RNA–Protein interactions for RNA: ENST00000498212.1

HMGXB4-207, Transcript of HMG-box containing 4, humanhuman

TSL 3

Gene HMGXB4, Length 778 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-207ENST00000498212 PAPSS1O43252 624 aaPredicted RBP8.81□□□□□ -1
HMGXB4-207ENST00000498212 TIMM44O43615 452 aa8.81□□□□□ -1
HMGXB4-207ENST00000498212 SYNCRIPO60506 623 aaKnown RBP8.81□□□□□ -1
HMGXB4-207ENST00000498212 TBL1XO60907 577 aa8.81□□□□□ -1
HMGXB4-207ENST00000498212 EPHX1P07099 455 aa8.81□□□□□ -1
HMGXB4-207ENST00000498212 PRKCSHP14314 528 aaPredicted RBP8.81□□□□□ -1
HMGXB4-207ENST00000498212 HLA-FP30511 346 aa8.81□□□□□ -1
HMGXB4-207ENST00000498212 SLC6A4P31645 630 aa8.81□□□□□ -1
HMGXB4-207ENST00000498212 DPP6P42658 865 aa8.81□□□□□ -1
HMGXB4-207ENST00000498212 PTGER3P43115 390 aa8.81□□□□□ -1
HMGXB4-207ENST00000498212 SGSHP51688 502 aa8.81□□□□□ -1
HMGXB4-207ENST00000498212 PTK2Q05397 1052 aa8.81□□□□□ -1
HMGXB4-207ENST00000498212 PDCLQ13371 301 aa8.81□□□□□ -1
HMGXB4-207ENST00000498212 FUT11Q495W5 492 aa8.81□□□□□ -1
HMGXB4-207ENST00000498212 VWA3BQ502W6 1294 aa8.81□□□□□ -1
HMGXB4-207ENST00000498212 HSP90AA4PQ58FG1 418 aa8.81□□□□□ -1
HMGXB4-207ENST00000498212 FAM133BQ5BKY9 247 aaKnown RBP8.81□□□□□ -1
HMGXB4-207ENST00000498212 PPM1JQ5JR12 505 aa8.81□□□□□ -1
HMGXB4-207ENST00000498212 MIIPQ5JXC2 388 aa8.81□□□□□ -1
HMGXB4-207ENST00000498212 MPP7Q5T2T1 576 aa8.81□□□□□ -1
HMGXB4-207ENST00000498212 PIK3R6Q5UE93 754 aa8.81□□□□□ -1
HMGXB4-207ENST00000498212 SYPL2Q5VXT5 272 aa8.81□□□□□ -1
HMGXB4-207ENST00000498212 LYSMD4Q5XG99 296 aa8.81□□□□□ -1
HMGXB4-207ENST00000498212 TMEM215Q68D42 235 aa8.81□□□□□ -1
HMGXB4-207ENST00000498212 SMYD5Q6GMV2 418 aa8.81□□□□□ -1
HMGXB4-207ENST00000498212 RFWD3Q6PCD5 774 aa8.81□□□□□ -1
HMGXB4-207ENST00000498212 KIAA1324Q6UXG2 1013 aaKnown RBP8.81□□□□□ -1
HMGXB4-207ENST00000498212 CHST9Q7L1S5 443 aa8.81□□□□□ -1
HMGXB4-207ENST00000498212 TMEM110Q86TL2 294 aa8.81□□□□□ -1
HMGXB4-207ENST00000498212 TAC4Q86UU9 113 aa8.81□□□□□ -1
HMGXB4-207ENST00000498212 SYT12Q8IV01 421 aa8.81□□□□□ -1
HMGXB4-207ENST00000498212 AHI1Q8N157 1196 aa8.81□□□□□ -1
HMGXB4-207ENST00000498212 ADAM32Q8TC27 787 aa8.81□□□□□ -1
HMGXB4-207ENST00000498212 WFIKKN2Q8TEU8 576 aa8.81□□□□□ -1
HMGXB4-207ENST00000498212 SORCS1Q8WY21 1168 aa8.81□□□□□ -1
HMGXB4-207ENST00000498212 AZIN2Q96A70 460 aa8.81□□□□□ -1
HMGXB4-207ENST00000498212 FCRL2Q96LA5 508 aaPredicted RBP8.81□□□□□ -1
HMGXB4-207ENST00000498212 DDX50Q9BQ39 737 aaKnown RBP8.81□□□□□ -1
HMGXB4-207ENST00000498212 NUSAP1Q9BXS6 441 aaKnown RBP8.81□□□□□ -1
HMGXB4-207ENST00000498212 SLC6A17Q9H1V8 727 aa8.81□□□□□ -1
HMGXB4-207ENST00000498212 PRDM16Q9HAZ2 1276 aa8.81□□□□□ -1
HMGXB4-207ENST00000498212 POPDC2Q9HBU9 364 aa8.81□□□□□ -1
HMGXB4-207ENST00000498212 SIX2Q9NPC8 291 aa8.81□□□□□ -1
HMGXB4-207ENST00000498212 LMBRD1Q9NUN5 540 aa8.81□□□□□ -1
HMGXB4-207ENST00000498212 ABCB8Q9NUT2 735 aa8.81□□□□□ -1
HMGXB4-207ENST00000498212 EVLQ9UI08 416 aaPredicted RBP8.81□□□□□ -1
HMGXB4-207ENST00000498212 GGA2Q9UJY4 613 aa8.81□□□□□ -1
HMGXB4-207ENST00000498212 DNAJC12Q9UKB3 198 aa8.81□□□□□ -1
HMGXB4-207ENST00000498212 AJAP1Q9UKB5 411 aaPredicted RBP8.81□□□□□ -1
HMGXB4-207ENST00000498212 PCDHGC3Q9UN70 934 aa8.81□□□□□ -1
HMGXB4-207ENST00000498212 CYP8B1Q9UNU6 501 aa8.81□□□□□ -1
HMGXB4-207ENST00000498212 ATXN2Q99700 1313 aaKnown RBP8.8□□□□□ -1
HMGXB4-207ENST00000498212 KCNJ18B7U540 433 aa8.8□□□□□ -1
HMGXB4-207ENST00000498212 PES1O00541 588 aaKnown RBP8.8□□□□□ -1
HMGXB4-207ENST00000498212 TM4SF5O14894 197 aa8.8□□□□□ -1
HMGXB4-207ENST00000498212 NDUFS2O75306 463 aa8.8□□□□□ -1
HMGXB4-207ENST00000498212 MOCS2O96007 188 aaPredicted RBP8.8□□□□□ -1
HMGXB4-207ENST00000498212 APOEP02649 317 aa8.8□□□□□ -1
HMGXB4-207ENST00000498212 PABPC1P11940 636 aaKnown RBP8.8□□□□□ -1
HMGXB4-207ENST00000498212 ITPKAP23677 461 aa8.8□□□□□ -1
HMGXB4-207ENST00000498212 PRKCHP24723 683 aa8.8□□□□□ -1
HMGXB4-207ENST00000498212 KRT9P35527 623 aa8.8□□□□□ -1
HMGXB4-207ENST00000498212 YWHAZP63104 245 aaKnown RBP8.8□□□□□ -1
HMGXB4-207ENST00000498212 IRX4P78413 519 aa8.8□□□□□ -1
HMGXB4-207ENST00000498212 ZNF33AQ06730 810 aa8.8□□□□□ -1
HMGXB4-207ENST00000498212 KCNJ12Q14500 433 aa8.8□□□□□ -1
HMGXB4-207ENST00000498212 FNDC3BQ53EP0 1204 aaKnown RBP8.8□□□□□ -1
HMGXB4-207ENST00000498212 TRIM61Q5EBN2 209 aa8.8□□□□□ -1
HMGXB4-207ENST00000498212 CT47A1Q5JQC4 288 aaPredicted RBP8.8□□□□□ -1
HMGXB4-207ENST00000498212 PEAR1Q5VY43 1037 aaPredicted RBP8.8□□□□□ -1
HMGXB4-207ENST00000498212 NADSYN1Q6IA69 706 aa8.8□□□□□ -1
HMGXB4-207ENST00000498212 SERPINA13PQ6UXR4 307 aa8.8□□□□□ -1
HMGXB4-207ENST00000498212 KIAA0907Q7Z7F0 614 aaPredicted RBP8.8□□□□□ -1
HMGXB4-207ENST00000498212 METTL3Q86U44 580 aaKnown RBP8.8□□□□□ -1
HMGXB4-207ENST00000498212 PASD1Q8IV76 773 aa8.8□□□□□ -1
HMGXB4-207ENST00000498212 MFN1Q8IWA4 741 aa8.8□□□□□ -1
HMGXB4-207ENST00000498212 DEFB119Q8N690 84 aa8.8□□□□□ -1
HMGXB4-207ENST00000498212 DDX51Q8N8A6 666 aaKnown RBP eCLIP8.8□□□□□ -1
HMGXB4-207ENST00000498212 ZNF557Q8N988 423 aaPredicted RBP8.8□□□□□ -1
HMGXB4-207ENST00000498212 HJURPQ8NCD3 748 aaPredicted RBP8.8□□□□□ -1
HMGXB4-207ENST00000498212 WFDC5Q8TCV5 224 aa8.8□□□□□ -1
HMGXB4-207ENST00000498212 PRCCQ92733 491 aaPredicted RBP8.8□□□□□ -1
HMGXB4-207ENST00000498212 SLC39A13Q96H72 371 aa8.8□□□□□ -1
HMGXB4-207ENST00000498212 PRICKLE1Q96MT3 831 aaPredicted RBP8.8□□□□□ -1
HMGXB4-207ENST00000498212 CPXM1Q96SM3 734 aa8.8□□□□□ -1
HMGXB4-207ENST00000498212 MKRN2Q9H000 416 aaKnown RBP8.8□□□□□ -1
HMGXB4-207ENST00000498212 LHX5Q9H2C1 402 aa8.8□□□□□ -1
HMGXB4-207ENST00000498212 CD93Q9NPY3 652 aa8.8□□□□□ -1
HMGXB4-207ENST00000498212 TMEM74BQ9NUR3 256 aa8.8□□□□□ -1
HMGXB4-207ENST00000498212 STIM2Q9P246 746 aa8.8□□□□□ -1
HMGXB4-207ENST00000498212 USP36Q9P275 1121 aaKnown RBP8.8□□□□□ -1
HMGXB4-207ENST00000498212 TJP2Q9UDY2 1190 aa8.8□□□□□ -1
HMGXB4-207ENST00000498212 PLA2G4CQ9UP65 541 aa8.8□□□□□ -1
HMGXB4-207ENST00000498212 CEP83Q9Y592 693 aa8.8□□□□□ -1
HMGXB4-207ENST00000498212 DOCK4Q8N1I0 1966 aa8.79□□□□□ -1
HMGXB4-207ENST00000498212 TMEM131Q92545 1883 aa8.79□□□□□ -1
HMGXB4-207ENST00000498212 C4orf47A7E2U8 309 aa8.79□□□□□ -1
HMGXB4-207ENST00000498212 FOXN3O00409 490 aaPredicted RBP8.79□□□□□ -1
HMGXB4-207ENST00000498212 CDX4O14627 284 aaPredicted RBP8.79□□□□□ -1
HMGXB4-207ENST00000498212 TRUB2O95900 331 aaKnown RBP8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms