 397 aa26.04■■□□□ 1.76
LSM6-202ENST00000502781 GRSF1Q12849 480 aaKnown RBP eCLIP26.04■■□□□ 1.76
LSM6-202ENST00000502781 MPPE1Q53F39 396 aa26.04■■□□□ 1.76
LSM6-202ENST00000502781 SH3PXD2AQ5TCZ1 1133 aa26.04■■□□□ 1.76
LSM6-202ENST00000502781 RFWD3Q6PCD5 774 aa26.04■■□□□ 1.76
LSM6-202ENST00000502781 DCUN1D2Q6PH85 259 aa26.04■■□□□ 1.76
LSM6-202ENST00000502781 EZH1Q92800 747 aaPredicted RBP26.04■■□□□ 1.76
LSM6-202ENST00000502781 TMA16Q96EY4 203 aaKnown RBP26.04■■□□□ 1.76
LSM6-202ENST00000502781 CCDC42Q96M95 316 aa26.04■■□□□ 1.76
LSM6-202ENST00000502781 PRMT1Q99873 361 aaKnown RBP26.04■■□□□ 1.76
LSM6-202ENST00000502781 THAP2Q9H0W7 228 aa26.04■■□□□ 1.76
LSM6-202ENST00000502781 DEF6Q9H4E7 631 aa26.04■■□□□ 1.76
LSM6-202ENST00000502781 WDCPQ9H6R7 721 aa26.04■■□□□ 1.76
LSM6-202ENST00000502781 ANLNQ9NQW6 1124 aa26.04■■□□□ 1.76
LSM6-202ENST00000502781 IMPACTQ9P2X3 320 aa26.04■■□□□ 1.76
LSM6-202ENST00000502781 SCINQ9Y6U3 715 aa26.04■■□□□ 1.76
LSM6-202ENST00000502781 ANKRD62A6NC57 917 aa26.03■■□□□ 1.76
LSM6-202ENST00000502781 TMEM191CA6NGB0 347 aa26.03■■□□□ 1.76
LSM6-202ENST00000502781 PALM2-AKAP2B1ALY0 433 aaPredicted RBP26.03■■□□□ 1.76
LSM6-202ENST00000502781 CYBBP04839 570 aa26.03■■□□□ 1.76
LSM6-202ENST00000502781 CYP1A2P05177 515 aa26.03■■□□□ 1.76
LSM6-202ENST00000502781 DCNP07585 359 aaKnown RBP26.03■■□□□ 1.76
LSM6-202ENST00000502781 DRD1P21728 446 aa26.03■■□□□ 1.76
LSM6-202ENST00000502781 HOXD9P28356 352 aaPredicted RBP26.03■■□□□ 1.76
LSM6-202ENST00000502781 OGDHQ02218 1023 aa26.03■■□□□ 1.76
LSM6-202ENST00000502781 RAB6CQ53S08 254 aa26.03■■□□□ 1.76
LSM6-202ENST00000502781 MS4A13Q5J8X5 152 aa26.03■■□□□ 1.76
LSM6-202ENST00000502781 DGKKQ5KSL6 1271 aa26.03■■□□□ 1.76
LSM6-202ENST00000502781 MPP7Q5T2T1 576 aa26.03■■□□□ 1.76
LSM6-202ENST00000502781 SND1Q7KZF4 910 aaKnown RBP eCLIP26.03■■□□□ 1.76
LSM6-202ENST00000502781 NAT16Q8N8M0 369 aa26.03■■□□□ 1.76
LSM6-202ENST00000502781 FNIP1Q8TF40 1166 aa26.03■■□□□ 1.76
LSM6-202ENST00000502781 PRICKLE1Q96MT3 831 aaPredicted RBP26.03■■□□□ 1.76
LSM6-202ENST00000502781 XPO6Q96QU8 1125 aaKnown RBP26.03■■□□□ 1.76
LSM6-202ENST00000502781 PNKPQ96T60 521 aa26.03■■□□□ 1.76
LSM6-202ENST00000502781 CNPY3Q9BT09 278 aa26.03■■□□□ 1.76
LSM6-202ENST00000502781 RAB6CQ9H0N0 254 aa26.03■■□□□ 1.76
LSM6-202ENST00000502781 PLK2Q9NYY3 685 aa26.03■■□□□ 1.76
LSM6-202ENST00000502781 AKR1B10O60218 316 aa26.02■■□□□ 1.76
LSM6-202ENST00000502781 PAGE1O75459 146 aa26.02■■□□□ 1.76
LSM6-202ENST00000502781 MAGEA9P43362 315 aa26.02■■□□□ 1.76
LSM6-202ENST00000502781 GALCP54803 685 aa26.02■■□□□ 1.76
LSM6-202ENST00000502781 HDAC4P56524 1084 aa26.02■■□□□ 1.76
LSM6-202ENST00000502781 SYNPOQ8N3V7 929 aa26.02■■□□□ 1.76
LSM6-202ENST00000502781 BHMTQ93088 406 aa26.02■■□□□ 1.76
LSM6-202ENST00000502781 MYEOVQ96EZ4 313 aa26.02■■□□□ 1.76
LSM6-202ENST00000502781 TKTL2Q9H0I9 626 aa26.02■■□□□ 1.76
LSM6-202ENST00000502781 LMAN1LQ9HAT1 526 aa26.02■■□□□ 1.76
LSM6-202ENST00000502781 MRPL47Q9HD33 250 aaKnown RBP26.02■■□□□ 1.76
LSM6-202ENST00000502781 DEC1Q9P2X7 70 aa26.02■■□□□ 1.76
LSM6-202ENST00000502781 CCP110O43303 1012 aa26.01■■□□□ 1.75
LSM6-202ENST00000502781 TSPAN3O60637 253 aa26.01■■□□□ 1.75
LSM6-202ENST00000502781 EGFP01133 1207 aa26.01■■□□□ 1.75
LSM6-202ENST00000502781 CISD3P0C7P0 127 aa26.01■■□□□ 1.75
LSM6-202ENST00000502781 TACR2P21452 398 aa26.01■■□□□ 1.75
LSM6-202ENST00000502781 SGSHP51688 502 aa26.01■■□□□ 1.75
LSM6-202ENST00000502781 LRRC32Q14392 662 aa26.01■■□□□ 1.75
LSM6-202ENST00000502781 CDO1Q16878 200 aa26.01■■□□□ 1.75
LSM6-202ENST00000502781 FAM131BQ86XD5 332 aa26.01■■□□□ 1.75
LSM6-202ENST00000502781 DDI1Q8WTU0 396 aa26.01■■□□□ 1.75
LSM6-202ENST00000502781 FAM172AQ8WUF8 416 aa26.01■■□□□ 1.75
LSM6-202ENST00000502781 TRIM7Q9C029 511 aa26.01■■□□□ 1.75
LSM6-202ENST00000502781 CHRDQ9H2X0 955 aa26.01■■□□□ 1.75
LSM6-202ENST00000502781 MYO1AQ9UBC5 1043 aa26.01■■□□□ 1.75
LSM6-202ENST00000502781 HS3ST4Q9Y661 456 aa26.01■■□□□ 1.75
LSM6-202ENST00000502781 KAT7O95251 611 aa26■■□□□ 1.75
LSM6-202ENST00000502781 GRIA2P42262 883 aa26■■□□□ 1.75
LSM6-202ENST00000502781 ZNF252P-AS1Q0IIN9 211 aa26■■□□□ 1.75
LSM6-202ENST00000502781 FBXO43Q4G163 708 aa26■■□□□ 1.75
LSM6-202ENST00000502781 RAP1GAP2Q684P5 730 aa26■■□□□ 1.75
LSM6-202ENST00000502781 CHSY1Q86X52 802 aa26■■□□□ 1.75
LSM6-202ENST00000502781 SLC2A11Q9BYW1 496 aa26■■□□□ 1.75
LSM6-202ENST00000502781 RBM12Q9NTZ6 932 aaKnown RBP26■■□□□ 1.75
LSM6-202ENST00000502781 SPTLC3Q9NUV7 552 aa26■■□□□ 1.75
LSM6-202ENST00000502781 DNAJC17Q9NVM6 304 aaKnown RBP26■■□□□ 1.75
LSM6-202ENST00000502781 CLEC4EQ9ULY5 219 aa26■■□□□ 1.75
LSM6-202ENST00000502781 SLC27A6Q9Y2P4 619 aa26■■□□□ 1.75
LSM6-202ENST00000502781 TRIM24O15164 1050 aa25.99■■□□□ 1.75
LSM6-202ENST00000502781 ACBD5Q5T8D3 534 aaPredicted RBP25.99■■□□□ 1.75
LSM6-202ENST00000502781 TERB1Q8NA31 727 aa25.99■■□□□ 1.75
LSM6-202ENST00000502781 HJURPQ8NCD3 748 aaPredicted RBP25.99■■□□□ 1.75
LSM6-202ENST00000502781 ARHGEF26Q96DR7 871 aa25.99■■□□□ 1.75
LSM6-202ENST00000502781 C1orf74Q96LT6 269 aa25.99■■□□□ 1.75
LSM6-202ENST00000502781 PACSIN1Q9BY11 444 aa25.99■■□□□ 1.75
LSM6-202ENST00000502781 ARHGEF4Q9NR80 690 aa25.99■■□□□ 1.75
LSM6-202ENST00000502781 K7EQS6 105 aa25.98■■□□□ 1.75
LSM6-202ENST00000502781 CHRM1P11229 460 aaPredicted RBP25.98■■□□□ 1.75
LSM6-202ENST00000502781 ADRA1BP35368 520 aa25.98■■□□□ 1.75
LSM6-202ENST00000502781 DGKGP49619 791 aa25.98■■□□□ 1.75
LSM6-202ENST00000502781 NUBP1P53384 320 aa25.98■■□□□ 1.75
LSM6-202ENST00000502781 RPS24P62847 133 aaKnown RBP25.98■■□□□ 1.75
LSM6-202ENST00000502781 AUHQ13825 339 aaKnown RBP25.98■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms