RNA–Protein interactions for RNA: ENST00000490564.1

NINJ1-205, Transcript of ninjurin 1, humanhuman

TSL 1 (best)

Gene NINJ1, Length 488 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NINJ1-205ENST00000490564 GABRB2P47870 512 aa10.85□□□□□ -0.67
NINJ1-205ENST00000490564 POLR2FP61218 127 aaKnown RBP10.85□□□□□ -0.67
NINJ1-205ENST00000490564 PITX1P78337 314 aaPredicted RBP10.85□□□□□ -0.67
NINJ1-205ENST00000490564 CSRP2Q16527 193 aa10.85□□□□□ -0.67
NINJ1-205ENST00000490564 ANO6Q4KMQ2 910 aa10.85□□□□□ -0.67
NINJ1-205ENST00000490564 DCAF6Q58WW2 860 aa10.85□□□□□ -0.67
NINJ1-205ENST00000490564 TAF3Q5VWG9 929 aa10.85□□□□□ -0.67
NINJ1-205ENST00000490564 PMS2CLQ68D20 193 aa10.85□□□□□ -0.67
NINJ1-205ENST00000490564 TMEM215Q68D42 235 aa10.85□□□□□ -0.67
NINJ1-205ENST00000490564 KIAA1211LQ6NV74 962 aa10.85□□□□□ -0.67
NINJ1-205ENST00000490564 RFWD3Q6PCD5 774 aa10.85□□□□□ -0.67
NINJ1-205ENST00000490564 SLC26A9Q7LBE3 791 aa10.85□□□□□ -0.67
NINJ1-205ENST00000490564 ZNF677Q86XU0 584 aa10.85□□□□□ -0.67
NINJ1-205ENST00000490564 AOPEPQ8N6M6 819 aa10.85□□□□□ -0.67
NINJ1-205ENST00000490564 ZNF557Q8N988 423 aaPredicted RBP10.85□□□□□ -0.67
NINJ1-205ENST00000490564 WFIKKN2Q8TEU8 576 aa10.85□□□□□ -0.67
NINJ1-205ENST00000490564 UCMAQ8WVF2 138 aa10.85□□□□□ -0.67
NINJ1-205ENST00000490564 HMGB4Q8WW32 186 aa10.85□□□□□ -0.67
NINJ1-205ENST00000490564 PRICKLE1Q96MT3 831 aaPredicted RBP10.85□□□□□ -0.67
NINJ1-205ENST00000490564 ERGIC2Q96RQ1 377 aa10.85□□□□□ -0.67
NINJ1-205ENST00000490564 FUCA2Q9BTY2 467 aa10.85□□□□□ -0.67
NINJ1-205ENST00000490564 NUCKS1Q9H1E3 243 aaKnown RBP10.85□□□□□ -0.67
NINJ1-205ENST00000490564 PDCL3Q9H2J4 239 aa10.85□□□□□ -0.67
NINJ1-205ENST00000490564 FAM207AQ9NSI2 230 aaPredicted RBP10.85□□□□□ -0.67
NINJ1-205ENST00000490564 SEMA4GQ9NTN9 838 aa10.85□□□□□ -0.67
NINJ1-205ENST00000490564 ELOVL2Q9NXB9 296 aa10.85□□□□□ -0.67
NINJ1-205ENST00000490564 BCCIPQ9P287 314 aaKnown RBP eCLIP10.85□□□□□ -0.67
NINJ1-205ENST00000490564 USP18Q9UMW8 372 aa10.85□□□□□ -0.67
NINJ1-205ENST00000490564 PCDHGA5Q9Y5G8 931 aa10.85□□□□□ -0.67
NINJ1-205ENST00000490564 RAD54BQ9Y620 910 aa10.85□□□□□ -0.67
NINJ1-205ENST00000490564 STON1Q9Y6Q2 735 aa10.85□□□□□ -0.67
NINJ1-205ENST00000490564 SDK1Q7Z5N4 2213 aa10.84□□□□□ -0.67
NINJ1-205ENST00000490564 PTPRZ1P23471 2315 aaPredicted RBP10.84□□□□□ -0.67
NINJ1-205ENST00000490564 CEP250Q9BV73 2442 aa10.84□□□□□ -0.67
NINJ1-205ENST00000490564 KCNU1A8MYU2 1149 aa10.84□□□□□ -0.67
NINJ1-205ENST00000490564 WASH3PC4AMC7 463 aa10.84□□□□□ -0.67
NINJ1-205ENST00000490564 TIMM44O43615 452 aa10.84□□□□□ -0.67
NINJ1-205ENST00000490564 GRAP2O75791 330 aa10.84□□□□□ -0.67
NINJ1-205ENST00000490564 GFPT2O94808 682 aa10.84□□□□□ -0.67
NINJ1-205ENST00000490564 MOCS2O96007 188 aaPredicted RBP10.84□□□□□ -0.67
NINJ1-205ENST00000490564 MMEP08473 750 aa10.84□□□□□ -0.67
NINJ1-205ENST00000490564 BCKDHBP21953 392 aa10.84□□□□□ -0.67
NINJ1-205ENST00000490564 GBP1P32455 592 aa10.84□□□□□ -0.67
NINJ1-205ENST00000490564 SOX5P35711 763 aa10.84□□□□□ -0.67
NINJ1-205ENST00000490564 SCNN1AP37088 669 aa10.84□□□□□ -0.67
NINJ1-205ENST00000490564 IL12RB1P42701 662 aa10.84□□□□□ -0.67
NINJ1-205ENST00000490564 NOMO3P69849 1222 aa10.84□□□□□ -0.67
NINJ1-205ENST00000490564 CDK17Q00537 523 aa10.84□□□□□ -0.67
NINJ1-205ENST00000490564 LMNB2Q03252 620 aa10.84□□□□□ -0.67
NINJ1-205ENST00000490564 UBXN1Q04323 297 aa10.84□□□□□ -0.67
NINJ1-205ENST00000490564 BYSLQ13895 437 aaKnown RBP10.84□□□□□ -0.67
NINJ1-205ENST00000490564 ZNF234Q14588 700 aa10.84□□□□□ -0.67
NINJ1-205ENST00000490564 SYCP1Q15431 976 aa10.84□□□□□ -0.67
NINJ1-205ENST00000490564 ELF2Q15723 593 aa10.84□□□□□ -0.67
NINJ1-205ENST00000490564 MAP7D1Q3KQU3 841 aa10.84□□□□□ -0.67
NINJ1-205ENST00000490564 ZC3H12AQ5D1E8 599 aaKnown RBP10.84□□□□□ -0.67
NINJ1-205ENST00000490564 MS4A13Q5J8X5 152 aa10.84□□□□□ -0.67
NINJ1-205ENST00000490564 PLA2G2CQ5R387 149 aa10.84□□□□□ -0.67
NINJ1-205ENST00000490564 DHX40Q8IX18 779 aaKnown RBP10.84□□□□□ -0.67
NINJ1-205ENST00000490564 AHI1Q8N157 1196 aa10.84□□□□□ -0.67
NINJ1-205ENST00000490564 ATP6V0D2Q8N8Y2 350 aa10.84□□□□□ -0.67
NINJ1-205ENST00000490564 HJURPQ8NCD3 748 aaPredicted RBP10.84□□□□□ -0.67
NINJ1-205ENST00000490564 WFDC5Q8TCV5 224 aa10.84□□□□□ -0.67
NINJ1-205ENST00000490564 MYEOVQ96EZ4 313 aa10.84□□□□□ -0.67
NINJ1-205ENST00000490564 BTN2A3PQ96KV6 586 aa10.84□□□□□ -0.67
NINJ1-205ENST00000490564 SPACA7Q96KW9 195 aa10.84□□□□□ -0.67
NINJ1-205ENST00000490564 ARRDC1-AS1Q9H2J1 176 aa10.84□□□□□ -0.67
NINJ1-205ENST00000490564 SYNCQ9H7C4 482 aa10.84□□□□□ -0.67
NINJ1-205ENST00000490564 FAM204AQ9H8W3 233 aa10.84□□□□□ -0.67
NINJ1-205ENST00000490564 NLRC4Q9NPP4 1024 aa10.84□□□□□ -0.67
NINJ1-205ENST00000490564 SLTMQ9NWH9 1034 aaKnown RBP eCLIP10.84□□□□□ -0.67
NINJ1-205ENST00000490564 CACNA2D2Q9NY47 1150 aa10.84□□□□□ -0.67
NINJ1-205ENST00000490564 RRN3Q9NYV6 651 aa10.84□□□□□ -0.67
NINJ1-205ENST00000490564 XPO7Q9UIA9 1087 aaKnown RBP10.84□□□□□ -0.67
NINJ1-205ENST00000490564 GGA2Q9UJY4 613 aa10.84□□□□□ -0.67
NINJ1-205ENST00000490564 NOCTQ9UK39 431 aaKnown RBP10.84□□□□□ -0.67
NINJ1-205ENST00000490564 INVSQ9Y283 1065 aa10.84□□□□□ -0.67
NINJ1-205ENST00000490564 FAM170AA1A519 330 aa10.83□□□□□ -0.68
NINJ1-205ENST00000490564 TYW5A2RUC4 315 aaKnown RBP10.83□□□□□ -0.68
NINJ1-205ENST00000490564 SMTNL1A8MU46 457 aa10.83□□□□□ -0.68
NINJ1-205ENST00000490564 PRR5-ARHGAP8B1AHC4 643 aa10.83□□□□□ -0.68
NINJ1-205ENST00000490564 FOXD2O60548 495 aaPredicted RBP10.83□□□□□ -0.68
NINJ1-205ENST00000490564 CYP1A1P04798 512 aaPredicted RBP10.83□□□□□ -0.68
NINJ1-205ENST00000490564 SLC2A3P11169 496 aa10.83□□□□□ -0.68
NINJ1-205ENST00000490564 PABPC1P11940 636 aaKnown RBP10.83□□□□□ -0.68
NINJ1-205ENST00000490564 ATP1A3P13637 1013 aa10.83□□□□□ -0.68
NINJ1-205ENST00000490564 NDUFV2P19404 249 aa10.83□□□□□ -0.68
NINJ1-205ENST00000490564 TACR2P21452 398 aa10.83□□□□□ -0.68
NINJ1-205ENST00000490564 CCR1P32246 355 aa10.83□□□□□ -0.68
NINJ1-205ENST00000490564 CD70P32970 193 aa10.83□□□□□ -0.68
NINJ1-205ENST00000490564 NOS2P35228 1153 aa10.83□□□□□ -0.68
NINJ1-205ENST00000490564 STAT1P42224 750 aa10.83□□□□□ -0.68
NINJ1-205ENST00000490564 MATKP42679 507 aa10.83□□□□□ -0.68
NINJ1-205ENST00000490564 ID4P47928 161 aa10.83□□□□□ -0.68
NINJ1-205ENST00000490564 ARHGAP8P85298 464 aa10.83□□□□□ -0.68
NINJ1-205ENST00000490564 FMO1Q01740 532 aa10.83□□□□□ -0.68
NINJ1-205ENST00000490564 CDR2Q01850 454 aa10.83□□□□□ -0.68
NINJ1-205ENST00000490564 MTA1Q13330 715 aa10.83□□□□□ -0.68
NINJ1-205ENST00000490564 STARD3Q14849 445 aa10.83□□□□□ -0.68
NINJ1-205ENST00000490564 KLHL40Q2TBA0 621 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms