RNA–Protein interactions for RNA: ENST00000493387.5

LSM2-214, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 5

Gene LSM2, Length 767 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-214ENST00000493387 BBS7Q8IWZ6 715 aa11.96□□□□□ -0.49
LSM2-214ENST00000493387 CCDC185Q8N715 623 aa11.96□□□□□ -0.49
LSM2-214ENST00000493387 UBL4BQ8N7F7 174 aa11.96□□□□□ -0.49
LSM2-214ENST00000493387 ATP2A3Q93084 1043 aa11.96□□□□□ -0.49
LSM2-214ENST00000493387 WBP2Q969T9 261 aa11.96□□□□□ -0.49
LSM2-214ENST00000493387 RSPRY1Q96DX4 576 aa11.96□□□□□ -0.49
LSM2-214ENST00000493387 LRRC3BQ96PB8 259 aa11.96□□□□□ -0.49
LSM2-214ENST00000493387 RETREG1Q9H6L5 497 aa11.96□□□□□ -0.49
LSM2-214ENST00000493387 ZWILCHQ9H900 591 aa11.96□□□□□ -0.49
LSM2-214ENST00000493387 KCNK12Q9HB15 430 aa11.96□□□□□ -0.49
LSM2-214ENST00000493387 DONSONQ9NYP3 566 aa11.96□□□□□ -0.49
LSM2-214ENST00000493387 AP4E1Q9UPM8 1137 aa11.96□□□□□ -0.49
LSM2-214ENST00000493387 CAPN6Q9Y6Q1 641 aa11.96□□□□□ -0.49
LSM2-214ENST00000493387 C19orf67A6NJJ6 358 aa11.95□□□□□ -0.5
LSM2-214ENST00000493387 ADH1CP00326 375 aa11.95□□□□□ -0.5
LSM2-214ENST00000493387 RARAP10276 462 aa11.95□□□□□ -0.5
LSM2-214ENST00000493387 TACR2P21452 398 aa11.95□□□□□ -0.5
LSM2-214ENST00000493387 CTNNA2P26232 953 aa11.95□□□□□ -0.5
LSM2-214ENST00000493387 IL1R2P27930 398 aa11.95□□□□□ -0.5
LSM2-214ENST00000493387 GDI1P31150 447 aa11.95□□□□□ -0.5
LSM2-214ENST00000493387 TAS2R40P59535 323 aa11.95□□□□□ -0.5
LSM2-214ENST00000493387 AUHQ13825 339 aaKnown RBP11.95□□□□□ -0.5
LSM2-214ENST00000493387 MPPE1Q53F39 396 aa11.95□□□□□ -0.5
LSM2-214ENST00000493387 RAB6CQ53S08 254 aa11.95□□□□□ -0.5
LSM2-214ENST00000493387 MS4A13Q5J8X5 152 aa11.95□□□□□ -0.5
LSM2-214ENST00000493387 RABGAP1LQ5R372 815 aa11.95□□□□□ -0.5
LSM2-214ENST00000493387 MPP7Q5T2T1 576 aa11.95□□□□□ -0.5
LSM2-214ENST00000493387 ZFYVE27Q5T4F4 411 aa11.95□□□□□ -0.5
LSM2-214ENST00000493387 PIK3R6Q5UE93 754 aa11.95□□□□□ -0.5
LSM2-214ENST00000493387 TTC39BQ5VTQ0 682 aaPredicted RBP11.95□□□□□ -0.5
LSM2-214ENST00000493387 NT5DC3Q86UY8 548 aa11.95□□□□□ -0.5
LSM2-214ENST00000493387 VSIG1Q86XK7 387 aa11.95□□□□□ -0.5
LSM2-214ENST00000493387 ADGRG2Q8IZP9 1017 aa11.95□□□□□ -0.5
LSM2-214ENST00000493387 SLC44A3Q8N4M1 653 aa11.95□□□□□ -0.5
LSM2-214ENST00000493387 CPA6Q8N4T0 437 aa11.95□□□□□ -0.5
LSM2-214ENST00000493387 ZNF557Q8N988 423 aaPredicted RBP11.95□□□□□ -0.5
LSM2-214ENST00000493387 RIN3Q8TB24 985 aa11.95□□□□□ -0.5
LSM2-214ENST00000493387 IRF7Q92985 503 aa11.95□□□□□ -0.5
LSM2-214ENST00000493387 CD101Q93033 1021 aa11.95□□□□□ -0.5
LSM2-214ENST00000493387 TMA16Q96EY4 203 aaKnown RBP11.95□□□□□ -0.5
LSM2-214ENST00000493387 PEBP4Q96S96 227 aa11.95□□□□□ -0.5
LSM2-214ENST00000493387 EPAS1Q99814 870 aa11.95□□□□□ -0.5
LSM2-214ENST00000493387 PRMT1Q99873 361 aaKnown RBP11.95□□□□□ -0.5
LSM2-214ENST00000493387 FAM83CQ9BQN1 747 aa11.95□□□□□ -0.5
LSM2-214ENST00000493387 SNRNP25Q9BV90 132 aaKnown RBP11.95□□□□□ -0.5
LSM2-214ENST00000493387 PLA2G2FQ9BZM2 168 aa11.95□□□□□ -0.5
LSM2-214ENST00000493387 SIK2Q9H0K1 926 aa11.95□□□□□ -0.5
LSM2-214ENST00000493387 RAB6CQ9H0N0 254 aa11.95□□□□□ -0.5
LSM2-214ENST00000493387 DHX35Q9H5Z1 703 aaKnown RBP11.95□□□□□ -0.5
LSM2-214ENST00000493387 BRD9Q9H8M2 597 aa11.95□□□□□ -0.5
LSM2-214ENST00000493387 TRPV5Q9NQA5 729 aa11.95□□□□□ -0.5
LSM2-214ENST00000493387 STIM2Q9P246 746 aa11.95□□□□□ -0.5
LSM2-214ENST00000493387 RCOR3Q9P2K3 495 aaPredicted RBP11.95□□□□□ -0.5
LSM2-214ENST00000493387 PPARGC1AQ9UBK2 798 aaKnown RBP11.95□□□□□ -0.5
LSM2-214ENST00000493387 OR12D3Q9UGF7 316 aa11.95□□□□□ -0.5
LSM2-214ENST00000493387 PCDHA3Q9Y5H8 950 aa11.95□□□□□ -0.5
LSM2-214ENST00000493387 HS3ST4Q9Y661 456 aa11.95□□□□□ -0.5
LSM2-214ENST00000493387 WNT6Q9Y6F9 365 aa11.95□□□□□ -0.5
LSM2-214ENST00000493387 HELZP42694 1942 aaKnown RBP11.94□□□□□ -0.5
LSM2-214ENST00000493387 USP27XA6NNY8 438 aa11.94□□□□□ -0.5
LSM2-214ENST00000493387 H3BRJ5 948 aa11.94□□□□□ -0.5
LSM2-214ENST00000493387 TUBB4AP04350 444 aa11.94□□□□□ -0.5
LSM2-214ENST00000493387 CTNNA1P35221 906 aaKnown RBP11.94□□□□□ -0.5
LSM2-214ENST00000493387 DEKP35659 375 aaKnown RBP11.94□□□□□ -0.5
LSM2-214ENST00000493387 ARL4AP40617 200 aa11.94□□□□□ -0.5
LSM2-214ENST00000493387 CETN2P41208 172 aa11.94□□□□□ -0.5
LSM2-214ENST00000493387 HCAR3P49019 387 aa11.94□□□□□ -0.5
LSM2-214ENST00000493387 AMPD2Q01433 879 aa11.94□□□□□ -0.5
LSM2-214ENST00000493387 PFKPQ01813 784 aa11.94□□□□□ -0.5
LSM2-214ENST00000493387 TDGQ13569 410 aa11.94□□□□□ -0.5
LSM2-214ENST00000493387 GRM2Q14416 872 aa11.94□□□□□ -0.5
LSM2-214ENST00000493387 KRT81Q14533 505 aa11.94□□□□□ -0.5
LSM2-214ENST00000493387 RPS6KA1Q15418 735 aa11.94□□□□□ -0.5
LSM2-214ENST00000493387 DPYSL2Q16555 572 aa11.94□□□□□ -0.5
LSM2-214ENST00000493387 EML3Q32P44 896 aa11.94□□□□□ -0.5
LSM2-214ENST00000493387 C5orf22Q49AR2 442 aa11.94□□□□□ -0.5
LSM2-214ENST00000493387 FAM133BQ5BKY9 247 aaKnown RBP11.94□□□□□ -0.5
LSM2-214ENST00000493387 ZNF569Q5MCW4 686 aa11.94□□□□□ -0.5
LSM2-214ENST00000493387 RAP1GAP2Q684P5 730 aa11.94□□□□□ -0.5
LSM2-214ENST00000493387 NADSYN1Q6IA69 706 aa11.94□□□□□ -0.5
LSM2-214ENST00000493387 CYP4V2Q6ZWL3 525 aaPredicted RBP11.94□□□□□ -0.5
LSM2-214ENST00000493387 CCDC117Q8IWD4 279 aaPredicted RBP11.94□□□□□ -0.5
LSM2-214ENST00000493387 KATNAL2Q8IYT4 538 aa11.94□□□□□ -0.5
LSM2-214ENST00000493387 RCOR2Q8IZ40 523 aa11.94□□□□□ -0.5
LSM2-214ENST00000493387 LGI2Q8N0V4 545 aa11.94□□□□□ -0.5
LSM2-214ENST00000493387 KCTD6Q8NC69 237 aa11.94□□□□□ -0.5
LSM2-214ENST00000493387 HJURPQ8NCD3 748 aaPredicted RBP11.94□□□□□ -0.5
LSM2-214ENST00000493387 HSPH1Q92598 858 aa11.94□□□□□ -0.5
LSM2-214ENST00000493387 RPP25Q9BUL9 199 aaKnown RBP11.94□□□□□ -0.5
LSM2-214ENST00000493387 LINC00597Q9H2U6 94 aa11.94□□□□□ -0.5
LSM2-214ENST00000493387 GOLPH3Q9H4A6 298 aa11.94□□□□□ -0.5
LSM2-214ENST00000493387 PRDM16Q9HAZ2 1276 aa11.94□□□□□ -0.5
LSM2-214ENST00000493387 ANLNQ9NQW6 1124 aa11.94□□□□□ -0.5
LSM2-214ENST00000493387 SPHK2Q9NRA0 654 aa11.94□□□□□ -0.5
LSM2-214ENST00000493387 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.94□□□□□ -0.5
LSM2-214ENST00000493387 MARK1Q9P0L2 795 aa11.94□□□□□ -0.5
LSM2-214ENST00000493387 XPO7Q9UIA9 1087 aaKnown RBP11.94□□□□□ -0.5
LSM2-214ENST00000493387 JRKLQ9Y4A0 524 aa11.94□□□□□ -0.5
LSM2-214ENST00000493387 HYOU1Q9Y4L1 999 aa11.94□□□□□ -0.5
LSM2-214ENST00000493387 IGLV3-10A0A075B6K4 115 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms