RNA–Protein interactions for RNA: ENST00000498090.1

AFF3-215, Transcript of AF4/FMR2 family member 3, humanhuman

TSL 2

Gene AFF3, Length 1,673 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFF3-215ENST00000498090 SLC17A7Q9P2U7 560 aa12.84□□□□□ -0.35
AFF3-215ENST00000498090 ZC3H7BQ9UGR2 993 aaKnown RBP12.84□□□□□ -0.35
AFF3-215ENST00000498090 TRIM33Q9UPN9 1127 aa12.84□□□□□ -0.35
AFF3-215ENST00000498090 L3MBTL1Q9Y468 752 aa12.84□□□□□ -0.35
AFF3-215ENST00000498090 I3L4J1 428 aa12.83□□□□□ -0.35
AFF3-215ENST00000498090 KIF1CO43896 1103 aaKnown RBP12.83□□□□□ -0.35
AFF3-215ENST00000498090 GCATO75600 419 aa12.83□□□□□ -0.35
AFF3-215ENST00000498090 NEFHP12036 1026 aa12.83□□□□□ -0.35
AFF3-215ENST00000498090 SERPINB4P48594 390 aa12.83□□□□□ -0.35
AFF3-215ENST00000498090 CLNS1AP54105 237 aaKnown RBP12.83□□□□□ -0.35
AFF3-215ENST00000498090 MMRN1Q13201 1228 aa12.83□□□□□ -0.35
AFF3-215ENST00000498090 CTC1Q2NKJ3 1217 aa12.83□□□□□ -0.35
AFF3-215ENST00000498090 STXBP5Q5T5C0 1151 aa12.83□□□□□ -0.35
AFF3-215ENST00000498090 ANKRD20A3Q5VUR7 823 aa12.83□□□□□ -0.35
AFF3-215ENST00000498090 ARHGAP17Q68EM7 881 aa12.83□□□□□ -0.35
AFF3-215ENST00000498090 MTDHQ86UE4 582 aaKnown RBP12.83□□□□□ -0.35
AFF3-215ENST00000498090 CCNJLQ8IV13 435 aa12.83□□□□□ -0.35
AFF3-215ENST00000498090 VPS52Q8N1B4 723 aa12.83□□□□□ -0.35
AFF3-215ENST00000498090 ARHGAP24Q8N264 748 aa12.83□□□□□ -0.35
AFF3-215ENST00000498090 GPATCH11Q8N954 259 aa12.83□□□□□ -0.35
AFF3-215ENST00000498090 FAM13CQ8NE31 585 aa12.83□□□□□ -0.35
AFF3-215ENST00000498090 GSTCDQ8NEC7 633 aa12.83□□□□□ -0.35
AFF3-215ENST00000498090 KIF12Q96FN5 646 aa12.83□□□□□ -0.35
AFF3-215ENST00000498090 NSL1Q96IY1 281 aa12.83□□□□□ -0.35
AFF3-215ENST00000498090 ZFP42Q96MM3 310 aa12.83□□□□□ -0.35
AFF3-215ENST00000498090 POPDC2Q9HBU9 364 aa12.83□□□□□ -0.35
AFF3-215ENST00000498090 KCNK4Q9NYG8 393 aa12.83□□□□□ -0.35
AFF3-215ENST00000498090 TUBGCP4Q9UGJ1 667 aa12.83□□□□□ -0.35
AFF3-215ENST00000498090 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.83□□□□□ -0.36
AFF3-215ENST00000498090 HACD1B0YJ81 288 aa12.83□□□□□ -0.36
AFF3-215ENST00000498090 BIRC5O15392 142 aa12.83□□□□□ -0.36
AFF3-215ENST00000498090 DIAPH2O60879 1101 aa12.83□□□□□ -0.36
AFF3-215ENST00000498090 PARNO95453 639 aaKnown RBP12.83□□□□□ -0.36
AFF3-215ENST00000498090 TIMP1P01033 207 aa12.83□□□□□ -0.36
AFF3-215ENST00000498090 APOEP02649 317 aa12.83□□□□□ -0.36
AFF3-215ENST00000498090 PFKMP08237 780 aa12.83□□□□□ -0.36
AFF3-215ENST00000498090 FGFR1P11362 822 aa12.83□□□□□ -0.36
AFF3-215ENST00000498090 MLNP12872 115 aa12.83□□□□□ -0.36
AFF3-215ENST00000498090 KCNE1P15382 129 aa12.83□□□□□ -0.36
AFF3-215ENST00000498090 IL4RP24394 825 aa12.83□□□□□ -0.36
AFF3-215ENST00000498090 MLH1P40692 756 aa12.83□□□□□ -0.36
AFF3-215ENST00000498090 MAGEA3P43357 314 aa12.83□□□□□ -0.36
AFF3-215ENST00000498090 ACADSBP45954 432 aa12.83□□□□□ -0.36
AFF3-215ENST00000498090 FAM189BP81408 668 aa12.83□□□□□ -0.36
AFF3-215ENST00000498090 ORC1Q13415 861 aa12.83□□□□□ -0.36
AFF3-215ENST00000498090 NAB1Q13506 487 aa12.83□□□□□ -0.36
AFF3-215ENST00000498090 TBCCQ15814 346 aa12.83□□□□□ -0.36
AFF3-215ENST00000498090 ZBTB6Q15916 424 aa12.83□□□□□ -0.36
AFF3-215ENST00000498090 DPYSL2Q16555 572 aa12.83□□□□□ -0.36
AFF3-215ENST00000498090 ACCSLQ4AC99 568 aa12.83□□□□□ -0.36
AFF3-215ENST00000498090 C1orf228Q6PIY5 440 aa12.83□□□□□ -0.36
AFF3-215ENST00000498090 NPNTQ6UXI9 565 aa12.83□□□□□ -0.36
AFF3-215ENST00000498090 TIFABQ6ZNK6 161 aa12.83□□□□□ -0.36
AFF3-215ENST00000498090 PSTKQ8IV42 348 aaKnown RBP12.83□□□□□ -0.36
AFF3-215ENST00000498090 IGDCC3Q8IVU1 814 aa12.83□□□□□ -0.36
AFF3-215ENST00000498090 TEX9Q8N6V9 391 aa12.83□□□□□ -0.36
AFF3-215ENST00000498090 PQLC3Q8N755 202 aa12.83□□□□□ -0.36
AFF3-215ENST00000498090 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.83□□□□□ -0.36
AFF3-215ENST00000498090 RNF169Q8NCN4 708 aa12.83□□□□□ -0.36
AFF3-215ENST00000498090 GSDMBQ8TAX9 411 aa12.83□□□□□ -0.36
AFF3-215ENST00000498090 FAM172AQ8WUF8 416 aa12.83□□□□□ -0.36
AFF3-215ENST00000498090 SLC35F5Q8WV83 523 aa12.83□□□□□ -0.36
AFF3-215ENST00000498090 C18orf25Q96B23 403 aaPredicted RBP12.83□□□□□ -0.36
AFF3-215ENST00000498090 SKA1Q96BD8 255 aa12.83□□□□□ -0.36
AFF3-215ENST00000498090 SERAC1Q96JX3 654 aa12.83□□□□□ -0.36
AFF3-215ENST00000498090 GAD1Q99259 594 aa12.83□□□□□ -0.36
AFF3-215ENST00000498090 FERMT1Q9BQL6 677 aa12.83□□□□□ -0.36
AFF3-215ENST00000498090 BTBD10Q9BSF8 475 aa12.83□□□□□ -0.36
AFF3-215ENST00000498090 FTHL17Q9BXU8 183 aa12.83□□□□□ -0.36
AFF3-215ENST00000498090 DCLRE1BQ9H816 532 aa12.83□□□□□ -0.36
AFF3-215ENST00000498090 MIOSQ9NXC5 875 aa12.83□□□□□ -0.36
AFF3-215ENST00000498090 RCOR3Q9P2K3 495 aaPredicted RBP12.83□□□□□ -0.36
AFF3-215ENST00000498090 PLLPQ9Y342 182 aa12.83□□□□□ -0.36
AFF3-215ENST00000498090 TTLL3Q9Y4R7 772 aa12.83□□□□□ -0.36
AFF3-215ENST00000498090 RANBP2P49792 3224 aaKnown RBP12.82□□□□□ -0.36
AFF3-215ENST00000498090 SMIM28A0A1B0GU29 152 aa12.82□□□□□ -0.36
AFF3-215ENST00000498090 ENPP3O14638 875 aa12.82□□□□□ -0.36
AFF3-215ENST00000498090 HGSO14964 777 aaPredicted RBP12.82□□□□□ -0.36
AFF3-215ENST00000498090 C1QAP02745 245 aa12.82□□□□□ -0.36
AFF3-215ENST00000498090 DLDP09622 509 aaKnown RBP12.82□□□□□ -0.36
AFF3-215ENST00000498090 PYGBP11216 843 aa12.82□□□□□ -0.36
AFF3-215ENST00000498090 RBL1P28749 1068 aa12.82□□□□□ -0.36
AFF3-215ENST00000498090 FDFT1P37268 417 aa12.82□□□□□ -0.36
AFF3-215ENST00000498090 ZBTB16Q05516 673 aa12.82□□□□□ -0.36
AFF3-215ENST00000498090 SOX4Q06945 474 aaPredicted RBP12.82□□□□□ -0.36
AFF3-215ENST00000498090 C15orf59Q2T9L4 293 aaPredicted RBP12.82□□□□□ -0.36
AFF3-215ENST00000498090 ANKRD20A2Q5SQ80 823 aa12.82□□□□□ -0.36
AFF3-215ENST00000498090 ANKRD20A1Q5TYW2 823 aa12.82□□□□□ -0.36
AFF3-215ENST00000498090 TRNP1Q6NT89 227 aa12.82□□□□□ -0.36
AFF3-215ENST00000498090 SCYL2Q6P3W7 929 aa12.82□□□□□ -0.36
AFF3-215ENST00000498090 ZNF449Q6P9G9 518 aa12.82□□□□□ -0.36
AFF3-215ENST00000498090 SLC24A5Q71RS6 500 aa12.82□□□□□ -0.36
AFF3-215ENST00000498090 SLC26A9Q7LBE3 791 aa12.82□□□□□ -0.36
AFF3-215ENST00000498090 PCDH19Q8TAB3 1148 aa12.82□□□□□ -0.36
AFF3-215ENST00000498090 CENPIQ92674 756 aaPredicted RBP12.82□□□□□ -0.36
AFF3-215ENST00000498090 THOC1Q96FV9 657 aaKnown RBP12.82□□□□□ -0.36
AFF3-215ENST00000498090 FAM111AQ96PZ2 611 aa12.82□□□□□ -0.36
AFF3-215ENST00000498090 SRPK1Q96SB4 655 aaKnown RBP12.82□□□□□ -0.36
AFF3-215ENST00000498090 SNRNP25Q9BV90 132 aaKnown RBP12.82□□□□□ -0.36
AFF3-215ENST00000498090 NRDE2Q9H7Z3 1164 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms