RNA–Protein interactions for RNA: ENST00000490516.5

EXOSC3-207, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 773 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-207ENST00000490516 DUOXA2Q1HG44 320 aa14.35□□□□□ -0.11
EXOSC3-207ENST00000490516 WDR72Q3MJ13 1102 aa14.35□□□□□ -0.11
EXOSC3-207ENST00000490516 SGO2Q562F6 1265 aa14.35□□□□□ -0.11
EXOSC3-207ENST00000490516 C10orf120Q5SQS8 335 aa14.35□□□□□ -0.11
EXOSC3-207ENST00000490516 ZNF776Q68DI1 518 aaPredicted RBP14.35□□□□□ -0.11
EXOSC3-207ENST00000490516 IGF2-ASQ6U949 168 aa14.35□□□□□ -0.11
EXOSC3-207ENST00000490516 CLEC18BQ6UXF7 455 aa14.35□□□□□ -0.11
EXOSC3-207ENST00000490516 DYMQ7RTS9 669 aa14.35□□□□□ -0.11
EXOSC3-207ENST00000490516 GPRIN1Q7Z2K8 1008 aa14.35□□□□□ -0.11
EXOSC3-207ENST00000490516 SLC25A45Q8N413 288 aa14.35□□□□□ -0.11
EXOSC3-207ENST00000490516 OXR1Q8N573 874 aa14.35□□□□□ -0.11
EXOSC3-207ENST00000490516 CLEC18CQ8NCF0 446 aa14.35□□□□□ -0.11
EXOSC3-207ENST00000490516 RAD54LQ92698 747 aa14.35□□□□□ -0.11
EXOSC3-207ENST00000490516 CCDC97Q96F63 343 aaPredicted RBP14.35□□□□□ -0.11
EXOSC3-207ENST00000490516 SMARCD1Q96GM5 515 aa14.35□□□□□ -0.11
EXOSC3-207ENST00000490516 ACCSQ96QU6 501 aa14.35□□□□□ -0.11
EXOSC3-207ENST00000490516 CCNL2Q96S94 520 aaPredicted RBP14.35□□□□□ -0.11
EXOSC3-207ENST00000490516 NEUROG2Q9H2A3 272 aa14.35□□□□□ -0.11
EXOSC3-207ENST00000490516 PABPC3Q9H361 631 aaKnown RBP14.35□□□□□ -0.11
EXOSC3-207ENST00000490516 FBXO44Q9H4M3 255 aa14.35□□□□□ -0.11
EXOSC3-207ENST00000490516 FBRSQ9HAH7 460 aa14.35□□□□□ -0.11
EXOSC3-207ENST00000490516 FBXL12Q9NXK8 326 aa14.35□□□□□ -0.11
EXOSC3-207ENST00000490516 TBC1D7Q9P0N9 293 aa14.35□□□□□ -0.11
EXOSC3-207ENST00000490516 PLA2G4CQ9UP65 541 aa14.35□□□□□ -0.11
EXOSC3-207ENST00000490516 EXOC7Q9UPT5 735 aa14.35□□□□□ -0.11
EXOSC3-207ENST00000490516 NYNRINQ9P2P1 1898 aaKnown RBP14.35□□□□□ -0.11
EXOSC3-207ENST00000490516 A0A1W2PQH9 124 aa14.34□□□□□ -0.11
EXOSC3-207ENST00000490516 TNNC1P63316 161 aa14.34□□□□□ -0.11
EXOSC3-207ENST00000490516 L1TD1Q5T7N2 865 aaKnown RBP14.34□□□□□ -0.11
EXOSC3-207ENST00000490516 USP30Q70CQ3 517 aa14.34□□□□□ -0.11
EXOSC3-207ENST00000490516 TRAPPC11Q7Z392 1133 aa14.34□□□□□ -0.11
EXOSC3-207ENST00000490516 ZC3H3Q8IXZ2 948 aaKnown RBP14.34□□□□□ -0.11
EXOSC3-207ENST00000490516 FUKQ8N0W3 1084 aa14.34□□□□□ -0.11
EXOSC3-207ENST00000490516 DDI1Q8WTU0 396 aa14.34□□□□□ -0.11
EXOSC3-207ENST00000490516 GOLGA1Q92805 767 aa14.34□□□□□ -0.11
EXOSC3-207ENST00000490516 PRR11Q96HE9 360 aaPredicted RBP14.34□□□□□ -0.11
EXOSC3-207ENST00000490516 SLC2A11Q9BYW1 496 aa14.34□□□□□ -0.11
EXOSC3-207ENST00000490516 MRPL44Q9H9J2 332 aaKnown RBP14.34□□□□□ -0.11
EXOSC3-207ENST00000490516 MTPAPQ9NVV4 582 aaKnown RBP eCLIP14.34□□□□□ -0.11
EXOSC3-207ENST00000490516 AGO1Q9UL18 857 aaKnown RBP14.34□□□□□ -0.11
EXOSC3-207ENST00000490516 SRPK3Q9UPE1 567 aa14.34□□□□□ -0.11
EXOSC3-207ENST00000490516 ZNF510Q9Y2H8 683 aa14.34□□□□□ -0.11
EXOSC3-207ENST00000490516 DOPEY1Q5JWR5 2465 aa14.34□□□□□ -0.11
EXOSC3-207ENST00000490516 NBASA2RRP1 2371 aa14.33□□□□□ -0.11
EXOSC3-207ENST00000490516 A0A1W2PP55 124 aa14.33□□□□□ -0.12
EXOSC3-207ENST00000490516 LRRC72A6NJI9 287 aa14.33□□□□□ -0.12
EXOSC3-207ENST00000490516 C10orf142B7Z368 130 aa14.33□□□□□ -0.12
EXOSC3-207ENST00000490516 CYBBP04839 570 aa14.33□□□□□ -0.12
EXOSC3-207ENST00000490516 FAM163BP0C2L3 166 aa14.33□□□□□ -0.12
EXOSC3-207ENST00000490516 HLA-FP30511 346 aa14.33□□□□□ -0.12
EXOSC3-207ENST00000490516 CORO1AP31146 461 aaKnown RBP14.33□□□□□ -0.12
EXOSC3-207ENST00000490516 CCR10P46092 362 aa14.33□□□□□ -0.12
EXOSC3-207ENST00000490516 CASP5P51878 434 aa14.33□□□□□ -0.12
EXOSC3-207ENST00000490516 MAP3K7CLP57077 242 aa14.33□□□□□ -0.12
EXOSC3-207ENST00000490516 ASIC1P78348 528 aa14.33□□□□□ -0.12
EXOSC3-207ENST00000490516 EHHADHQ08426 723 aa14.33□□□□□ -0.12
EXOSC3-207ENST00000490516 ISXQ2M1V0 245 aa14.33□□□□□ -0.12
EXOSC3-207ENST00000490516 SLC45A4Q5BKX6 768 aa14.33□□□□□ -0.12
EXOSC3-207ENST00000490516 KLHDC10Q6PID8 442 aa14.33□□□□□ -0.12
EXOSC3-207ENST00000490516 FOXR1Q6PIV2 292 aa14.33□□□□□ -0.12
EXOSC3-207ENST00000490516 XKR5Q6UX68 686 aa14.33□□□□□ -0.12
EXOSC3-207ENST00000490516 CHST9Q7L1S5 443 aa14.33□□□□□ -0.12
EXOSC3-207ENST00000490516 DENND1CQ8IV53 801 aa14.33□□□□□ -0.12
EXOSC3-207ENST00000490516 GPD1LQ8N335 351 aa14.33□□□□□ -0.12
EXOSC3-207ENST00000490516 OR2T34Q8NGX1 318 aa14.33□□□□□ -0.12
EXOSC3-207ENST00000490516 CALML4Q96GE6 196 aa14.33□□□□□ -0.12
EXOSC3-207ENST00000490516 ATXN7L3BQ96GX2 97 aa14.33□□□□□ -0.12
EXOSC3-207ENST00000490516 RSPH9Q9H1X1 276 aaPredicted RBP14.33□□□□□ -0.12
EXOSC3-207ENST00000490516 CAAP1Q9H8G2 361 aa14.33□□□□□ -0.12
EXOSC3-207ENST00000490516 SCML2Q9UQR0 700 aa14.33□□□□□ -0.12
EXOSC3-207ENST00000490516 ICE1Q9Y2F5 2266 aa14.32□□□□□ -0.12
EXOSC3-207ENST00000490516 BLACEA4D250 179 aa14.32□□□□□ -0.12
EXOSC3-207ENST00000490516 CDRT15L2A8MXV6 281 aa14.32□□□□□ -0.12
EXOSC3-207ENST00000490516 MID1O15344 667 aa14.32□□□□□ -0.12
EXOSC3-207ENST00000490516 FFAR2O15552 330 aa14.32□□□□□ -0.12
EXOSC3-207ENST00000490516 RNASEH2AO75792 299 aaKnown RBP14.32□□□□□ -0.12
EXOSC3-207ENST00000490516 CENPBP07199 599 aaPredicted RBP14.32□□□□□ -0.12
EXOSC3-207ENST00000490516 CKMT1AP12532 417 aa14.32□□□□□ -0.12
EXOSC3-207ENST00000490516 CCDC130P13994 396 aa14.32□□□□□ -0.12
EXOSC3-207ENST00000490516 CCR5P51681 352 aa14.32□□□□□ -0.12
EXOSC3-207ENST00000490516 SRSF6Q13247 344 aaKnown RBP14.32□□□□□ -0.12
EXOSC3-207ENST00000490516 IGFBP7Q16270 282 aa14.32□□□□□ -0.12
EXOSC3-207ENST00000490516 USP53Q70EK8 1073 aa14.32□□□□□ -0.12
EXOSC3-207ENST00000490516 ADIPOR2Q86V24 386 aa14.32□□□□□ -0.12
EXOSC3-207ENST00000490516 CBWD2Q8IUF1 395 aa14.32□□□□□ -0.12
EXOSC3-207ENST00000490516 SYCP3Q8IZU3 236 aa14.32□□□□□ -0.12
EXOSC3-207ENST00000490516 OR4C6Q8NH72 309 aa14.32□□□□□ -0.12
EXOSC3-207ENST00000490516 JAKMIP2Q96AA8 810 aa14.32□□□□□ -0.12
EXOSC3-207ENST00000490516 ABCG4Q9H172 646 aa14.32□□□□□ -0.12
EXOSC3-207ENST00000490516 SMYD3Q9H7B4 428 aa14.32□□□□□ -0.12
EXOSC3-207ENST00000490516 UCKL1Q9NWZ5 548 aa14.32□□□□□ -0.12
EXOSC3-207ENST00000490516 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.32□□□□□ -0.12
EXOSC3-207ENST00000490516 ZFC3H1O60293 1989 aaKnown RBP14.31□□□□□ -0.12
EXOSC3-207ENST00000490516 SPTBN1Q01082 2364 aaKnown RBP14.31□□□□□ -0.12
EXOSC3-207ENST00000490516 GCNT3O95395 438 aa14.31□□□□□ -0.12
EXOSC3-207ENST00000490516 DGKAP23743 735 aa14.31□□□□□ -0.12
EXOSC3-207ENST00000490516 HOXD9P28356 352 aaPredicted RBP14.31□□□□□ -0.12
EXOSC3-207ENST00000490516 PPP2CBP62714 309 aa14.31□□□□□ -0.12
EXOSC3-207ENST00000490516 PPP2CAP67775 309 aa14.31□□□□□ -0.12
EXOSC3-207ENST00000490516 CENPQQ7L2Z9 268 aaPredicted RBP14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms