RNA–Protein interactions for RNA: ENST00000496071.5

COMMD3-214, Transcript of COMM domain containing 3, humanhuman

TSL 5

Gene COMMD3, Length 1,150 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-214ENST00000496071 HMGB4Q8WW32 186 aa17.7■□□□□ 0.42
COMMD3-214ENST00000496071 DDX1Q92499 740 aaKnown RBP17.7■□□□□ 0.42
COMMD3-214ENST00000496071 BTN2A3PQ96KV6 586 aa17.7■□□□□ 0.42
COMMD3-214ENST00000496071 SPACA7Q96KW9 195 aa17.7■□□□□ 0.42
COMMD3-214ENST00000496071 SPAG5Q96R06 1193 aa17.7■□□□□ 0.42
COMMD3-214ENST00000496071 DUSP15Q9H1R2 295 aaPredicted RBP17.7■□□□□ 0.42
COMMD3-214ENST00000496071 RRN3Q9NYV6 651 aa17.7■□□□□ 0.42
COMMD3-214ENST00000496071 THAP10Q9P2Z0 257 aaPredicted RBP17.7■□□□□ 0.42
COMMD3-214ENST00000496071 CLEC4EQ9ULY5 219 aa17.7■□□□□ 0.42
COMMD3-214ENST00000496071 STON1Q9Y6Q2 735 aa17.7■□□□□ 0.42
COMMD3-214ENST00000496071 GVINP1Q7Z2Y8 2422 aa17.7■□□□□ 0.42
COMMD3-214ENST00000496071 ZNF292O60281 2723 aa17.7■□□□□ 0.42
COMMD3-214ENST00000496071 A0A1W2PQF6 199 aa17.69■□□□□ 0.42
COMMD3-214ENST00000496071 PRR5-ARHGAP8B1AHC4 643 aa17.69■□□□□ 0.42
COMMD3-214ENST00000496071 DCLK1O15075 740 aa17.69■□□□□ 0.42
COMMD3-214ENST00000496071 TBL1XO60907 577 aa17.69■□□□□ 0.42
COMMD3-214ENST00000496071 SDHBP21912 280 aa17.69■□□□□ 0.42
COMMD3-214ENST00000496071 SLC6A4P31645 630 aa17.69■□□□□ 0.42
COMMD3-214ENST00000496071 NOS2P35228 1153 aa17.69■□□□□ 0.42
COMMD3-214ENST00000496071 SOX5P35711 763 aa17.69■□□□□ 0.42
COMMD3-214ENST00000496071 SCNN1AP37088 669 aa17.69■□□□□ 0.42
COMMD3-214ENST00000496071 P2RY2P41231 377 aa17.69■□□□□ 0.42
COMMD3-214ENST00000496071 STAT1P42224 750 aa17.69■□□□□ 0.42
COMMD3-214ENST00000496071 GABRB2P47870 512 aa17.69■□□□□ 0.42
COMMD3-214ENST00000496071 KLK7P49862 253 aa17.69■□□□□ 0.42
COMMD3-214ENST00000496071 ARHGAP8P85298 464 aa17.69■□□□□ 0.42
COMMD3-214ENST00000496071 ENPP2Q13822 863 aa17.69■□□□□ 0.42
COMMD3-214ENST00000496071 STARD3Q14849 445 aa17.69■□□□□ 0.42
COMMD3-214ENST00000496071 ZC3H12AQ5D1E8 599 aaKnown RBP17.69■□□□□ 0.42
COMMD3-214ENST00000496071 RNF43Q68DV7 783 aa17.69■□□□□ 0.42
COMMD3-214ENST00000496071 NADSYN1Q6IA69 706 aa17.69■□□□□ 0.42
COMMD3-214ENST00000496071 RFWD3Q6PCD5 774 aa17.69■□□□□ 0.42
COMMD3-214ENST00000496071 KIAA0907Q7Z7F0 614 aaPredicted RBP17.69■□□□□ 0.42
COMMD3-214ENST00000496071 NOP9Q86U38 636 aaKnown RBP17.69■□□□□ 0.42
COMMD3-214ENST00000496071 ERICH1Q86X53 443 aa17.69■□□□□ 0.42
COMMD3-214ENST00000496071 CCDC117Q8IWD4 279 aaPredicted RBP17.69■□□□□ 0.42
COMMD3-214ENST00000496071 AHI1Q8N157 1196 aa17.69■□□□□ 0.42
COMMD3-214ENST00000496071 DDX51Q8N8A6 666 aaKnown RBP eCLIP17.69■□□□□ 0.42
COMMD3-214ENST00000496071 NEK11Q8NG66 645 aa17.69■□□□□ 0.42
COMMD3-214ENST00000496071 EPS8L1Q8TE68 723 aa17.69■□□□□ 0.42
COMMD3-214ENST00000496071 C18orf8Q96DM3 657 aa17.69■□□□□ 0.42
COMMD3-214ENST00000496071 ERGIC2Q96RQ1 377 aa17.69■□□□□ 0.42
COMMD3-214ENST00000496071 FAM204AQ9H8W3 233 aa17.69■□□□□ 0.42
COMMD3-214ENST00000496071 PARD6AQ9NPB6 346 aa17.69■□□□□ 0.42
COMMD3-214ENST00000496071 NLRC4Q9NPP4 1024 aa17.69■□□□□ 0.42
COMMD3-214ENST00000496071 SEMA4GQ9NTN9 838 aa17.69■□□□□ 0.42
COMMD3-214ENST00000496071 TMEM51Q9NW97 253 aa17.69■□□□□ 0.42
COMMD3-214ENST00000496071 CACNA2D2Q9NY47 1150 aa17.69■□□□□ 0.42
COMMD3-214ENST00000496071 DMDP11532 3685 aa17.69■□□□□ 0.42
COMMD3-214ENST00000496071 GPR179Q6PRD1 2367 aa17.68■□□□□ 0.42
COMMD3-214ENST00000496071 DAB1O75553 588 aa17.68■□□□□ 0.42
COMMD3-214ENST00000496071 GRAP2O75791 330 aa17.68■□□□□ 0.42
COMMD3-214ENST00000496071 GFPT2O94808 682 aa17.68■□□□□ 0.42
COMMD3-214ENST00000496071 MOCS2O96007 188 aaPredicted RBP17.68■□□□□ 0.42
COMMD3-214ENST00000496071 GABRG2P18507 467 aa17.68■□□□□ 0.42
COMMD3-214ENST00000496071 PTMSP20962 102 aa17.68■□□□□ 0.42
COMMD3-214ENST00000496071 ABCB4P21439 1286 aa17.68■□□□□ 0.42
COMMD3-214ENST00000496071 HLA-FP30511 346 aa17.68■□□□□ 0.42
COMMD3-214ENST00000496071 CCR1P32246 355 aa17.68■□□□□ 0.42
COMMD3-214ENST00000496071 ID4P47928 161 aa17.68■□□□□ 0.42
COMMD3-214ENST00000496071 JAM2P57087 298 aa17.68■□□□□ 0.42
COMMD3-214ENST00000496071 MS4A13Q5J8X5 152 aa17.68■□□□□ 0.42
COMMD3-214ENST00000496071 TAF3Q5VWG9 929 aa17.68■□□□□ 0.42
COMMD3-214ENST00000496071 RNF34Q969K3 372 aa17.68■□□□□ 0.42
COMMD3-214ENST00000496071 CIPCQ9C0C6 399 aa17.68■□□□□ 0.42
COMMD3-214ENST00000496071 HSD3B7Q9H2F3 369 aa17.68■□□□□ 0.42
COMMD3-214ENST00000496071 ARRDC1-AS1Q9H2J1 176 aa17.68■□□□□ 0.42
COMMD3-214ENST00000496071 ABCB8Q9NUT2 735 aa17.68■□□□□ 0.42
COMMD3-214ENST00000496071 DDIT4Q9NX09 232 aa17.68■□□□□ 0.42
COMMD3-214ENST00000496071 INVSQ9Y283 1065 aa17.68■□□□□ 0.42
COMMD3-214ENST00000496071 PLXND1Q9Y4D7 1925 aa17.68■□□□□ 0.42
COMMD3-214ENST00000496071 KCNU1A8MYU2 1149 aa17.67■□□□□ 0.42
COMMD3-214ENST00000496071 WASH3PC4AMC7 463 aa17.67■□□□□ 0.42
COMMD3-214ENST00000496071 MAP3K13O43283 966 aa17.67■□□□□ 0.42
COMMD3-214ENST00000496071 ZNF217O75362 1048 aa17.67■□□□□ 0.42
COMMD3-214ENST00000496071 MMEP08473 750 aa17.67■□□□□ 0.42
COMMD3-214ENST00000496071 PABPC1P11940 636 aaKnown RBP17.67■□□□□ 0.42
COMMD3-214ENST00000496071 MATKP42679 507 aa17.67■□□□□ 0.42
COMMD3-214ENST00000496071 SGSHP51688 502 aa17.67■□□□□ 0.42
COMMD3-214ENST00000496071 CDR2Q01850 454 aa17.67■□□□□ 0.42
COMMD3-214ENST00000496071 ZNF234Q14588 700 aa17.67■□□□□ 0.42
COMMD3-214ENST00000496071 KLHL40Q2TBA0 621 aa17.67■□□□□ 0.42
COMMD3-214ENST00000496071 PMS2CLQ68D20 193 aa17.67■□□□□ 0.42
COMMD3-214ENST00000496071 CHST9Q7L1S5 443 aa17.67■□□□□ 0.42
COMMD3-214ENST00000496071 APTXQ7Z2E3 356 aaKnown RBP17.67■□□□□ 0.42
COMMD3-214ENST00000496071 MFN1Q8IWA4 741 aa17.67■□□□□ 0.42
COMMD3-214ENST00000496071 FIBINQ8TAL6 211 aa17.67■□□□□ 0.42
COMMD3-214ENST00000496071 NUCKS1Q9H1E3 243 aaKnown RBP17.67■□□□□ 0.42
COMMD3-214ENST00000496071 CD248Q9HCU0 757 aa17.67■□□□□ 0.42
COMMD3-214ENST00000496071 STIM2Q9P246 746 aa17.67■□□□□ 0.42
COMMD3-214ENST00000496071 GGA2Q9UJY4 613 aa17.67■□□□□ 0.42
COMMD3-214ENST00000496071 NOCTQ9UK39 431 aaKnown RBP17.67■□□□□ 0.42
COMMD3-214ENST00000496071 STAP1Q9ULZ2 295 aa17.67■□□□□ 0.42
COMMD3-214ENST00000496071 PLA2G4CQ9UP65 541 aa17.67■□□□□ 0.42
COMMD3-214ENST00000496071 THADAQ6YHU6 1953 aa17.67■□□□□ 0.42
COMMD3-214ENST00000496071 EPHB6O15197 1021 aa17.66■□□□□ 0.42
COMMD3-214ENST00000496071 SYNCRIPO60506 623 aaKnown RBP17.66■□□□□ 0.42
COMMD3-214ENST00000496071 ATP5BP06576 529 aaKnown RBP17.66■□□□□ 0.42
COMMD3-214ENST00000496071 ZNF806P0C7X5 589 aa17.66■□□□□ 0.42
COMMD3-214ENST00000496071 TACR2P21452 398 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms