RNA–Protein interactions for RNA: ENST00000493945.5

ACTB-213, Transcript of actin beta, humanhuman

TSL 5

Gene ACTB, Length 1,236 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-213ENST00000493945 AGO1Q9UL18 857 aaKnown RBP15.44■□□□□ 0.06
ACTB-213ENST00000493945 FZD10Q9ULW2 581 aa15.44■□□□□ 0.06
ACTB-213ENST00000493945 CCL26Q9Y258 94 aa15.44■□□□□ 0.06
ACTB-213ENST00000493945 JRKLQ9Y4A0 524 aa15.44■□□□□ 0.06
ACTB-213ENST00000493945 CAPN6Q9Y6Q1 641 aa15.44■□□□□ 0.06
ACTB-213ENST00000493945 NUMBLQ9Y6R0 609 aa15.44■□□□□ 0.06
ACTB-213ENST00000493945 FGF10O15520 208 aaPredicted RBP15.43■□□□□ 0.06
ACTB-213ENST00000493945 DAPK3O43293 454 aa15.43■□□□□ 0.06
ACTB-213ENST00000493945 KRT1P04264 644 aa15.43■□□□□ 0.06
ACTB-213ENST00000493945 TFE3P19532 575 aaPredicted RBP15.43■□□□□ 0.06
ACTB-213ENST00000493945 FCARP24071 287 aa15.43■□□□□ 0.06
ACTB-213ENST00000493945 CTNNA2P26232 953 aa15.43■□□□□ 0.06
ACTB-213ENST00000493945 L1CAMP32004 1257 aa15.43■□□□□ 0.06
ACTB-213ENST00000493945 CTNNA1P35221 906 aaKnown RBP15.43■□□□□ 0.06
ACTB-213ENST00000493945 DEKP35659 375 aaKnown RBP15.43■□□□□ 0.06
ACTB-213ENST00000493945 VIPR2P41587 438 aa15.43■□□□□ 0.06
ACTB-213ENST00000493945 OXCT1P55809 520 aa15.43■□□□□ 0.06
ACTB-213ENST00000493945 RWDD2BP57060 319 aa15.43■□□□□ 0.06
ACTB-213ENST00000493945 TPI1P60174 286 aa15.43■□□□□ 0.06
ACTB-213ENST00000493945 SLC25A11Q02978 314 aaKnown RBP15.43■□□□□ 0.06
ACTB-213ENST00000493945 RPS6KA1Q15418 735 aa15.43■□□□□ 0.06
ACTB-213ENST00000493945 ZNF569Q5MCW4 686 aa15.43■□□□□ 0.06
ACTB-213ENST00000493945 SH3PXD2AQ5TCZ1 1133 aa15.43■□□□□ 0.06
ACTB-213ENST00000493945 TANGO2Q6ICL3 276 aa15.43■□□□□ 0.06
ACTB-213ENST00000493945 C1orf228Q6PIY5 440 aa15.43■□□□□ 0.06
ACTB-213ENST00000493945 LRRC57Q8N9N7 239 aa15.43■□□□□ 0.06
ACTB-213ENST00000493945 HSPH1Q92598 858 aa15.43■□□□□ 0.06
ACTB-213ENST00000493945 TBC1D31Q96DN5 1066 aa15.43■□□□□ 0.06
ACTB-213ENST00000493945 MSANTD3Q96H12 275 aa15.43■□□□□ 0.06
ACTB-213ENST00000493945 RPRD1AQ96P16 312 aaPredicted RBP15.43■□□□□ 0.06
ACTB-213ENST00000493945 KXD1Q9BQD3 176 aa15.43■□□□□ 0.06
ACTB-213ENST00000493945 SNRNP25Q9BV90 132 aaKnown RBP15.43■□□□□ 0.06
ACTB-213ENST00000493945 SIK2Q9H0K1 926 aa15.43■□□□□ 0.06
ACTB-213ENST00000493945 OR12D3Q9UGF7 316 aa15.43■□□□□ 0.06
ACTB-213ENST00000493945 KIF26AQ9ULI4 1882 aaPredicted RBP15.43■□□□□ 0.06
ACTB-213ENST00000493945 LRRD1A4D1F6 860 aa15.42■□□□□ 0.06
ACTB-213ENST00000493945 EEF2KO00418 725 aaKnown RBP15.42■□□□□ 0.06
ACTB-213ENST00000493945 TNNT1P13805 278 aa15.42■□□□□ 0.06
ACTB-213ENST00000493945 TACR2P21452 398 aa15.42■□□□□ 0.06
ACTB-213ENST00000493945 CDH6P55285 790 aa15.42■□□□□ 0.06
ACTB-213ENST00000493945 GNG11P61952 73 aa15.42■□□□□ 0.06
ACTB-213ENST00000493945 GAD2Q05329 585 aa15.42■□□□□ 0.06
ACTB-213ENST00000493945 DPYSL2Q16555 572 aa15.42■□□□□ 0.06
ACTB-213ENST00000493945 SMTNL2Q2TAL5 461 aa15.42■□□□□ 0.06
ACTB-213ENST00000493945 PPP6R3Q5H9R7 873 aaPredicted RBP15.42■□□□□ 0.06
ACTB-213ENST00000493945 MS4A13Q5J8X5 152 aa15.42■□□□□ 0.06
ACTB-213ENST00000493945 MPP7Q5T2T1 576 aa15.42■□□□□ 0.06
ACTB-213ENST00000493945 SEL1L2Q5TEA6 688 aa15.42■□□□□ 0.06
ACTB-213ENST00000493945 PARM1Q6UWI2 310 aa15.42■□□□□ 0.06
ACTB-213ENST00000493945 VITQ6UXI7 678 aa15.42■□□□□ 0.06
ACTB-213ENST00000493945 NUDT18Q6ZVK8 323 aa15.42■□□□□ 0.06
ACTB-213ENST00000493945 NT5DC3Q86UY8 548 aa15.42■□□□□ 0.06
ACTB-213ENST00000493945 CCDC50Q8IVM0 306 aa15.42■□□□□ 0.06
ACTB-213ENST00000493945 BBS7Q8IWZ6 715 aa15.42■□□□□ 0.06
ACTB-213ENST00000493945 KATNAL2Q8IYT4 538 aa15.42■□□□□ 0.06
ACTB-213ENST00000493945 CCDC185Q8N715 623 aa15.42■□□□□ 0.06
ACTB-213ENST00000493945 TRAF3IP1Q8TDR0 691 aaPredicted RBP15.42■□□□□ 0.06
ACTB-213ENST00000493945 DNASE1L2Q92874 299 aa15.42■□□□□ 0.06
ACTB-213ENST00000493945 FGF14Q92915 247 aa15.42■□□□□ 0.06
ACTB-213ENST00000493945 ASB2Q96Q27 587 aa15.42■□□□□ 0.06
ACTB-213ENST00000493945 XPO6Q96QU8 1125 aaKnown RBP15.42■□□□□ 0.06
ACTB-213ENST00000493945 ZNF670Q9BS34 389 aa15.42■□□□□ 0.06
ACTB-213ENST00000493945 MAK16Q9BXY0 300 aaKnown RBP15.42■□□□□ 0.06
ACTB-213ENST00000493945 SALL4Q9UJQ4 1053 aa15.42■□□□□ 0.06
ACTB-213ENST00000493945 SZT2Q5T011 3432 aa15.42■□□□□ 0.06
ACTB-213ENST00000493945 A0A1B0GVM2 712 aa15.41■□□□□ 0.06
ACTB-213ENST00000493945 TCAF2A6NFQ2 919 aa15.41■□□□□ 0.06
ACTB-213ENST00000493945 PALM2-AKAP2B1ALY0 433 aaPredicted RBP15.41■□□□□ 0.06
ACTB-213ENST00000493945 ZNF487B1APH4 448 aa15.41■□□□□ 0.06
ACTB-213ENST00000493945 LOC730098B7Z3J9 87 aa15.41■□□□□ 0.06
ACTB-213ENST00000493945 NRG2O14511 850 aaPredicted RBP15.41■□□□□ 0.06
ACTB-213ENST00000493945 CREB3O43889 395 aa15.41■□□□□ 0.06
ACTB-213ENST00000493945 ZRANB2O95218 330 aaKnown RBP eCLIP15.41■□□□□ 0.063e-16■■□□□ 14.2
ACTB-213ENST00000493945 FTCDO95954 541 aa15.41■□□□□ 0.06
ACTB-213ENST00000493945 RARAP10276 462 aa15.41■□□□□ 0.06
ACTB-213ENST00000493945 ZFXP17010 805 aaPredicted RBP15.41■□□□□ 0.06
ACTB-213ENST00000493945 GDI1P31150 447 aa15.41■□□□□ 0.06
ACTB-213ENST00000493945 SERPINB6P35237 376 aa15.41■□□□□ 0.06
ACTB-213ENST00000493945 ATXN1P54253 815 aaKnown RBP15.41■□□□□ 0.06
ACTB-213ENST00000493945 MLLT6P55198 1093 aaPredicted RBP15.41■□□□□ 0.06
ACTB-213ENST00000493945 COPS2P61201 443 aa15.41■□□□□ 0.06
ACTB-213ENST00000493945 ZP2Q05996 745 aa15.41■□□□□ 0.06
ACTB-213ENST00000493945 TDGQ13569 410 aa15.41■□□□□ 0.06
ACTB-213ENST00000493945 E2F5Q15329 346 aa15.41■□□□□ 0.06
ACTB-213ENST00000493945 RAP1GAP2Q684P5 730 aa15.41■□□□□ 0.06
ACTB-213ENST00000493945 RWDD4Q6NW29 188 aaKnown RBP15.41■□□□□ 0.06
ACTB-213ENST00000493945 FAM217AQ8IXS0 508 aa15.41■□□□□ 0.06
ACTB-213ENST00000493945 RCOR2Q8IZ40 523 aa15.41■□□□□ 0.06
ACTB-213ENST00000493945 LGI2Q8N0V4 545 aa15.41■□□□□ 0.06
ACTB-213ENST00000493945 EXD1Q8NHP7 514 aa15.41■□□□□ 0.06
ACTB-213ENST00000493945 DDI1Q8WTU0 396 aa15.41■□□□□ 0.06
ACTB-213ENST00000493945 TMA16Q96EY4 203 aaKnown RBP15.41■□□□□ 0.06
ACTB-213ENST00000493945 CALN1Q9BXU9 219 aa15.41■□□□□ 0.06
ACTB-213ENST00000493945 ZYG11BQ9C0D3 744 aa15.41■□□□□ 0.06
ACTB-213ENST00000493945 KCNK12Q9HB15 430 aa15.41■□□□□ 0.06
ACTB-213ENST00000493945 PRDM6Q9NQX0 595 aa15.41■□□□□ 0.06
ACTB-213ENST00000493945 SPHK2Q9NRA0 654 aa15.41■□□□□ 0.06
ACTB-213ENST00000493945 PPARGC1AQ9UBK2 798 aaKnown RBP15.41■□□□□ 0.06
ACTB-213ENST00000493945 LIMD1Q9UGP4 676 aa15.41■□□□□ 0.06
ACTB-213ENST00000493945 HS3ST4Q9Y661 456 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms