RNA–Protein interactions for RNA: ENST00000491581.5

HDAC3-211, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 777 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-211ENST00000491581 SERGEFQ9UGK8 458 aa9.28□□□□□ -0.92
HDAC3-211ENST00000491581 KLK13Q9UKR3 277 aa9.28□□□□□ -0.92
HDAC3-211ENST00000491581 ANGPTL2Q9UKU9 493 aa9.28□□□□□ -0.92
HDAC3-211ENST00000491581 STRIP2Q9ULQ0 834 aa9.28□□□□□ -0.92
HDAC3-211ENST00000491581 SLC27A6Q9Y2P4 619 aa9.28□□□□□ -0.92
HDAC3-211ENST00000491581 KMT2BQ9UMN6 2715 aaPredicted RBP9.28□□□□□ -0.92
HDAC3-211ENST00000491581 ASPMQ8IZT6 3477 aa9.28□□□□□ -0.92
HDAC3-211ENST00000491581 DOCK9Q9BZ29 2069 aa9.27□□□□□ -0.93
HDAC3-211ENST00000491581 SYNJ2BP-COX16A0A087WUM0 186 aa9.27□□□□□ -0.93
HDAC3-211ENST00000491581 E5RJQ4 531 aa9.27□□□□□ -0.93
HDAC3-211ENST00000491581 PLK4O00444 970 aa9.27□□□□□ -0.93
HDAC3-211ENST00000491581 PAPSS1O43252 624 aaPredicted RBP9.27□□□□□ -0.93
HDAC3-211ENST00000491581 AP5Z1O43299 807 aa9.27□□□□□ -0.93
HDAC3-211ENST00000491581 SH3BP5O60239 455 aa9.27□□□□□ -0.93
HDAC3-211ENST00000491581 GRAP2O75791 330 aa9.27□□□□□ -0.93
HDAC3-211ENST00000491581 SETSIPP0DME0 302 aa9.27□□□□□ -0.93
HDAC3-211ENST00000491581 NCAM1P13591 858 aa9.27□□□□□ -0.93
HDAC3-211ENST00000491581 CD59P13987 128 aa9.27□□□□□ -0.93
HDAC3-211ENST00000491581 VAV1P15498 845 aa9.27□□□□□ -0.93
HDAC3-211ENST00000491581 TRIM21P19474 475 aaKnown RBP9.27□□□□□ -0.93
HDAC3-211ENST00000491581 TFE3P19532 575 aaPredicted RBP9.27□□□□□ -0.93
HDAC3-211ENST00000491581 CHKAP35790 457 aa9.27□□□□□ -0.93
HDAC3-211ENST00000491581 GPD2P43304 727 aa9.27□□□□□ -0.93
HDAC3-211ENST00000491581 TBX4P57082 545 aa9.27□□□□□ -0.93
HDAC3-211ENST00000491581 LMAN2Q12907 356 aa9.27□□□□□ -0.93
HDAC3-211ENST00000491581 PAK1Q13153 545 aa9.27□□□□□ -0.93
HDAC3-211ENST00000491581 ENPP2Q13822 863 aa9.27□□□□□ -0.93
HDAC3-211ENST00000491581 BECN1Q14457 450 aa9.27□□□□□ -0.93
HDAC3-211ENST00000491581 CNGA2Q16280 664 aa9.27□□□□□ -0.93
HDAC3-211ENST00000491581 PLEKHG6Q3KR16 790 aa9.27□□□□□ -0.93
HDAC3-211ENST00000491581 FNDC3BQ53EP0 1204 aaKnown RBP9.27□□□□□ -0.93
HDAC3-211ENST00000491581 KCNT1Q5JUK3 1230 aa9.27□□□□□ -0.93
HDAC3-211ENST00000491581 PIK3R6Q5UE93 754 aa9.27□□□□□ -0.93
HDAC3-211ENST00000491581 DCAF12L1Q5VU92 463 aa9.27□□□□□ -0.93
HDAC3-211ENST00000491581 RAP1GAP2Q684P5 730 aa9.27□□□□□ -0.93
HDAC3-211ENST00000491581 MBLAC2Q68D91 279 aa9.27□□□□□ -0.93
HDAC3-211ENST00000491581 SERPINA13PQ6UXR4 307 aa9.27□□□□□ -0.93
HDAC3-211ENST00000491581 TRMT11Q7Z4G4 463 aaKnown RBP9.27□□□□□ -0.93
HDAC3-211ENST00000491581 APCDD1Q8J025 514 aa9.27□□□□□ -0.93
HDAC3-211ENST00000491581 OR52K2Q8NGK3 314 aa9.27□□□□□ -0.93
HDAC3-211ENST00000491581 CCDC26Q8TAB7 109 aa9.27□□□□□ -0.93
HDAC3-211ENST00000491581 TMA16Q96EY4 203 aaKnown RBP9.27□□□□□ -0.93
HDAC3-211ENST00000491581 MYO19Q96H55 970 aa9.27□□□□□ -0.93
HDAC3-211ENST00000491581 ZNF419Q96HQ0 510 aaPredicted RBP9.27□□□□□ -0.93
HDAC3-211ENST00000491581 LMLNQ96KR4 655 aa9.27□□□□□ -0.93
HDAC3-211ENST00000491581 CEP63Q96MT8 703 aa9.27□□□□□ -0.93
HDAC3-211ENST00000491581 SCNM1Q9BWG6 230 aa9.27□□□□□ -0.93
HDAC3-211ENST00000491581 TMEM121BQ9BXQ6 578 aaPredicted RBP9.27□□□□□ -0.93
HDAC3-211ENST00000491581 NUSAP1Q9BXS6 441 aaKnown RBP9.27□□□□□ -0.93
HDAC3-211ENST00000491581 ITM2CQ9NQX7 267 aa9.27□□□□□ -0.93
HDAC3-211ENST00000491581 TMPRSS4Q9NRS4 437 aa9.27□□□□□ -0.93
HDAC3-211ENST00000491581 ABCC13Q9NSE7 274 aa9.27□□□□□ -0.93
HDAC3-211ENST00000491581 WSB2Q9NYS7 404 aaPredicted RBP9.27□□□□□ -0.93
HDAC3-211ENST00000491581 COX16Q9P0S2 106 aa9.27□□□□□ -0.93
HDAC3-211ENST00000491581 USP36Q9P275 1121 aaKnown RBP9.27□□□□□ -0.93
HDAC3-211ENST00000491581 EVLQ9UI08 416 aaPredicted RBP9.27□□□□□ -0.93
HDAC3-211ENST00000491581 EIF2B4Q9UI10 523 aaKnown RBP9.27□□□□□ -0.93
HDAC3-211ENST00000491581 GGA2Q9UJY4 613 aa9.27□□□□□ -0.93
HDAC3-211ENST00000491581 SNX10Q9Y5X0 201 aa9.27□□□□□ -0.93
HDAC3-211ENST00000491581 PLXNB3Q9ULL4 1909 aa9.27□□□□□ -0.93
HDAC3-211ENST00000491581 GON4LQ3T8J9 2241 aa9.27□□□□□ -0.93
HDAC3-211ENST00000491581 AKAP13Q12802 2813 aa9.27□□□□□ -0.93
HDAC3-211ENST00000491581 WNT9AO14904 365 aa9.26□□□□□ -0.93
HDAC3-211ENST00000491581 THAP12O43422 761 aa9.26□□□□□ -0.93
HDAC3-211ENST00000491581 ACSL4O60488 711 aa9.26□□□□□ -0.93
HDAC3-211ENST00000491581 NDUFS2O75306 463 aa9.26□□□□□ -0.93
HDAC3-211ENST00000491581 AFPP02771 609 aaKnown RBP9.26□□□□□ -0.93
HDAC3-211ENST00000491581 CYBBP04839 570 aa9.26□□□□□ -0.93
HDAC3-211ENST00000491581 PAEPP09466 180 aa9.26□□□□□ -0.93
HDAC3-211ENST00000491581 PABPC1P11940 636 aaKnown RBP9.26□□□□□ -0.93
HDAC3-211ENST00000491581 TBXAS1P24557 533 aaPredicted RBP9.26□□□□□ -0.93
HDAC3-211ENST00000491581 CD6P30203 668 aa9.26□□□□□ -0.93
HDAC3-211ENST00000491581 USP8P40818 1118 aa9.26□□□□□ -0.93
HDAC3-211ENST00000491581 HARS2P49590 506 aaKnown RBP9.26□□□□□ -0.93
HDAC3-211ENST00000491581 STK19P49842 368 aaPredicted RBP9.26□□□□□ -0.93
HDAC3-211ENST00000491581 RPS14P62263 151 aaKnown RBP9.26□□□□□ -0.93
HDAC3-211ENST00000491581 SIM1P81133 766 aaPredicted RBP9.26□□□□□ -0.93
HDAC3-211ENST00000491581 IL9RQ01113 521 aa9.26□□□□□ -0.93
HDAC3-211ENST00000491581 GRIK2Q13002 908 aa9.26□□□□□ -0.93
HDAC3-211ENST00000491581 SEMA3BQ13214 749 aa9.26□□□□□ -0.93
HDAC3-211ENST00000491581 MPPE1Q53F39 396 aa9.26□□□□□ -0.93
HDAC3-211ENST00000491581 C2CD6Q53TS8 623 aa9.26□□□□□ -0.93
HDAC3-211ENST00000491581 ZC3H12AQ5D1E8 599 aaKnown RBP9.26□□□□□ -0.93
HDAC3-211ENST00000491581 PRAMEF14Q5SWL7 426 aa9.26□□□□□ -0.93
HDAC3-211ENST00000491581 ADGRF1Q5T601 910 aa9.26□□□□□ -0.93
HDAC3-211ENST00000491581 DAB2IPQ5VWQ8 1189 aa9.26□□□□□ -0.93
HDAC3-211ENST00000491581 MSANTD2Q6P1R3 559 aa9.26□□□□□ -0.93
HDAC3-211ENST00000491581 PIP4P1Q86T03 277 aa9.26□□□□□ -0.93
HDAC3-211ENST00000491581 TADA2BQ86TJ2 420 aa9.26□□□□□ -0.93
HDAC3-211ENST00000491581 DHX40Q8IX18 779 aaKnown RBP9.26□□□□□ -0.93
HDAC3-211ENST00000491581 ARHGAP18Q8N392 663 aa9.26□□□□□ -0.93
HDAC3-211ENST00000491581 CARNMT1Q8N4J0 409 aa9.26□□□□□ -0.93
HDAC3-211ENST00000491581 CHCHD4Q8N4Q1 142 aa9.26□□□□□ -0.93
HDAC3-211ENST00000491581 KCNV2Q8TDN2 545 aa9.26□□□□□ -0.93
HDAC3-211ENST00000491581 SNX19Q92543 992 aa9.26□□□□□ -0.93
HDAC3-211ENST00000491581 FAM149B1Q96BN6 582 aa9.26□□□□□ -0.93
HDAC3-211ENST00000491581 SIPA1Q96FS4 1042 aa9.26□□□□□ -0.93
HDAC3-211ENST00000491581 DCLK3Q9C098 648 aa9.26□□□□□ -0.93
HDAC3-211ENST00000491581 TMEM245Q9H330 911 aa9.26□□□□□ -0.93
HDAC3-211ENST00000491581 METTL14Q9HCE5 456 aaKnown RBP9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms