RNA–Protein interactions for RNA: ENST00000493674.5

VPS52-220, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 878 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-220ENST00000493674 CLUHO75153 1309 aa13.1□□□□□ -0.31
VPS52-220ENST00000493674 SLC12A8A0AV02 714 aa13.09□□□□□ -0.31
VPS52-220ENST00000493674 TARSL2A2RTX5 802 aaKnown RBP13.09□□□□□ -0.31
VPS52-220ENST00000493674 PER2O15055 1255 aa13.09□□□□□ -0.31
VPS52-220ENST00000493674 DCLK1O15075 740 aa13.09□□□□□ -0.31
VPS52-220ENST00000493674 RAD51CO43502 376 aa13.09□□□□□ -0.31
VPS52-220ENST00000493674 LIASO43766 372 aa13.09□□□□□ -0.31
VPS52-220ENST00000493674 FGF19O95750 216 aa13.09□□□□□ -0.31
VPS52-220ENST00000493674 APOEP02649 317 aa13.09□□□□□ -0.31
VPS52-220ENST00000493674 PECAM1P16284 738 aaPredicted RBP13.09□□□□□ -0.31
VPS52-220ENST00000493674 COILP38432 576 aaPredicted RBP13.09□□□□□ -0.31
VPS52-220ENST00000493674 ARL4AP40617 200 aa13.09□□□□□ -0.31
VPS52-220ENST00000493674 CCR2P41597 374 aa13.09□□□□□ -0.31
VPS52-220ENST00000493674 PTGIRP43119 386 aa13.09□□□□□ -0.31
VPS52-220ENST00000493674 SLC7A9P82251 487 aa13.09□□□□□ -0.31
VPS52-220ENST00000493674 DHX34Q14147 1143 aaKnown RBP13.09□□□□□ -0.31
VPS52-220ENST00000493674 NAA30Q147X3 362 aaPredicted RBP13.09□□□□□ -0.31
VPS52-220ENST00000493674 GRIN2CQ14957 1233 aa13.09□□□□□ -0.31
VPS52-220ENST00000493674 NOMO1Q15155 1222 aa13.09□□□□□ -0.31
VPS52-220ENST00000493674 OASLQ15646 514 aaKnown RBP13.09□□□□□ -0.31
VPS52-220ENST00000493674 PRSS36Q5K4E3 855 aa13.09□□□□□ -0.31
VPS52-220ENST00000493674 ACBD5Q5T8D3 534 aaPredicted RBP13.09□□□□□ -0.31
VPS52-220ENST00000493674 KAZNQ674X7 775 aa13.09□□□□□ -0.31
VPS52-220ENST00000493674 NUGGCQ68CJ6 796 aa13.09□□□□□ -0.31
VPS52-220ENST00000493674 TMEM184AQ6ZMB5 413 aa13.09□□□□□ -0.31
VPS52-220ENST00000493674 RFX8Q6ZV50 586 aa13.09□□□□□ -0.31
VPS52-220ENST00000493674 RFX6Q8HWS3 928 aa13.09□□□□□ -0.31
VPS52-220ENST00000493674 TTC13Q8NBP0 860 aa13.09□□□□□ -0.31
VPS52-220ENST00000493674 C1orf54Q8WWF1 131 aa13.09□□□□□ -0.31
VPS52-220ENST00000493674 ATG4AQ8WYN0 398 aa13.09□□□□□ -0.31
VPS52-220ENST00000493674 UBXN4Q92575 508 aa13.09□□□□□ -0.31
VPS52-220ENST00000493674 RUBCNQ92622 972 aa13.09□□□□□ -0.31
VPS52-220ENST00000493674 BTN2A3PQ96KV6 586 aa13.09□□□□□ -0.31
VPS52-220ENST00000493674 RUNDC3BQ96NL0 473 aa13.09□□□□□ -0.31
VPS52-220ENST00000493674 CDX2Q99626 313 aaPredicted RBP13.09□□□□□ -0.31
VPS52-220ENST00000493674 PRMT1Q99873 361 aaKnown RBP13.09□□□□□ -0.31
VPS52-220ENST00000493674 KLF16Q9BXK1 252 aaPredicted RBP13.09□□□□□ -0.31
VPS52-220ENST00000493674 PRKD2Q9BZL6 878 aa13.09□□□□□ -0.31
VPS52-220ENST00000493674 TLE6Q9H808 572 aa13.09□□□□□ -0.31
VPS52-220ENST00000493674 ASAH2Q9NR71 780 aa13.09□□□□□ -0.31
VPS52-220ENST00000493674 HCFC1R1Q9NWW0 138 aa13.09□□□□□ -0.31
VPS52-220ENST00000493674 DNMT3BQ9UBC3 853 aaKnown RBP13.09□□□□□ -0.31
VPS52-220ENST00000493674 OR12D3Q9UGF7 316 aa13.09□□□□□ -0.31
VPS52-220ENST00000493674 XPO7Q9UIA9 1087 aaKnown RBP13.09□□□□□ -0.31
VPS52-220ENST00000493674 HS3ST4Q9Y661 456 aa13.09□□□□□ -0.31
VPS52-220ENST00000493674 COL4A3Q01955 1670 aa13.08□□□□□ -0.31
VPS52-220ENST00000493674 IGLV3-10A0A075B6K4 115 aa13.08□□□□□ -0.32
VPS52-220ENST00000493674 UQCRHLA0A096LP55 91 aa13.08□□□□□ -0.32
VPS52-220ENST00000493674 EEF2KO00418 725 aaKnown RBP13.08□□□□□ -0.32
VPS52-220ENST00000493674 APOL1O14791 398 aa13.08□□□□□ -0.32
VPS52-220ENST00000493674 XYLBO75191 536 aa13.08□□□□□ -0.32
VPS52-220ENST00000493674 STC2O76061 302 aa13.08□□□□□ -0.32
VPS52-220ENST00000493674 LRIG2O94898 1065 aa13.08□□□□□ -0.32
VPS52-220ENST00000493674 UQCRHP07919 91 aa13.08□□□□□ -0.32
VPS52-220ENST00000493674 FOSL2P15408 326 aa13.08□□□□□ -0.32
VPS52-220ENST00000493674 ZFXP17010 805 aaPredicted RBP13.08□□□□□ -0.32
VPS52-220ENST00000493674 PTPN2P17706 415 aa13.08□□□□□ -0.32
VPS52-220ENST00000493674 POU3F3P20264 500 aaPredicted RBP13.08□□□□□ -0.32
VPS52-220ENST00000493674 NRIP1P48552 1158 aa13.08□□□□□ -0.32
VPS52-220ENST00000493674 VCPP55072 806 aaKnown RBP13.08□□□□□ -0.32
VPS52-220ENST00000493674 MLLT6P55198 1093 aaPredicted RBP13.08□□□□□ -0.32
VPS52-220ENST00000493674 COG7P83436 770 aa13.08□□□□□ -0.32
VPS52-220ENST00000493674 OTUD4Q01804 1114 aaKnown RBP13.08□□□□□ -0.32
VPS52-220ENST00000493674 PAFAH1B3Q15102 231 aaKnown RBP13.08□□□□□ -0.32
VPS52-220ENST00000493674 C5orf22Q49AR2 442 aa13.08□□□□□ -0.32
VPS52-220ENST00000493674 NCBP2-AS2Q69YL0 99 aa13.08□□□□□ -0.32
VPS52-220ENST00000493674 C8orf74Q6P047 294 aa13.08□□□□□ -0.32
VPS52-220ENST00000493674 ELMSAN1Q6PJG2 1045 aa13.08□□□□□ -0.32
VPS52-220ENST00000493674 MIB1Q86YT6 1006 aa13.08□□□□□ -0.32
VPS52-220ENST00000493674 KLHL7Q8IXQ5 586 aa13.08□□□□□ -0.32
VPS52-220ENST00000493674 GPR161Q8N6U8 529 aaKnown RBP13.08□□□□□ -0.32
VPS52-220ENST00000493674 ATP6V0D2Q8N8Y2 350 aa13.08□□□□□ -0.32
VPS52-220ENST00000493674 SHKBP1Q8TBC3 707 aa13.08□□□□□ -0.32
VPS52-220ENST00000493674 ACTL9Q8TC94 416 aa13.08□□□□□ -0.32
VPS52-220ENST00000493674 ADAMTS19Q8TE59 1207 aa13.08□□□□□ -0.32
VPS52-220ENST00000493674 SEC14L1Q92503 715 aa13.08□□□□□ -0.32
VPS52-220ENST00000493674 MRPS31Q92665 395 aaKnown RBP13.08□□□□□ -0.32
VPS52-220ENST00000493674 RNF34Q969K3 372 aa13.08□□□□□ -0.32
VPS52-220ENST00000493674 MAGOHBQ96A72 148 aaKnown RBP13.08□□□□□ -0.32
VPS52-220ENST00000493674 FAM161BQ96MY7 647 aa13.08□□□□□ -0.32
VPS52-220ENST00000493674 OLFM3Q96PB7 478 aa13.08□□□□□ -0.32
VPS52-220ENST00000493674 SLC22A12Q96S37 553 aa13.08□□□□□ -0.32
VPS52-220ENST00000493674 EPAS1Q99814 870 aa13.08□□□□□ -0.32
VPS52-220ENST00000493674 CORO1BQ9BR76 489 aa13.08□□□□□ -0.32
VPS52-220ENST00000493674 LRRC1Q9BTT6 524 aa13.08□□□□□ -0.32
VPS52-220ENST00000493674 ETNK2Q9NVF9 386 aa13.08□□□□□ -0.32
VPS52-220ENST00000493674 DZANK1Q9NVP4 752 aa13.08□□□□□ -0.32
VPS52-220ENST00000493674 LMCD1Q9NZU5 365 aa13.08□□□□□ -0.32
VPS52-220ENST00000493674 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.08□□□□□ -0.32
VPS52-220ENST00000493674 STOML2Q9UJZ1 356 aa13.08□□□□□ -0.32
VPS52-220ENST00000493674 DRG1Q9Y295 367 aaKnown RBP13.08□□□□□ -0.32
VPS52-220ENST00000493674 NEU2Q9Y3R4 380 aa13.08□□□□□ -0.32
VPS52-220ENST00000493674 SNX10Q9Y5X0 201 aa13.08□□□□□ -0.32
VPS52-220ENST00000493674 V9GYY5 206 aaPredicted RBP13.08□□□□□ -0.32
VPS52-220ENST00000493674 RFXAPO00287 272 aa13.07□□□□□ -0.32
VPS52-220ENST00000493674 GREM1O60565 184 aa13.07□□□□□ -0.32
VPS52-220ENST00000493674 LATS1O95835 1130 aa13.07□□□□□ -0.32
VPS52-220ENST00000493674 GLP2RO95838 553 aa13.07□□□□□ -0.32
VPS52-220ENST00000493674 RHOP08100 348 aa13.07□□□□□ -0.32
VPS52-220ENST00000493674 AMPD1P23109 780 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms