RNA–Protein interactions for RNA: ENST00000494458.1

MSH5-217, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 520 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-217ENST00000494458 EIF3HO15372 352 aaKnown RBP eCLIP7.02□□□□□ -1.29
MSH5-217ENST00000494458 CACNG3O60359 315 aa7.02□□□□□ -1.29
MSH5-217ENST00000494458 UPP2O95045 317 aa7.02□□□□□ -1.29
MSH5-217ENST00000494458 SEC24AO95486 1093 aa7.02□□□□□ -1.29
MSH5-217ENST00000494458 ZSCAN5DPP0CG00 497 aa7.02□□□□□ -1.29
MSH5-217ENST00000494458 ACRP10323 421 aa7.02□□□□□ -1.29
MSH5-217ENST00000494458 CTSAP10619 480 aa7.02□□□□□ -1.29
MSH5-217ENST00000494458 SLC2A3P11169 496 aa7.02□□□□□ -1.29
MSH5-217ENST00000494458 ETS1P14921 441 aa7.02□□□□□ -1.29
MSH5-217ENST00000494458 IBSPP21815 317 aaPredicted RBP7.02□□□□□ -1.29
MSH5-217ENST00000494458 AMPD1P23109 780 aa7.02□□□□□ -1.29
MSH5-217ENST00000494458 CCR1P32246 355 aa7.02□□□□□ -1.29
MSH5-217ENST00000494458 OR1D2P34982 312 aa7.02□□□□□ -1.29
MSH5-217ENST00000494458 GGCXP38435 758 aa7.02□□□□□ -1.29
MSH5-217ENST00000494458 ADCY8P40145 1251 aa7.02□□□□□ -1.29
MSH5-217ENST00000494458 ARL4AP40617 200 aa7.02□□□□□ -1.29
MSH5-217ENST00000494458 MAGEA3P43357 314 aa7.02□□□□□ -1.29
MSH5-217ENST00000494458 PPP3CCP48454 512 aa7.02□□□□□ -1.29
MSH5-217ENST00000494458 EIF3BP55884 814 aaKnown RBP7.02□□□□□ -1.29
MSH5-217ENST00000494458 GBE1Q04446 702 aa7.02□□□□□ -1.29
MSH5-217ENST00000494458 TNK2Q07912 1038 aa7.02□□□□□ -1.29
MSH5-217ENST00000494458 DHX9Q08211 1270 aaKnown RBP7.02□□□□□ -1.29
MSH5-217ENST00000494458 CALCOCO2Q13137 446 aa7.02□□□□□ -1.29
MSH5-217ENST00000494458 BTG3Q14201 252 aaPredicted RBP7.02□□□□□ -1.29
MSH5-217ENST00000494458 HLTFQ14527 1009 aaKnown RBP eCLIP7.02□□□□□ -1.29
MSH5-217ENST00000494458 KCNJ11Q14654 390 aa7.02□□□□□ -1.29
MSH5-217ENST00000494458 TRIP4Q15650 581 aaPredicted RBP7.02□□□□□ -1.29
MSH5-217ENST00000494458 ODF2Q5BJF6 829 aa7.02□□□□□ -1.29
MSH5-217ENST00000494458 SLC45A4Q5BKX6 768 aa7.02□□□□□ -1.29
MSH5-217ENST00000494458 EFHC2Q5JST6 749 aa7.02□□□□□ -1.29
MSH5-217ENST00000494458 CFAP58Q5T655 872 aa7.02□□□□□ -1.29
MSH5-217ENST00000494458 BTBD8Q5XKL5 378 aa7.02□□□□□ -1.29
MSH5-217ENST00000494458 ADGRD1Q6QNK2 874 aa7.02□□□□□ -1.29
MSH5-217ENST00000494458 PRSS55Q6UWB4 352 aaPredicted RBP7.02□□□□□ -1.29
MSH5-217ENST00000494458 CEP128Q6ZU80 1094 aa7.02□□□□□ -1.29
MSH5-217ENST00000494458 ZNF365Q70YC5 407 aa7.02□□□□□ -1.29
MSH5-217ENST00000494458 CEP57Q86XR8 500 aa7.02□□□□□ -1.29
MSH5-217ENST00000494458 LRRC49Q8IUZ0 686 aa7.02□□□□□ -1.29
MSH5-217ENST00000494458 LZTR1Q8N653 840 aa7.02□□□□□ -1.29
MSH5-217ENST00000494458 MCUQ8NE86 351 aa7.02□□□□□ -1.29
MSH5-217ENST00000494458 RIN2Q8WYP3 895 aaPredicted RBP7.02□□□□□ -1.29
MSH5-217ENST00000494458 CPT1BQ92523 772 aa7.02□□□□□ -1.29
MSH5-217ENST00000494458 EDEM1Q92611 657 aa7.02□□□□□ -1.29
MSH5-217ENST00000494458 PRCCQ92733 491 aaPredicted RBP7.02□□□□□ -1.29
MSH5-217ENST00000494458 SERPINB11Q96P15 392 aa7.02□□□□□ -1.29
MSH5-217ENST00000494458 ZIM3Q96PE6 472 aa7.02□□□□□ -1.29
MSH5-217ENST00000494458 TSGA13Q96PP4 275 aa7.02□□□□□ -1.29
MSH5-217ENST00000494458 QKIQ96PU8 341 aaKnown RBP eCLIP7.02□□□□□ -1.29
MSH5-217ENST00000494458 CDK5RAP1Q96SZ6 601 aaKnown RBP7.02□□□□□ -1.29
MSH5-217ENST00000494458 RAD9AQ99638 391 aa7.02□□□□□ -1.29
MSH5-217ENST00000494458 PRMT1Q99873 361 aaKnown RBP7.02□□□□□ -1.29
MSH5-217ENST00000494458 FAM118BQ9BPY3 351 aa7.02□□□□□ -1.29
MSH5-217ENST00000494458 TKTL2Q9H0I9 626 aa7.02□□□□□ -1.29
MSH5-217ENST00000494458 ZBP1Q9H171 429 aa7.02□□□□□ -1.29
MSH5-217ENST00000494458 ACBD3Q9H3P7 528 aa7.02□□□□□ -1.29
MSH5-217ENST00000494458 SEMA4AQ9H3S1 761 aa7.02□□□□□ -1.29
MSH5-217ENST00000494458 PRDM5Q9NQX1 630 aaPredicted RBP7.02□□□□□ -1.29
MSH5-217ENST00000494458 TLR8Q9NR97 1041 aaKnown RBP7.02□□□□□ -1.29
MSH5-217ENST00000494458 TMPRSS4Q9NRS4 437 aa7.02□□□□□ -1.29
MSH5-217ENST00000494458 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.02□□□□□ -1.29
MSH5-217ENST00000494458 PAK5Q9P286 719 aa7.02□□□□□ -1.29
MSH5-217ENST00000494458 ZNF212Q9UDV6 495 aa7.02□□□□□ -1.29
MSH5-217ENST00000494458 MTRF1LQ9UGC7 380 aaKnown RBP7.02□□□□□ -1.29
MSH5-217ENST00000494458 ANAPC5Q9UJX4 755 aa7.02□□□□□ -1.29
MSH5-217ENST00000494458 LHX6Q9UPM6 363 aa7.02□□□□□ -1.29
MSH5-217ENST00000494458 SSX2IPQ9Y2D8 614 aa7.02□□□□□ -1.29
MSH5-217ENST00000494458 SLC27A5Q9Y2P5 690 aa7.02□□□□□ -1.29
MSH5-217ENST00000494458 INSL6Q9Y581 213 aa7.02□□□□□ -1.29
MSH5-217ENST00000494458 GOLGA6BA6NDN3 693 aa7.01□□□□□ -1.29
MSH5-217ENST00000494458 ZNF840PA6NDX5 716 aa7.01□□□□□ -1.29
MSH5-217ENST00000494458 GFRA2O00451 464 aa7.01□□□□□ -1.29
MSH5-217ENST00000494458 FGF10O15520 208 aaPredicted RBP7.01□□□□□ -1.29
MSH5-217ENST00000494458 RIPK2O43353 540 aa7.01□□□□□ -1.29
MSH5-217ENST00000494458 PAGE1O75459 146 aa7.01□□□□□ -1.29
MSH5-217ENST00000494458 LRIG2O94898 1065 aa7.01□□□□□ -1.29
MSH5-217ENST00000494458 TTC4O95801 387 aa7.01□□□□□ -1.29
MSH5-217ENST00000494458 ABHD2P08910 425 aa7.01□□□□□ -1.29
MSH5-217ENST00000494458 CSH1P0DML2 217 aa7.01□□□□□ -1.29
MSH5-217ENST00000494458 CSH2P0DML3 217 aa7.01□□□□□ -1.29
MSH5-217ENST00000494458 CPB1P15086 417 aa7.01□□□□□ -1.29
MSH5-217ENST00000494458 TSHRP16473 764 aa7.01□□□□□ -1.29
MSH5-217ENST00000494458 ERCC2P18074 760 aa7.01□□□□□ -1.29
MSH5-217ENST00000494458 RBL1P28749 1068 aa7.01□□□□□ -1.29
MSH5-217ENST00000494458 CHKAP35790 457 aa7.01□□□□□ -1.29
MSH5-217ENST00000494458 KPNA1P52294 538 aaPredicted RBP7.01□□□□□ -1.29
MSH5-217ENST00000494458 PMS2P54278 862 aa7.01□□□□□ -1.29
MSH5-217ENST00000494458 DYNLT1P63172 113 aa7.01□□□□□ -1.29
MSH5-217ENST00000494458 CREMQ03060 361 aa7.01□□□□□ -1.29
MSH5-217ENST00000494458 FPGSQ05932 587 aa7.01□□□□□ -1.29
MSH5-217ENST00000494458 PPIDQ08752 370 aaKnown RBP7.01□□□□□ -1.29
MSH5-217ENST00000494458 GALNT2Q10471 571 aa7.01□□□□□ -1.29
MSH5-217ENST00000494458 WASHC5Q12768 1159 aa7.01□□□□□ -1.29
MSH5-217ENST00000494458 TAF10Q12962 218 aa7.01□□□□□ -1.29
MSH5-217ENST00000494458 GPS1Q13098 491 aa7.01□□□□□ -1.29
MSH5-217ENST00000494458 NME3Q13232 169 aa7.01□□□□□ -1.29
MSH5-217ENST00000494458 PDK1Q15118 436 aa7.01□□□□□ -1.29
MSH5-217ENST00000494458 RASA2Q15283 850 aa7.01□□□□□ -1.29
MSH5-217ENST00000494458 KCTD19Q17RG1 926 aaPredicted RBP7.01□□□□□ -1.29
MSH5-217ENST00000494458 PPP6R3Q5H9R7 873 aaPredicted RBP7.01□□□□□ -1.29
MSH5-217ENST00000494458 ZFYVE27Q5T4F4 411 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms