RNA–Protein interactions for RNA: ENST00000490699.1

VARS2-210, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 3

Gene VARS2, Length 719 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-210ENST00000490699 HTR3DQ70Z44 454 aa11.34□□□□□ -0.59
VARS2-210ENST00000490699 NT5DC3Q86UY8 548 aa11.34□□□□□ -0.59
VARS2-210ENST00000490699 SLC35F6Q8N357 371 aa11.34□□□□□ -0.59
VARS2-210ENST00000490699 DEPDC1BQ8WUY9 529 aa11.34□□□□□ -0.59
VARS2-210ENST00000490699 NXPE3Q969Y0 559 aa11.34□□□□□ -0.59
VARS2-210ENST00000490699 ELSPBP1Q96BH3 223 aa11.34□□□□□ -0.59
VARS2-210ENST00000490699 SLC39A13Q96H72 371 aa11.34□□□□□ -0.59
VARS2-210ENST00000490699 SLC22A12Q96S37 553 aa11.34□□□□□ -0.59
VARS2-210ENST00000490699 NAPGQ99747 312 aaPredicted RBP11.34□□□□□ -0.59
VARS2-210ENST00000490699 SNRNP25Q9BV90 132 aaKnown RBP11.34□□□□□ -0.59
VARS2-210ENST00000490699 CALN1Q9BXU9 219 aa11.34□□□□□ -0.59
VARS2-210ENST00000490699 IRX2Q9BZI1 471 aaPredicted RBP11.34□□□□□ -0.59
VARS2-210ENST00000490699 SIK2Q9H0K1 926 aa11.34□□□□□ -0.59
VARS2-210ENST00000490699 GOLPH3Q9H4A6 298 aa11.34□□□□□ -0.59
VARS2-210ENST00000490699 TRPV4Q9HBA0 871 aa11.34□□□□□ -0.59
VARS2-210ENST00000490699 GKN1Q9NS71 199 aa11.34□□□□□ -0.59
VARS2-210ENST00000490699 ARHGEF38Q9NXL2 777 aa11.34□□□□□ -0.59
VARS2-210ENST00000490699 EPS15L1Q9UBC2 864 aa11.34□□□□□ -0.59
VARS2-210ENST00000490699 FZD10Q9ULW2 581 aa11.34□□□□□ -0.59
VARS2-210ENST00000490699 HYOU1Q9Y4L1 999 aa11.34□□□□□ -0.59
VARS2-210ENST00000490699 PCDHA3Q9Y5H8 950 aa11.34□□□□□ -0.59
VARS2-210ENST00000490699 DENND4AQ7Z401 1863 aa11.34□□□□□ -0.59
VARS2-210ENST00000490699 GRXCR2A6NFK2 248 aa11.33□□□□□ -0.6
VARS2-210ENST00000490699 ESPNB1AK53 854 aa11.33□□□□□ -0.6
VARS2-210ENST00000490699 CREB3O43889 395 aa11.33□□□□□ -0.6
VARS2-210ENST00000490699 ECI2O75521 394 aa11.33□□□□□ -0.6
VARS2-210ENST00000490699 PRAMEF12O95522 483 aa11.33□□□□□ -0.6
VARS2-210ENST00000490699 NFATC1O95644 943 aa11.33□□□□□ -0.6
VARS2-210ENST00000490699 KCNQ1P51787 676 aa11.33□□□□□ -0.6
VARS2-210ENST00000490699 ATXN1P54253 815 aaKnown RBP11.33□□□□□ -0.6
VARS2-210ENST00000490699 COPS2P61201 443 aa11.33□□□□□ -0.6
VARS2-210ENST00000490699 ETF1P62495 437 aaKnown RBP11.33□□□□□ -0.6
VARS2-210ENST00000490699 SLC25A11Q02978 314 aaKnown RBP11.33□□□□□ -0.6
VARS2-210ENST00000490699 USP4Q13107 963 aa11.33□□□□□ -0.6
VARS2-210ENST00000490699 NR1H3Q13133 447 aa11.33□□□□□ -0.6
VARS2-210ENST00000490699 PDGFRLQ15198 375 aa11.33□□□□□ -0.6
VARS2-210ENST00000490699 SMAD2Q15796 467 aaKnown RBP11.33□□□□□ -0.6
VARS2-210ENST00000490699 ADGRF1Q5T601 910 aa11.33□□□□□ -0.6
VARS2-210ENST00000490699 MEI1Q5TIA1 1274 aa11.33□□□□□ -0.6
VARS2-210ENST00000490699 CCDC181Q5TID7 509 aa11.33□□□□□ -0.6
VARS2-210ENST00000490699 OTUD1Q5VV17 481 aaPredicted RBP11.33□□□□□ -0.6
VARS2-210ENST00000490699 RWDD4Q6NW29 188 aaKnown RBP11.33□□□□□ -0.6
VARS2-210ENST00000490699 BNIPLQ7Z465 357 aa11.33□□□□□ -0.6
VARS2-210ENST00000490699 KATNAL2Q8IYT4 538 aa11.33□□□□□ -0.6
VARS2-210ENST00000490699 RCOR2Q8IZ40 523 aa11.33□□□□□ -0.6
VARS2-210ENST00000490699 C17orf53Q8N3J3 647 aaPredicted RBP11.33□□□□□ -0.6
VARS2-210ENST00000490699 CCDC185Q8N715 623 aa11.33□□□□□ -0.6
VARS2-210ENST00000490699 ZNF557Q8N988 423 aaPredicted RBP11.33□□□□□ -0.6
VARS2-210ENST00000490699 EXD1Q8NHP7 514 aa11.33□□□□□ -0.6
VARS2-210ENST00000490699 ATP2A3Q93084 1043 aa11.33□□□□□ -0.6
VARS2-210ENST00000490699 EXOC4Q96A65 974 aa11.33□□□□□ -0.6
VARS2-210ENST00000490699 TBC1D31Q96DN5 1066 aa11.33□□□□□ -0.6
VARS2-210ENST00000490699 RPGRIP1Q96KN7 1286 aa11.33□□□□□ -0.6
VARS2-210ENST00000490699 C1orf74Q96LT6 269 aa11.33□□□□□ -0.6
VARS2-210ENST00000490699 ZSWIM3Q96MP5 696 aa11.33□□□□□ -0.6
VARS2-210ENST00000490699 MYADMQ96S97 322 aa11.33□□□□□ -0.6
VARS2-210ENST00000490699 SMG9Q9H0W8 520 aaKnown RBP11.33□□□□□ -0.6
VARS2-210ENST00000490699 OSBPL2Q9H1P3 480 aa11.33□□□□□ -0.6
VARS2-210ENST00000490699 CATSPERBQ9H7T0 1116 aa11.33□□□□□ -0.6
VARS2-210ENST00000490699 DUS2Q9NX74 493 aaKnown RBP11.33□□□□□ -0.6
VARS2-210ENST00000490699 RCOR3Q9P2K3 495 aaPredicted RBP11.33□□□□□ -0.6
VARS2-210ENST00000490699 OR12D3Q9UGF7 316 aa11.33□□□□□ -0.6
VARS2-210ENST00000490699 DNAI1Q9UI46 699 aa11.33□□□□□ -0.6
VARS2-210ENST00000490699 CDH22Q9UJ99 828 aa11.33□□□□□ -0.6
VARS2-210ENST00000490699 NOTCH4Q99466 2003 aa11.32□□□□□ -0.6
VARS2-210ENST00000490699 HEPACAM2A8MVW5 462 aa11.32□□□□□ -0.6
VARS2-210ENST00000490699 EEF2KO00418 725 aaKnown RBP11.32□□□□□ -0.6
VARS2-210ENST00000490699 KCNK3O14649 394 aa11.32□□□□□ -0.6
VARS2-210ENST00000490699 FGF10O15520 208 aaPredicted RBP11.32□□□□□ -0.6
VARS2-210ENST00000490699 SRGAP2O75044 1071 aa11.32□□□□□ -0.6
VARS2-210ENST00000490699 ADH1CP00326 375 aa11.32□□□□□ -0.6
VARS2-210ENST00000490699 RARAP10276 462 aa11.32□□□□□ -0.6
VARS2-210ENST00000490699 ZFXP17010 805 aaPredicted RBP11.32□□□□□ -0.6
VARS2-210ENST00000490699 PSMC3P17980 439 aa11.32□□□□□ -0.6
VARS2-210ENST00000490699 TCP1P17987 556 aaKnown RBP11.32□□□□□ -0.6
VARS2-210ENST00000490699 SP100P23497 879 aaPredicted RBP11.32□□□□□ -0.6
VARS2-210ENST00000490699 L1CAMP32004 1257 aa11.32□□□□□ -0.6
VARS2-210ENST00000490699 TAS2R40P59535 323 aa11.32□□□□□ -0.6
VARS2-210ENST00000490699 AMPD2Q01433 879 aa11.32□□□□□ -0.6
VARS2-210ENST00000490699 ZNF77Q15935 545 aa11.32□□□□□ -0.6
VARS2-210ENST00000490699 DPYSL2Q16555 572 aa11.32□□□□□ -0.6
VARS2-210ENST00000490699 MPPE1Q53F39 396 aa11.32□□□□□ -0.6
VARS2-210ENST00000490699 KCNT1Q5JUK3 1230 aa11.32□□□□□ -0.6
VARS2-210ENST00000490699 DAB2IPQ5VWQ8 1189 aa11.32□□□□□ -0.6
VARS2-210ENST00000490699 RAP1GAP2Q684P5 730 aa11.32□□□□□ -0.6
VARS2-210ENST00000490699 SYT10Q6XYQ8 523 aa11.32□□□□□ -0.6
VARS2-210ENST00000490699 CPA6Q8N4T0 437 aa11.32□□□□□ -0.6
VARS2-210ENST00000490699 HJURPQ8NCD3 748 aaPredicted RBP11.32□□□□□ -0.6
VARS2-210ENST00000490699 ZNF592Q92610 1267 aa11.32□□□□□ -0.6
VARS2-210ENST00000490699 HES6Q96HZ4 224 aa11.32□□□□□ -0.6
VARS2-210ENST00000490699 ZFRQ96KR1 1074 aaKnown RBP11.32□□□□□ -0.6
VARS2-210ENST00000490699 RPRD1AQ96P16 312 aaPredicted RBP11.32□□□□□ -0.6
VARS2-210ENST00000490699 NAP1L3Q99457 506 aaPredicted RBP11.32□□□□□ -0.6
VARS2-210ENST00000490699 ZNF670Q9BS34 389 aa11.32□□□□□ -0.6
VARS2-210ENST00000490699 RETREG1Q9H6L5 497 aa11.32□□□□□ -0.6
VARS2-210ENST00000490699 PRDM16Q9HAZ2 1276 aa11.32□□□□□ -0.6
VARS2-210ENST00000490699 IGSF9Q9P2J2 1179 aa11.32□□□□□ -0.6
VARS2-210ENST00000490699 AGO1Q9UL18 857 aaKnown RBP11.32□□□□□ -0.6
VARS2-210ENST00000490699 CCL26Q9Y258 94 aa11.32□□□□□ -0.6
VARS2-210ENST00000490699 E9PAM4 449 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms