RNA–Protein interactions for RNA: ENST00000494123.5

BRCA1-223, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,612 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-223ENST00000494123 ATRIPQ8WXE1 791 aa15.08■□□□□ 0
BRCA1-223ENST00000494123 DNASE1L2Q92874 299 aa15.08■□□□□ 0
BRCA1-223ENST00000494123 HAPLN3Q96S86 360 aa15.08■□□□□ 0
BRCA1-223ENST00000494123 CD320Q9NPF0 282 aa15.08■□□□□ 0
BRCA1-223ENST00000494123 LZTFL1Q9NQ48 299 aa15.08■□□□□ 0
BRCA1-223ENST00000494123 SPHK2Q9NRA0 654 aa15.08■□□□□ 0
BRCA1-223ENST00000494123 TMPRSS4Q9NRS4 437 aa15.08■□□□□ 0
BRCA1-223ENST00000494123 GTSE1Q9NYZ3 720 aa15.08■□□□□ 0
BRCA1-223ENST00000494123 SALL4Q9UJQ4 1053 aa15.08■□□□□ 0
BRCA1-223ENST00000494123 USP18Q9UMW8 372 aa15.08■□□□□ 0
BRCA1-223ENST00000494123 GUCA1BQ9UMX6 200 aa15.08■□□□□ 0
BRCA1-223ENST00000494123 F5H5T6 163 aa15.07■□□□□ 0
BRCA1-223ENST00000494123 TRDMT1O14717 391 aaKnown RBP15.07■□□□□ 0
BRCA1-223ENST00000494123 BUB1BO60566 1050 aaPredicted RBP15.07■□□□□ 0
BRCA1-223ENST00000494123 TSPAN3O60637 253 aa15.07■□□□□ 0
BRCA1-223ENST00000494123 CYP17A1P05093 508 aa15.07■□□□□ 0
BRCA1-223ENST00000494123 TACR2P21452 398 aa15.07■□□□□ 0
BRCA1-223ENST00000494123 SLC1A1P43005 524 aa15.07■□□□□ 0
BRCA1-223ENST00000494123 DHCR24Q15392 516 aa15.07■□□□□ 0
BRCA1-223ENST00000494123 ANO4Q32M45 955 aa15.07■□□□□ 0
BRCA1-223ENST00000494123 FAM133BQ5BKY9 247 aaKnown RBP15.07■□□□□ 0
BRCA1-223ENST00000494123 MS4A13Q5J8X5 152 aa15.07■□□□□ 0
BRCA1-223ENST00000494123 PIK3R6Q5UE93 754 aa15.07■□□□□ 0
BRCA1-223ENST00000494123 RFWD3Q6PCD5 774 aa15.07■□□□□ 0
BRCA1-223ENST00000494123 FAM217AQ8IXS0 508 aa15.07■□□□□ 0
BRCA1-223ENST00000494123 ARFGAP1Q8N6T3 406 aa15.07■□□□□ 0
BRCA1-223ENST00000494123 TPCN2Q8NHX9 752 aa15.07■□□□□ 0
BRCA1-223ENST00000494123 ECT2Q9H8V3 914 aa15.07■□□□□ 0
BRCA1-223ENST00000494123 ZWILCHQ9H900 591 aa15.07■□□□□ 0
BRCA1-223ENST00000494123 HPS4Q9NQG7 708 aa15.07■□□□□ 0
BRCA1-223ENST00000494123 ANLNQ9NQW6 1124 aa15.07■□□□□ 0
BRCA1-223ENST00000494123 SLC2A4RGQ9NR83 387 aa15.07■□□□□ 0
BRCA1-223ENST00000494123 MUTYHQ9UIF7 546 aa15.07■□□□□ 0
BRCA1-223ENST00000494123 HS3ST4Q9Y661 456 aa15.07■□□□□ 0
BRCA1-223ENST00000494123 ARNTLO00327 626 aa15.06■□□□□ 0
BRCA1-223ENST00000494123 SPOPO43791 374 aa15.06■□□□□ 0
BRCA1-223ENST00000494123 ADH5P11766 374 aa15.06■□□□□ 0
BRCA1-223ENST00000494123 SLC6A4P31645 630 aa15.06■□□□□ 0
BRCA1-223ENST00000494123 GJC1P36383 396 aa15.06■□□□□ 0
BRCA1-223ENST00000494123 GGCXP38435 758 aa15.06■□□□□ 0
BRCA1-223ENST00000494123 GAD2Q05329 585 aa15.06■□□□□ 0
BRCA1-223ENST00000494123 SCAPQ12770 1279 aa15.06■□□□□ 0
BRCA1-223ENST00000494123 MPPE1Q53F39 396 aa15.06■□□□□ 0
BRCA1-223ENST00000494123 LY6G5CQ5SRR4 150 aa15.06■□□□□ 0
BRCA1-223ENST00000494123 ERMARDQ5T6L9 678 aa15.06■□□□□ 0
BRCA1-223ENST00000494123 C11orf63Q6NUN7 778 aa15.06■□□□□ 0
BRCA1-223ENST00000494123 LRRC31Q6UY01 552 aa15.06■□□□□ 0
BRCA1-223ENST00000494123 UBALD2Q8IYN6 164 aa15.06■□□□□ 0
BRCA1-223ENST00000494123 LGI2Q8N0V4 545 aa15.06■□□□□ 0
BRCA1-223ENST00000494123 DDI1Q8WTU0 396 aa15.06■□□□□ 0
BRCA1-223ENST00000494123 BHMTQ93088 406 aa15.06■□□□□ 0
BRCA1-223ENST00000494123 TMA16Q96EY4 203 aaKnown RBP15.06■□□□□ 0
BRCA1-223ENST00000494123 BBS2Q9BXC9 721 aa15.06■□□□□ 0
BRCA1-223ENST00000494123 TRPV5Q9NQA5 729 aa15.06■□□□□ 0
BRCA1-223ENST00000494123 FZD10Q9ULW2 581 aa15.06■□□□□ 0
BRCA1-223ENST00000494123 AP4E1Q9UPM8 1137 aa15.06■□□□□ 0
BRCA1-223ENST00000494123 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.06■□□□□ 0
BRCA1-223ENST00000494123 NEDD8-MDP1E9PL57 170 aa15.06■□□□□ 0
BRCA1-223ENST00000494123 I6L893 689 aaPredicted RBP15.06■□□□□ 0
BRCA1-223ENST00000494123 MOCS3O95396 460 aa15.06■□□□□ 0
BRCA1-223ENST00000494123 MLLT6P55198 1093 aaPredicted RBP15.06■□□□□ 0
BRCA1-223ENST00000494123 AUHQ13825 339 aaKnown RBP15.06■□□□□ 0
BRCA1-223ENST00000494123 BOLA3Q53S33 107 aa15.06■□□□□ 0
BRCA1-223ENST00000494123 RABGAP1LQ5R372 815 aa15.06■□□□□ 0
BRCA1-223ENST00000494123 ZFYVE27Q5T4F4 411 aa15.06■□□□□ 0
BRCA1-223ENST00000494123 RHBDF2Q6PJF5 856 aa15.06■□□□□ 0
BRCA1-223ENST00000494123 ZNF662Q6ZS27 426 aa15.06■□□□□ 0
BRCA1-223ENST00000494123 TMEM25Q86YD3 366 aa15.06■□□□□ 0
BRCA1-223ENST00000494123 RNF10Q8N5U6 811 aaKnown RBP15.06■□□□□ 0
BRCA1-223ENST00000494123 HJURPQ8NCD3 748 aaPredicted RBP15.06■□□□□ 0
BRCA1-223ENST00000494123 C1orf74Q96LT6 269 aa15.06■□□□□ 0
BRCA1-223ENST00000494123 RPRD1AQ96P16 312 aaPredicted RBP15.06■□□□□ 0
BRCA1-223ENST00000494123 PEBP4Q96S96 227 aa15.06■□□□□ 0
BRCA1-223ENST00000494123 PRMT1Q99873 361 aaKnown RBP15.06■□□□□ 0
BRCA1-223ENST00000494123 SNRNP25Q9BV90 132 aaKnown RBP15.06■□□□□ 0
BRCA1-223ENST00000494123 IRX2Q9BZI1 471 aaPredicted RBP15.06■□□□□ 0
BRCA1-223ENST00000494123 DHX35Q9H5Z1 703 aaKnown RBP15.06■□□□□ 0
BRCA1-223ENST00000494123 OR12D3Q9UGF7 316 aa15.06■□□□□ 0
BRCA1-223ENST00000494123 FBXL21Q9UKT6 434 aa15.06■□□□□ 0
BRCA1-223ENST00000494123 VANGL2Q9ULK5 521 aa15.06■□□□□ 0
BRCA1-223ENST00000494123 SRGAP2O75044 1071 aa15.05■□□□□ -0
BRCA1-223ENST00000494123 TNNT1P13805 278 aa15.05■□□□□ -0
BRCA1-223ENST00000494123 TCF4P15884 667 aa15.05■□□□□ -0
BRCA1-223ENST00000494123 COMTP21964 271 aa15.05■□□□□ -0
BRCA1-223ENST00000494123 IL1R2P27930 398 aa15.05■□□□□ -0
BRCA1-223ENST00000494123 AMPD2Q01433 879 aa15.05■□□□□ -0
BRCA1-223ENST00000494123 SLC25A11Q02978 314 aaKnown RBP15.05■□□□□ -0
BRCA1-223ENST00000494123 SMTNL2Q2TAL5 461 aa15.05■□□□□ -0
BRCA1-223ENST00000494123 KCNT1Q5JUK3 1230 aa15.05■□□□□ -0
BRCA1-223ENST00000494123 FBXL22Q6P050 247 aa15.05■□□□□ -0
BRCA1-223ENST00000494123 CPNE8Q86YQ8 564 aa15.05■□□□□ -0
BRCA1-223ENST00000494123 PSTKQ8IV42 348 aaKnown RBP15.05■□□□□ -0
BRCA1-223ENST00000494123 SYCE1Q8N0S2 351 aa15.05■□□□□ -0
BRCA1-223ENST00000494123 KIAA1524Q8TCG1 905 aa15.05■□□□□ -0
BRCA1-223ENST00000494123 HSPH1Q92598 858 aa15.05■□□□□ -0
BRCA1-223ENST00000494123 TRIM44Q96DX7 344 aaPredicted RBP15.05■□□□□ -0
BRCA1-223ENST00000494123 OSBPL2Q9H1P3 480 aa15.05■□□□□ -0
BRCA1-223ENST00000494123 GOLPH3Q9H4A6 298 aa15.05■□□□□ -0
BRCA1-223ENST00000494123 HEBP1Q9NRV9 189 aa15.05■□□□□ -0
BRCA1-223ENST00000494123 GPATCH2LQ9NWQ4 482 aa15.05■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms