RNA–Protein interactions for RNA: ENST00000493456.5

NUP50-218, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-218ENST00000493456 EXOC1Q9NV70 894 aa18.46■□□□□ 0.55
NUP50-218ENST00000493456 FAM13BQ9NYF5 915 aa18.46■□□□□ 0.55
NUP50-218ENST00000493456 KNL1Q8NG31 2342 aa18.46■□□□□ 0.55
NUP50-218ENST00000493456 A0A1B0GTQ1 180 aa18.45■□□□□ 0.54
NUP50-218ENST00000493456 PLK4O00444 970 aa18.45■□□□□ 0.54
NUP50-218ENST00000493456 VAMP7P51809 220 aa18.45■□□□□ 0.54
NUP50-218ENST00000493456 C21orf59P57076 290 aa18.45■□□□□ 0.54
NUP50-218ENST00000493456 SLC8A3P57103 927 aa18.45■□□□□ 0.54
NUP50-218ENST00000493456 RPS14P62263 151 aaKnown RBP18.45■□□□□ 0.54
NUP50-218ENST00000493456 RACK1P63244 317 aaKnown RBP18.45■□□□□ 0.54
NUP50-218ENST00000493456 CHST9Q7L1S5 443 aa18.45■□□□□ 0.54
NUP50-218ENST00000493456 CEP57L1Q8IYX8 460 aa18.45■□□□□ 0.54
NUP50-218ENST00000493456 TTC39CQ8N584 583 aa18.45■□□□□ 0.54
NUP50-218ENST00000493456 PIP4K2CQ8TBX8 421 aa18.45■□□□□ 0.54
NUP50-218ENST00000493456 CYB5D2Q8WUJ1 264 aa18.45■□□□□ 0.54
NUP50-218ENST00000493456 SKA1Q96BD8 255 aa18.45■□□□□ 0.54
NUP50-218ENST00000493456 ARID3AQ99856 593 aa18.45■□□□□ 0.54
NUP50-218ENST00000493456 PRSS16Q9NQE7 514 aa18.45■□□□□ 0.54
NUP50-218ENST00000493456 SCML1Q9UN30 329 aa18.45■□□□□ 0.54
NUP50-218ENST00000493456 NUMA1Q14980 2115 aa18.44■□□□□ 0.54
NUP50-218ENST00000493456 ATMQ13315 3056 aa18.44■□□□□ 0.54
NUP50-218ENST00000493456 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.44■□□□□ 0.54
NUP50-218ENST00000493456 KCNK3O14649 394 aa18.44■□□□□ 0.54
NUP50-218ENST00000493456 VILLO15195 856 aa18.44■□□□□ 0.54
NUP50-218ENST00000493456 KLRC4O43908 158 aa18.44■□□□□ 0.54
NUP50-218ENST00000493456 LATS1O95835 1130 aa18.44■□□□□ 0.54
NUP50-218ENST00000493456 ATP5BP06576 529 aaKnown RBP18.44■□□□□ 0.54
NUP50-218ENST00000493456 DLDP09622 509 aaKnown RBP18.44■□□□□ 0.54
NUP50-218ENST00000493456 C1SP09871 688 aa18.44■□□□□ 0.54
NUP50-218ENST00000493456 IL9RQ01113 521 aa18.44■□□□□ 0.54
NUP50-218ENST00000493456 ENPEPQ07075 957 aa18.44■□□□□ 0.54
NUP50-218ENST00000493456 KCNT1Q5JUK3 1230 aa18.44■□□□□ 0.54
NUP50-218ENST00000493456 ZNF776Q68DI1 518 aaPredicted RBP18.44■□□□□ 0.54
NUP50-218ENST00000493456 LRRC69Q6ZNQ3 347 aa18.44■□□□□ 0.54
NUP50-218ENST00000493456 USP30Q70CQ3 517 aa18.44■□□□□ 0.54
NUP50-218ENST00000493456 INTS8Q75QN2 995 aaKnown RBP18.44■□□□□ 0.54
NUP50-218ENST00000493456 KIAA0907Q7Z7F0 614 aaPredicted RBP18.44■□□□□ 0.54
NUP50-218ENST00000493456 ZNF366Q8N895 744 aa18.44■□□□□ 0.54
NUP50-218ENST00000493456 LSM14AQ8ND56 463 aaKnown RBP18.44■□□□□ 0.54
NUP50-218ENST00000493456 TAS1R2Q8TE23 839 aa18.44■□□□□ 0.54
NUP50-218ENST00000493456 SLC39A7Q92504 469 aa18.44■□□□□ 0.54
NUP50-218ENST00000493456 FAXDC2Q96IV6 333 aa18.44■□□□□ 0.54
NUP50-218ENST00000493456 HEXIM2Q96MH2 286 aaKnown RBP18.44■□□□□ 0.54
NUP50-218ENST00000493456 ORAI3Q9BRQ5 295 aa18.44■□□□□ 0.54
NUP50-218ENST00000493456 ABCB8Q9NUT2 735 aa18.44■□□□□ 0.54
NUP50-218ENST00000493456 SUN2Q9UH99 717 aa18.44■□□□□ 0.54
NUP50-218ENST00000493456 GGA2Q9UJY4 613 aa18.44■□□□□ 0.54
NUP50-218ENST00000493456 STOML2Q9UJZ1 356 aa18.44■□□□□ 0.54
NUP50-218ENST00000493456 NCKAP1Q9Y2A7 1128 aa18.44■□□□□ 0.54
NUP50-218ENST00000493456 HBS1LQ9Y450 684 aaKnown RBP18.44■□□□□ 0.54
NUP50-218ENST00000493456 ENC1O14682 589 aa18.43■□□□□ 0.54
NUP50-218ENST00000493456 ATXN7O15265 892 aaPredicted RBP18.43■□□□□ 0.54
NUP50-218ENST00000493456 YKT6O15498 198 aa18.43■□□□□ 0.54
NUP50-218ENST00000493456 CALUO43852 315 aaPredicted RBP18.43■□□□□ 0.54
NUP50-218ENST00000493456 RFPL3O75679 317 aa18.43■□□□□ 0.54
NUP50-218ENST00000493456 ZBED1O96006 694 aa18.43■□□□□ 0.54
NUP50-218ENST00000493456 IGHV4-34P06331 123 aa18.43■□□□□ 0.54
NUP50-218ENST00000493456 PABPC1P11940 636 aaKnown RBP18.43■□□□□ 0.54
NUP50-218ENST00000493456 EIF2S3P41091 472 aaKnown RBP18.43■□□□□ 0.54
NUP50-218ENST00000493456 SFSWAPQ12872 951 aaKnown RBP18.43■□□□□ 0.54
NUP50-218ENST00000493456 ZNF394Q53GI3 561 aa18.43■□□□□ 0.54
NUP50-218ENST00000493456 KIAA0895LQ68EN5 471 aa18.43■□□□□ 0.54
NUP50-218ENST00000493456 PM20D1Q6GTS8 502 aa18.43■□□□□ 0.54
NUP50-218ENST00000493456 ADIPOR2Q86V24 386 aa18.43■□□□□ 0.54
NUP50-218ENST00000493456 PIGZQ86VD9 579 aa18.43■□□□□ 0.54
NUP50-218ENST00000493456 FMNL3Q8IVF7 1028 aa18.43■□□□□ 0.54
NUP50-218ENST00000493456 ELF4Q99607 663 aaPredicted RBP18.43■□□□□ 0.54
NUP50-218ENST00000493456 ASXL3Q9C0F0 2248 aa18.43■□□□□ 0.54
NUP50-218ENST00000493456 TENM4Q6N022 2769 aa18.42■□□□□ 0.54
NUP50-218ENST00000493456 A0A1W2PPC4 97 aa18.42■□□□□ 0.54
NUP50-218ENST00000493456 RRP8O43159 456 aaKnown RBP18.42■□□□□ 0.54
NUP50-218ENST00000493456 SLFN14P0C7P3 912 aa18.42■□□□□ 0.54
NUP50-218ENST00000493456 JUPP14923 745 aa18.42■□□□□ 0.54
NUP50-218ENST00000493456 GCLMP48507 274 aa18.42■□□□□ 0.54
NUP50-218ENST00000493456 TKTL1P51854 596 aa18.42■□□□□ 0.54
NUP50-218ENST00000493456 ADGRF1Q5T601 910 aa18.42■□□□□ 0.54
NUP50-218ENST00000493456 RESP18Q5W5W9 173 aa18.42■□□□□ 0.54
NUP50-218ENST00000493456 MBLAC2Q68D91 279 aa18.42■□□□□ 0.54
NUP50-218ENST00000493456 ARHGAP17Q68EM7 881 aa18.42■□□□□ 0.54
NUP50-218ENST00000493456 GRAMD1CQ8IYS0 662 aa18.42■□□□□ 0.54
NUP50-218ENST00000493456 ZNF557Q8N988 423 aaPredicted RBP18.42■□□□□ 0.54
NUP50-218ENST00000493456 TMA16Q96EY4 203 aaKnown RBP18.42■□□□□ 0.54
NUP50-218ENST00000493456 CNDP2Q96KP4 475 aaKnown RBP18.42■□□□□ 0.54
NUP50-218ENST00000493456 IRX2Q9BZI1 471 aaPredicted RBP18.42■□□□□ 0.54
NUP50-218ENST00000493456 PRORYQ9H606 182 aa18.42■□□□□ 0.54
NUP50-218ENST00000493456 TRAF3IP3Q9Y228 551 aa18.42■□□□□ 0.54
NUP50-218ENST00000493456 ZIC2O95409 532 aaPredicted RBP18.41■□□□□ 0.54
NUP50-218ENST00000493456 LDOC1O95751 146 aaPredicted RBP18.41■□□□□ 0.54
NUP50-218ENST00000493456 PRB1P04280 392 aa18.41■□□□□ 0.54
NUP50-218ENST00000493456 TRIM49P0CI25 452 aa18.41■□□□□ 0.54
NUP50-218ENST00000493456 TRIM49CP0CI26 452 aa18.41■□□□□ 0.54
NUP50-218ENST00000493456 KRT13P13646 458 aa18.41■□□□□ 0.54
NUP50-218ENST00000493456 PDIA4P13667 645 aaKnown RBP18.41■□□□□ 0.54
NUP50-218ENST00000493456 POLR2EP19388 210 aaKnown RBP18.41■□□□□ 0.54
NUP50-218ENST00000493456 ABCB4P21439 1286 aa18.41■□□□□ 0.54
NUP50-218ENST00000493456 NFIL3Q16649 462 aa18.41■□□□□ 0.54
NUP50-218ENST00000493456 KMT5BQ4FZB7 885 aa18.41■□□□□ 0.54
NUP50-218ENST00000493456 MPP7Q5T2T1 576 aa18.41■□□□□ 0.54
NUP50-218ENST00000493456 ANKRD52Q8NB46 1076 aa18.41■□□□□ 0.54
NUP50-218ENST00000493456 SLC4A11Q8NBS3 891 aa18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms