RNA–Protein interactions for RNA: ENST00000498058.1

PRKCB-209, Transcript of protein kinase C beta, humanhuman

TSL 3 BASIC

Gene PRKCB, Length 480 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-209ENST00000498058 TMEM245Q9H330 911 aa19.33■□□□□ 0.68
PRKCB-209ENST00000498058 OLA1Q9NTK5 396 aaKnown RBP19.33■□□□□ 0.68
PRKCB-209ENST00000498058 HESX1Q9UBX0 185 aa19.33■□□□□ 0.68
PRKCB-209ENST00000498058 KNL1Q8NG31 2342 aa19.33■□□□□ 0.68
PRKCB-209ENST00000498058 METTL12A8MUP2 240 aa19.32■□□□□ 0.68
PRKCB-209ENST00000498058 SYNCRIPO60506 623 aaKnown RBP19.32■□□□□ 0.68
PRKCB-209ENST00000498058 SYPP08247 313 aa19.32■□□□□ 0.68
PRKCB-209ENST00000498058 SETSIPP0DME0 302 aa19.32■□□□□ 0.68
PRKCB-209ENST00000498058 BMP6P22004 513 aa19.32■□□□□ 0.68
PRKCB-209ENST00000498058 BRD2P25440 801 aaKnown RBP19.32■□□□□ 0.68
PRKCB-209ENST00000498058 SLC6A4P31645 630 aa19.32■□□□□ 0.68
PRKCB-209ENST00000498058 HARS2P49590 506 aaKnown RBP19.32■□□□□ 0.68
PRKCB-209ENST00000498058 LRRC63Q05C16 580 aa19.32■□□□□ 0.68
PRKCB-209ENST00000498058 CAMK2GQ13555 558 aaPredicted RBP19.32■□□□□ 0.68
PRKCB-209ENST00000498058 WDR45BQ5MNZ6 344 aa19.32■□□□□ 0.68
PRKCB-209ENST00000498058 CCDC183Q5T5S1 534 aa19.32■□□□□ 0.68
PRKCB-209ENST00000498058 MSANTD2Q6P1R3 559 aa19.32■□□□□ 0.68
PRKCB-209ENST00000498058 RFWD3Q6PCD5 774 aa19.32■□□□□ 0.68
PRKCB-209ENST00000498058 SERPINA13PQ6UXR4 307 aa19.32■□□□□ 0.68
PRKCB-209ENST00000498058 CHST9Q7L1S5 443 aa19.32■□□□□ 0.68
PRKCB-209ENST00000498058 SIX6OS1Q8N1H7 587 aa19.32■□□□□ 0.68
PRKCB-209ENST00000498058 CHCHD4Q8N4Q1 142 aa19.32■□□□□ 0.68
PRKCB-209ENST00000498058 C1orf216Q8TAB5 229 aa19.32■□□□□ 0.68
PRKCB-209ENST00000498058 RNF139Q8WU17 664 aa19.32■□□□□ 0.68
PRKCB-209ENST00000498058 PRCCQ92733 491 aaPredicted RBP19.32■□□□□ 0.68
PRKCB-209ENST00000498058 SMARCE1Q969G3 411 aa19.32■□□□□ 0.68
PRKCB-209ENST00000498058 MYEOVQ96EZ4 313 aa19.32■□□□□ 0.68
PRKCB-209ENST00000498058 IL21RQ9HBE5 538 aa19.32■□□□□ 0.68
PRKCB-209ENST00000498058 CNGB3Q9NQW8 809 aa19.32■□□□□ 0.68
PRKCB-209ENST00000498058 ABCC13Q9NSE7 274 aa19.32■□□□□ 0.68
PRKCB-209ENST00000498058 ABCB8Q9NUT2 735 aa19.32■□□□□ 0.68
PRKCB-209ENST00000498058 MAN1B1Q9UKM7 699 aa19.32■□□□□ 0.68
PRKCB-209ENST00000498058 NEUROG3Q9Y4Z2 214 aa19.32■□□□□ 0.68
PRKCB-209ENST00000498058 MEI4A8MW99 385 aa19.31■□□□□ 0.68
PRKCB-209ENST00000498058 IGLV3-27P01718 113 aa19.31■□□□□ 0.68
PRKCB-209ENST00000498058 FYNP06241 537 aa19.31■□□□□ 0.68
PRKCB-209ENST00000498058 TBXAS1P24557 533 aaPredicted RBP19.31■□□□□ 0.68
PRKCB-209ENST00000498058 YWHAEP62258 255 aaKnown RBP19.31■□□□□ 0.68
PRKCB-209ENST00000498058 FAM133BQ5BKY9 247 aaKnown RBP19.31■□□□□ 0.68
PRKCB-209ENST00000498058 ADGRF1Q5T601 910 aa19.31■□□□□ 0.68
PRKCB-209ENST00000498058 FAM124AQ86V42 546 aa19.31■□□□□ 0.68
PRKCB-209ENST00000498058 ARHGEF19Q8IW93 802 aa19.31■□□□□ 0.68
PRKCB-209ENST00000498058 DDX51Q8N8A6 666 aaKnown RBP eCLIP19.31■□□□□ 0.68
PRKCB-209ENST00000498058 CADM4Q8NFZ8 388 aa19.31■□□□□ 0.68
PRKCB-209ENST00000498058 TMA16Q96EY4 203 aaKnown RBP19.31■□□□□ 0.68
PRKCB-209ENST00000498058 MIR1-1HGQ9H1L0 117 aa19.31■□□□□ 0.68
PRKCB-209ENST00000498058 MTG2Q9H4K7 406 aa19.31■□□□□ 0.68
PRKCB-209ENST00000498058 SUSD2Q9UGT4 822 aa19.31■□□□□ 0.68
PRKCB-209ENST00000498058 WDR3Q9UNX4 943 aaKnown RBP eCLIP19.31■□□□□ 0.681e-6■■■■□ 24.5
PRKCB-209ENST00000498058 PCDHB4Q9Y5E5 795 aa19.31■□□□□ 0.68
PRKCB-209ENST00000498058 PLXNB3Q9ULL4 1909 aa19.31■□□□□ 0.68
PRKCB-209ENST00000498058 A0A1B0GTW7 788 aa19.3■□□□□ 0.68
PRKCB-209ENST00000498058 TIMM44O43615 452 aa19.3■□□□□ 0.68
PRKCB-209ENST00000498058 PAEPP09466 180 aa19.3■□□□□ 0.68
PRKCB-209ENST00000498058 C7P10643 843 aa19.3■□□□□ 0.68
PRKCB-209ENST00000498058 GNSP15586 552 aa19.3■□□□□ 0.68
PRKCB-209ENST00000498058 CD70P32970 193 aa19.3■□□□□ 0.68
PRKCB-209ENST00000498058 ACSL1P33121 698 aa19.3■□□□□ 0.68
PRKCB-209ENST00000498058 CNGA2Q16280 664 aa19.3■□□□□ 0.68
PRKCB-209ENST00000498058 PIK3R6Q5UE93 754 aa19.3■□□□□ 0.68
PRKCB-209ENST00000498058 NADSYN1Q6IA69 706 aa19.3■□□□□ 0.68
PRKCB-209ENST00000498058 TTI2Q6NXR4 508 aa19.3■□□□□ 0.68
PRKCB-209ENST00000498058 OR2T3Q8NH03 318 aa19.3■□□□□ 0.68
PRKCB-209ENST00000498058 LMLNQ96KR4 655 aa19.3■□□□□ 0.68
PRKCB-209ENST00000498058 GTPBP4Q9BZE4 634 aaKnown RBP19.3■□□□□ 0.68
PRKCB-209ENST00000498058 C6orf106Q9H6K1 298 aaPredicted RBP19.3■□□□□ 0.68
PRKCB-209ENST00000498058 EIF2B4Q9UI10 523 aaKnown RBP19.3■□□□□ 0.68
PRKCB-209ENST00000498058 GGA2Q9UJY4 613 aa19.3■□□□□ 0.68
PRKCB-209ENST00000498058 KIAA1257Q9ULG3 409 aa19.3■□□□□ 0.68
PRKCB-209ENST00000498058 MSRB2Q9Y3D2 182 aa19.3■□□□□ 0.68
PRKCB-209ENST00000498058 NFE2L3Q9Y4A8 694 aa19.3■□□□□ 0.68
PRKCB-209ENST00000498058 TMEM131Q92545 1883 aa19.3■□□□□ 0.68
PRKCB-209ENST00000498058 DMXL2Q8TDJ6 3036 aa19.3■□□□□ 0.68
PRKCB-209ENST00000498058 PPP1R3GB7ZBB8 358 aa19.29■□□□□ 0.68
PRKCB-209ENST00000498058 M0QYV0 167 aa19.29■□□□□ 0.68
PRKCB-209ENST00000498058 PMM2O15305 246 aa19.29■□□□□ 0.68
PRKCB-209ENST00000498058 LETM1O95202 739 aaPredicted RBP19.29■□□□□ 0.68
PRKCB-209ENST00000498058 LATS1O95835 1130 aa19.29■□□□□ 0.68
PRKCB-209ENST00000498058 PABPC1P11940 636 aaKnown RBP19.29■□□□□ 0.68
PRKCB-209ENST00000498058 OXTRP30559 389 aa19.29■□□□□ 0.68
PRKCB-209ENST00000498058 CAMK4Q16566 473 aa19.29■□□□□ 0.68
PRKCB-209ENST00000498058 FNDC3BQ53EP0 1204 aaKnown RBP19.29■□□□□ 0.68
PRKCB-209ENST00000498058 MBLAC2Q68D91 279 aa19.29■□□□□ 0.68
PRKCB-209ENST00000498058 CAVIN1Q6NZI2 390 aaKnown RBP19.29■□□□□ 0.68
PRKCB-209ENST00000498058 RRAGAQ7L523 313 aa19.29■□□□□ 0.68
PRKCB-209ENST00000498058 RAB44Q7Z6P3 723 aaPredicted RBP19.29■□□□□ 0.68
PRKCB-209ENST00000498058 PPM1KQ8N3J5 372 aa19.29■□□□□ 0.68
PRKCB-209ENST00000498058 PRICKLE1Q96MT3 831 aaPredicted RBP19.29■□□□□ 0.68
PRKCB-209ENST00000498058 KREMEN1Q96MU8 473 aa19.29■□□□□ 0.68
PRKCB-209ENST00000498058 NT5C1BQ96P26 610 aa19.29■□□□□ 0.68
PRKCB-209ENST00000498058 NUP58Q9BVL2 599 aa19.29■□□□□ 0.68
PRKCB-209ENST00000498058 PRSS16Q9NQE7 514 aa19.29■□□□□ 0.68
PRKCB-209ENST00000498058 FAM221BA6H8Z2 402 aa19.28■□□□□ 0.68
PRKCB-209ENST00000498058 BCAT2O15382 392 aaPredicted RBP19.28■□□□□ 0.68
PRKCB-209ENST00000498058 TBL1XO60907 577 aa19.28■□□□□ 0.68
PRKCB-209ENST00000498058 CBFA2T3O75081 653 aa19.28■□□□□ 0.68
PRKCB-209ENST00000498058 LTFP02788 710 aa19.28■□□□□ 0.68
PRKCB-209ENST00000498058 SLC14A1Q13336 389 aa19.28■□□□□ 0.68
PRKCB-209ENST00000498058 TRIP6Q15654 476 aaKnown RBP19.28■□□□□ 0.68
PRKCB-209ENST00000498058 NAXDQ8IW45 347 aa19.28■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms