RNA–Protein interactions for RNA: ENST00000494333.1

RIF1-211, Transcript of replication timing regulatory factor 1, humanhuman

TSL 3

Gene RIF1, Length 743 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-211ENST00000494333 DDX23Q9BUQ8 820 aaKnown RBP8.63□□□□□ -1.03
RIF1-211ENST00000494333 SCAND2PQ9GZW5 306 aaPredicted RBP8.63□□□□□ -1.03
RIF1-211ENST00000494333 TRPV4Q9HBA0 871 aa8.63□□□□□ -1.03
RIF1-211ENST00000494333 ST7Q9NRC1 585 aa8.63□□□□□ -1.03
RIF1-211ENST00000494333 MBNL3Q9NUK0 354 aaKnown RBP8.63□□□□□ -1.03
RIF1-211ENST00000494333 DLGAP2Q9P1A6 1054 aa8.63□□□□□ -1.03
RIF1-211ENST00000494333 CGNQ9P2M7 1197 aaKnown RBP8.63□□□□□ -1.03
RIF1-211ENST00000494333 USP25Q9UHP3 1055 aa8.63□□□□□ -1.03
RIF1-211ENST00000494333 MAGED2Q9UNF1 606 aaPredicted RBP8.63□□□□□ -1.03
RIF1-211ENST00000494333 FHOD1Q9Y613 1164 aa8.63□□□□□ -1.03
RIF1-211ENST00000494333 MYBPHLA2RUH7 354 aa8.62□□□□□ -1.03
RIF1-211ENST00000494333 NCAM2O15394 837 aa8.62□□□□□ -1.03
RIF1-211ENST00000494333 ATP2C2O75185 946 aa8.62□□□□□ -1.03
RIF1-211ENST00000494333 GJB6O95452 261 aa8.62□□□□□ -1.03
RIF1-211ENST00000494333 RPN1P04843 607 aaKnown RBP8.62□□□□□ -1.03
RIF1-211ENST00000494333 MYL1P05976 194 aa8.62□□□□□ -1.03
RIF1-211ENST00000494333 PDGFRBP09619 1106 aa8.62□□□□□ -1.03
RIF1-211ENST00000494333 CSH1P0DML2 217 aa8.62□□□□□ -1.03
RIF1-211ENST00000494333 CSH2P0DML3 217 aa8.62□□□□□ -1.03
RIF1-211ENST00000494333 PCSK1P29120 753 aa8.62□□□□□ -1.03
RIF1-211ENST00000494333 CDC25CP30307 473 aa8.62□□□□□ -1.03
RIF1-211ENST00000494333 NBL1P41271 181 aa8.62□□□□□ -1.03
RIF1-211ENST00000494333 GPR15P49685 360 aa8.62□□□□□ -1.03
RIF1-211ENST00000494333 RPL10AP62906 217 aaKnown RBP8.62□□□□□ -1.03
RIF1-211ENST00000494333 CYP4F8P98187 520 aa8.62□□□□□ -1.03
RIF1-211ENST00000494333 TRPC3Q13507 836 aa8.62□□□□□ -1.03
RIF1-211ENST00000494333 BECN1Q14457 450 aa8.62□□□□□ -1.03
RIF1-211ENST00000494333 DDR2Q16832 855 aa8.62□□□□□ -1.03
RIF1-211ENST00000494333 WDR72Q3MJ13 1102 aa8.62□□□□□ -1.03
RIF1-211ENST00000494333 SPATA2LQ8IUW3 424 aaPredicted RBP8.62□□□□□ -1.03
RIF1-211ENST00000494333 C1orf210Q8IVY1 113 aa8.62□□□□□ -1.03
RIF1-211ENST00000494333 SCN4BQ8IWT1 228 aa8.62□□□□□ -1.03
RIF1-211ENST00000494333 C12orf56Q8IXR9 622 aa8.62□□□□□ -1.03
RIF1-211ENST00000494333 YAF2Q8IY57 180 aa8.62□□□□□ -1.03
RIF1-211ENST00000494333 KIAA0895Q8NCT3 520 aa8.62□□□□□ -1.03
RIF1-211ENST00000494333 STKLD1Q8NE28 680 aa8.62□□□□□ -1.03
RIF1-211ENST00000494333 GOLGA5Q8TBA6 731 aa8.62□□□□□ -1.03
RIF1-211ENST00000494333 SPATA18Q8TC71 538 aa8.62□□□□□ -1.03
RIF1-211ENST00000494333 DNASE1L2Q92874 299 aa8.62□□□□□ -1.03
RIF1-211ENST00000494333 RSPRY1Q96DX4 576 aa8.62□□□□□ -1.03
RIF1-211ENST00000494333 GCNAQ96QF7 691 aa8.62□□□□□ -1.03
RIF1-211ENST00000494333 CGRRF1Q99675 332 aa8.62□□□□□ -1.03
RIF1-211ENST00000494333 SLC46A2Q9BY10 475 aa8.62□□□□□ -1.03
RIF1-211ENST00000494333 OSBPL6Q9BZF3 934 aa8.62□□□□□ -1.03
RIF1-211ENST00000494333 TASP1Q9H6P5 420 aa8.62□□□□□ -1.03
RIF1-211ENST00000494333 LTB4R2Q9NPC1 389 aa8.62□□□□□ -1.03
RIF1-211ENST00000494333 WHRNQ9P202 907 aa8.62□□□□□ -1.03
RIF1-211ENST00000494333 MRPS17Q9Y2R5 130 aaKnown RBP8.62□□□□□ -1.03
RIF1-211ENST00000494333 NOTCH4Q99466 2003 aa8.62□□□□□ -1.03
RIF1-211ENST00000494333 PDCD11Q14690 1871 aaKnown RBP8.62□□□□□ -1.03
RIF1-211ENST00000494333 NCANO14594 1321 aa8.61□□□□□ -1.03
RIF1-211ENST00000494333 FAM237AA0A1B0GTK4 181 aa8.61□□□□□ -1.03
RIF1-211ENST00000494333 A0A1W2PQ27 194 aa8.61□□□□□ -1.03
RIF1-211ENST00000494333 A0A1W2PQ64 194 aa8.61□□□□□ -1.03
RIF1-211ENST00000494333 A0A1W2PQD8 194 aa8.61□□□□□ -1.03
RIF1-211ENST00000494333 SHISA7A6NL88 538 aa8.61□□□□□ -1.03
RIF1-211ENST00000494333 PROB1E7EW31 1015 aa8.61□□□□□ -1.03
RIF1-211ENST00000494333 MAN2B1O00754 1011 aa8.61□□□□□ -1.03
RIF1-211ENST00000494333 PDXKO00764 312 aa8.61□□□□□ -1.03
RIF1-211ENST00000494333 ZNF202O95125 648 aa8.61□□□□□ -1.03
RIF1-211ENST00000494333 RNASE1P07998 156 aaKnown RBP8.61□□□□□ -1.03
RIF1-211ENST00000494333 HMGA1P17096 107 aaKnown RBP8.61□□□□□ -1.03
RIF1-211ENST00000494333 GNL1P36915 607 aaPredicted RBP8.61□□□□□ -1.03
RIF1-211ENST00000494333 CASP4P49662 377 aa8.61□□□□□ -1.03
RIF1-211ENST00000494333 MYL6P60660 151 aa8.61□□□□□ -1.03
RIF1-211ENST00000494333 PSMC1P62191 440 aaKnown RBP8.61□□□□□ -1.03
RIF1-211ENST00000494333 CCDC142Q17RM4 750 aa8.61□□□□□ -1.03
RIF1-211ENST00000494333 MRM1Q6IN84 353 aaKnown RBP8.61□□□□□ -1.03
RIF1-211ENST00000494333 FAM171BQ6P995 826 aa8.61□□□□□ -1.03
RIF1-211ENST00000494333 KRBA2Q6ZNG9 492 aa8.61□□□□□ -1.03
RIF1-211ENST00000494333 LIMS2Q7Z4I7 341 aa8.61□□□□□ -1.03
RIF1-211ENST00000494333 FRMD5Q7Z6J6 570 aa8.61□□□□□ -1.03
RIF1-211ENST00000494333 ADAT2Q7Z6V5 191 aaKnown RBP8.61□□□□□ -1.03
RIF1-211ENST00000494333 TMEM150AQ86TG1 271 aa8.61□□□□□ -1.03
RIF1-211ENST00000494333 CMTM8Q8IZV2 173 aa8.61□□□□□ -1.03
RIF1-211ENST00000494333 MAB21L3Q8N8X9 362 aa8.61□□□□□ -1.03
RIF1-211ENST00000494333 FSIP1Q8NA03 581 aa8.61□□□□□ -1.03
RIF1-211ENST00000494333 ADCY4Q8NFM4 1077 aa8.61□□□□□ -1.03
RIF1-211ENST00000494333 OR6B3Q8NGW1 331 aa8.61□□□□□ -1.03
RIF1-211ENST00000494333 CSGALNACT1Q8TDX6 532 aa8.61□□□□□ -1.03
RIF1-211ENST00000494333 PARD3BQ8TEW8 1205 aa8.61□□□□□ -1.03
RIF1-211ENST00000494333 KBTBD7Q8WVZ9 684 aa8.61□□□□□ -1.03
RIF1-211ENST00000494333 FAM3CQ92520 227 aa8.61□□□□□ -1.03
RIF1-211ENST00000494333 CCDC47Q96A33 483 aaKnown RBP8.61□□□□□ -1.03
RIF1-211ENST00000494333 LRRC3BQ96PB8 259 aa8.61□□□□□ -1.03
RIF1-211ENST00000494333 PKMYT1Q99640 499 aa8.61□□□□□ -1.03
RIF1-211ENST00000494333 SYT15Q9BQS2 421 aa8.61□□□□□ -1.03
RIF1-211ENST00000494333 MRPL45Q9BRJ2 306 aaKnown RBP8.61□□□□□ -1.03
RIF1-211ENST00000494333 FOXP3Q9BZS1 431 aa8.61□□□□□ -1.03
RIF1-211ENST00000494333 SNX25Q9H3E2 840 aa8.61□□□□□ -1.03
RIF1-211ENST00000494333 KCTD10Q9H3F6 313 aa8.61□□□□□ -1.03
RIF1-211ENST00000494333 TRPV5Q9NQA5 729 aa8.61□□□□□ -1.03
RIF1-211ENST00000494333 SPATA6Q9NWH7 488 aaPredicted RBP8.61□□□□□ -1.03
RIF1-211ENST00000494333 MAGEC2Q9UBF1 373 aaPredicted RBP8.61□□□□□ -1.03
RIF1-211ENST00000494333 CDH9Q9ULB4 789 aa8.61□□□□□ -1.03
RIF1-211ENST00000494333 NDRG2Q9UN36 371 aaKnown RBP8.61□□□□□ -1.03
RIF1-211ENST00000494333 PIAS3Q9Y6X2 628 aa8.61□□□□□ -1.03
RIF1-211ENST00000494333 SCN1AP35498 2009 aa8.61□□□□□ -1.03
RIF1-211ENST00000494333 KMT2EQ8IZD2 1858 aa8.6□□□□□ -1.03
RIF1-211ENST00000494333 ANKRD34BA5PLL1 514 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms