RNA–Protein interactions for RNA: ENST00000496882.5

SRRM1-220, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 5

Gene SRRM1, Length 834 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-220ENST00000496882 UBE2TQ9NPD8 197 aaPredicted RBP8.18□□□□□ -1.1
SRRM1-220ENST00000496882 AGO1Q9UL18 857 aaKnown RBP8.18□□□□□ -1.1
SRRM1-220ENST00000496882 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.18□□□□□ -1.1
SRRM1-220ENST00000496882 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa8.17□□□□□ -1.1
SRRM1-220ENST00000496882 MED19A0JLT2 244 aaPredicted RBP8.17□□□□□ -1.1
SRRM1-220ENST00000496882 YJEFN3A6XGL0 299 aa8.17□□□□□ -1.1
SRRM1-220ENST00000496882 PRRT4C9JH25 899 aa8.17□□□□□ -1.1
SRRM1-220ENST00000496882 E7ENQ6 273 aa8.17□□□□□ -1.1
SRRM1-220ENST00000496882 CAPN9O14815 690 aa8.17□□□□□ -1.1
SRRM1-220ENST00000496882 TRIM24O15164 1050 aa8.17□□□□□ -1.1
SRRM1-220ENST00000496882 THAP12O43422 761 aa8.17□□□□□ -1.1
SRRM1-220ENST00000496882 TIMM44O43615 452 aa8.17□□□□□ -1.1
SRRM1-220ENST00000496882 DKK1O94907 266 aa8.17□□□□□ -1.1
SRRM1-220ENST00000496882 PENKP01210 267 aaPredicted RBP8.17□□□□□ -1.1
SRRM1-220ENST00000496882 KLKB1P03952 638 aa8.17□□□□□ -1.1
SRRM1-220ENST00000496882 ACADMP11310 421 aa8.17□□□□□ -1.1
SRRM1-220ENST00000496882 HNRNPLP14866 589 aaKnown RBP eCLIP8.17□□□□□ -1.1
SRRM1-220ENST00000496882 GABRG2P18507 467 aa8.17□□□□□ -1.1
SRRM1-220ENST00000496882 BCKDHBP21953 392 aa8.17□□□□□ -1.1
SRRM1-220ENST00000496882 BMP6P22004 513 aa8.17□□□□□ -1.1
SRRM1-220ENST00000496882 USP8P40818 1118 aa8.17□□□□□ -1.1
SRRM1-220ENST00000496882 ATXN3P54252 364 aaPredicted RBP8.17□□□□□ -1.1
SRRM1-220ENST00000496882 LMAN2Q12907 356 aa8.17□□□□□ -1.1
SRRM1-220ENST00000496882 EIF4HQ15056 248 aaKnown RBP8.17□□□□□ -1.1
SRRM1-220ENST00000496882 TRIP4Q15650 581 aaPredicted RBP8.17□□□□□ -1.1
SRRM1-220ENST00000496882 LINC01559Q495D7 138 aa8.17□□□□□ -1.1
SRRM1-220ENST00000496882 PLA2G2CQ5R387 149 aa8.17□□□□□ -1.1
SRRM1-220ENST00000496882 STPG1Q5TH74 334 aa8.17□□□□□ -1.1
SRRM1-220ENST00000496882 FYB2Q5VWT5 728 aa8.17□□□□□ -1.1
SRRM1-220ENST00000496882 NUGGCQ68CJ6 796 aa8.17□□□□□ -1.1
SRRM1-220ENST00000496882 KIAA1324Q6UXG2 1013 aaKnown RBP8.17□□□□□ -1.1
SRRM1-220ENST00000496882 GBP6Q6ZN66 633 aa8.17□□□□□ -1.1
SRRM1-220ENST00000496882 TOGARAM2Q6ZUX3 1019 aa8.17□□□□□ -1.1
SRRM1-220ENST00000496882 ARMCX6Q7L4S7 300 aa8.17□□□□□ -1.1
SRRM1-220ENST00000496882 ARHGEF19Q8IW93 802 aa8.17□□□□□ -1.1
SRRM1-220ENST00000496882 TMEFF1Q8IYR6 380 aa8.17□□□□□ -1.1
SRRM1-220ENST00000496882 ZNF511Q8NB15 262 aa8.17□□□□□ -1.1
SRRM1-220ENST00000496882 MLKLQ8NB16 471 aa8.17□□□□□ -1.1
SRRM1-220ENST00000496882 TPCN2Q8NHX9 752 aa8.17□□□□□ -1.1
SRRM1-220ENST00000496882 OLIG1Q8TAK6 271 aa8.17□□□□□ -1.1
SRRM1-220ENST00000496882 WFIKKN2Q8TEU8 576 aa8.17□□□□□ -1.1
SRRM1-220ENST00000496882 IPO4Q8TEX9 1081 aaKnown RBP8.17□□□□□ -1.1
SRRM1-220ENST00000496882 SLC35F5Q8WV83 523 aa8.17□□□□□ -1.1
SRRM1-220ENST00000496882 NDRG1Q92597 394 aaKnown RBP8.17□□□□□ -1.1
SRRM1-220ENST00000496882 FOXJ1Q92949 421 aa8.17□□□□□ -1.1
SRRM1-220ENST00000496882 KAT5Q92993 513 aa8.17□□□□□ -1.1
SRRM1-220ENST00000496882 TMA16Q96EY4 203 aaKnown RBP8.17□□□□□ -1.1
SRRM1-220ENST00000496882 SERPINB11Q96P15 392 aa8.17□□□□□ -1.1
SRRM1-220ENST00000496882 MIS12Q9H081 205 aa8.17□□□□□ -1.1
SRRM1-220ENST00000496882 SMOC1Q9H4F8 434 aa8.17□□□□□ -1.1
SRRM1-220ENST00000496882 CACNA2D2Q9NY47 1150 aa8.17□□□□□ -1.1
SRRM1-220ENST00000496882 CALCOCO1Q9P1Z2 691 aa8.17□□□□□ -1.1
SRRM1-220ENST00000496882 SFMBT1Q9UHJ3 866 aa8.17□□□□□ -1.1
SRRM1-220ENST00000496882 SLC27A6Q9Y2P4 619 aa8.17□□□□□ -1.1
SRRM1-220ENST00000496882 KIAA1549LQ6ZVL6 1849 aa8.17□□□□□ -1.1
SRRM1-220ENST00000496882 RALGAPA1Q6GYQ0 2036 aa8.17□□□□□ -1.1
SRRM1-220ENST00000496882 GPR179Q6PRD1 2367 aa8.17□□□□□ -1.1
SRRM1-220ENST00000496882 ANTXRLA6NF34 631 aa8.16□□□□□ -1.1
SRRM1-220ENST00000496882 PIK3R2O00459 728 aa8.16□□□□□ -1.1
SRRM1-220ENST00000496882 PES1O00541 588 aaKnown RBP8.16□□□□□ -1.1
SRRM1-220ENST00000496882 TSPAN3O60637 253 aa8.16□□□□□ -1.1
SRRM1-220ENST00000496882 FRYLO94915 3013 aa8.16□□□□□ -1.1
SRRM1-220ENST00000496882 LETM1O95202 739 aaPredicted RBP8.16□□□□□ -1.1
SRRM1-220ENST00000496882 CISD3P0C7P0 127 aa8.16□□□□□ -1.1
SRRM1-220ENST00000496882 NCAM1P13591 858 aa8.16□□□□□ -1.1
SRRM1-220ENST00000496882 GNA15P30679 374 aa8.16□□□□□ -1.1
SRRM1-220ENST00000496882 HOXD12P35452 270 aa8.16□□□□□ -1.1
SRRM1-220ENST00000496882 TBX4P57082 545 aa8.16□□□□□ -1.1
SRRM1-220ENST00000496882 SNX16P57768 344 aa8.16□□□□□ -1.1
SRRM1-220ENST00000496882 ARHGAP44Q17R89 818 aa8.16□□□□□ -1.1
SRRM1-220ENST00000496882 EXOC3L4Q17RC7 722 aa8.16□□□□□ -1.1
SRRM1-220ENST00000496882 PKDCCQ504Y2 493 aa8.16□□□□□ -1.1
SRRM1-220ENST00000496882 SYCP2LQ5T4T6 812 aa8.16□□□□□ -1.1
SRRM1-220ENST00000496882 ADGRF1Q5T601 910 aa8.16□□□□□ -1.1
SRRM1-220ENST00000496882 TCEAL6Q6IPX3 200 aa8.16□□□□□ -1.1
SRRM1-220ENST00000496882 PMF1Q6P1K2 205 aa8.16□□□□□ -1.1
SRRM1-220ENST00000496882 MSANTD2Q6P1R3 559 aa8.16□□□□□ -1.1
SRRM1-220ENST00000496882 SERPINA13PQ6UXR4 307 aa8.16□□□□□ -1.1
SRRM1-220ENST00000496882 DNAJC14Q6Y2X3 702 aaPredicted RBP8.16□□□□□ -1.1
SRRM1-220ENST00000496882 SYT12Q8IV01 421 aa8.16□□□□□ -1.1
SRRM1-220ENST00000496882 RGL4Q8IZJ4 473 aa8.16□□□□□ -1.1
SRRM1-220ENST00000496882 LMO3Q8TAP4 145 aa8.16□□□□□ -1.1
SRRM1-220ENST00000496882 CEP76Q8TAP6 659 aa8.16□□□□□ -1.1
SRRM1-220ENST00000496882 TFAP2BQ92481 460 aa8.16□□□□□ -1.1
SRRM1-220ENST00000496882 TCEAL3Q969E4 200 aa8.16□□□□□ -1.1
SRRM1-220ENST00000496882 KCTD12Q96CX2 325 aaKnown RBP8.16□□□□□ -1.1
SRRM1-220ENST00000496882 NOX5Q96PH1 765 aa8.16□□□□□ -1.1
SRRM1-220ENST00000496882 MED15Q96RN5 788 aa8.16□□□□□ -1.1
SRRM1-220ENST00000496882 ACOX2Q99424 681 aa8.16□□□□□ -1.1
SRRM1-220ENST00000496882 GABRG3Q99928 467 aa8.16□□□□□ -1.1
SRRM1-220ENST00000496882 IRX2Q9BZI1 471 aaPredicted RBP8.16□□□□□ -1.1
SRRM1-220ENST00000496882 TMEM9BQ9NQ34 198 aa8.16□□□□□ -1.1
SRRM1-220ENST00000496882 ELOVL2Q9NXB9 296 aa8.16□□□□□ -1.1
SRRM1-220ENST00000496882 FBXO10Q9UK96 956 aa8.16□□□□□ -1.1
SRRM1-220ENST00000496882 CYP8B1Q9UNU6 501 aa8.16□□□□□ -1.1
SRRM1-220ENST00000496882 PLA2G4CQ9UP65 541 aa8.16□□□□□ -1.1
SRRM1-220ENST00000496882 CEP83Q9Y592 693 aa8.16□□□□□ -1.1
SRRM1-220ENST00000496882 RAD54BQ9Y620 910 aa8.16□□□□□ -1.1
SRRM1-220ENST00000496882 STON1Q9Y6Q2 735 aa8.16□□□□□ -1.1
SRRM1-220ENST00000496882 A0A1W2PQF6 199 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms