RNA–Protein interactions for RNA: ENST00000490283.1

SEC13-218, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 740 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-218ENST00000490283 KIAA1324Q6UXG2 1013 aaKnown RBP18.12■□□□□ 0.49
SEC13-218ENST00000490283 SERPINA13PQ6UXR4 307 aa18.12■□□□□ 0.49
SEC13-218ENST00000490283 MFN1Q8IWA4 741 aa18.12■□□□□ 0.49
SEC13-218ENST00000490283 AHI1Q8N157 1196 aa18.12■□□□□ 0.49
SEC13-218ENST00000490283 ATP6V0D2Q8N8Y2 350 aa18.12■□□□□ 0.49
SEC13-218ENST00000490283 TMEM35BQ8NCS4 154 aa18.12■□□□□ 0.49
SEC13-218ENST00000490283 RNF34Q969K3 372 aa18.12■□□□□ 0.49
SEC13-218ENST00000490283 ERLEC1Q96DZ1 483 aa18.12■□□□□ 0.49
SEC13-218ENST00000490283 CPXM1Q96SM3 734 aa18.12■□□□□ 0.49
SEC13-218ENST00000490283 ABCB8Q9NUT2 735 aa18.12■□□□□ 0.49
SEC13-218ENST00000490283 STIM2Q9P246 746 aa18.12■□□□□ 0.49
SEC13-218ENST00000490283 CLEC4EQ9ULY5 219 aa18.12■□□□□ 0.49
SEC13-218ENST00000490283 FHOD1Q9Y613 1164 aa18.12■□□□□ 0.49
SEC13-218ENST00000490283 GOLGA6L7A0A1B0GV03 622 aa18.11■□□□□ 0.49
SEC13-218ENST00000490283 WASH3PC4AMC7 463 aa18.11■□□□□ 0.49
SEC13-218ENST00000490283 ATP5BP06576 529 aaKnown RBP18.11■□□□□ 0.49
SEC13-218ENST00000490283 SLC2A3P11169 496 aa18.11■□□□□ 0.49
SEC13-218ENST00000490283 PABPC1P11940 636 aaKnown RBP18.11■□□□□ 0.49
SEC13-218ENST00000490283 UCHL3P15374 230 aa18.11■□□□□ 0.49
SEC13-218ENST00000490283 HLA-FP30511 346 aa18.11■□□□□ 0.49
SEC13-218ENST00000490283 CLCN1P35523 988 aa18.11■□□□□ 0.49
SEC13-218ENST00000490283 IL12RB1P42701 662 aa18.11■□□□□ 0.49
SEC13-218ENST00000490283 ATXN1P54253 815 aaKnown RBP18.11■□□□□ 0.49
SEC13-218ENST00000490283 RPL6Q02878 288 aaKnown RBP18.11■□□□□ 0.49
SEC13-218ENST00000490283 KCNMA1Q12791 1236 aa18.11■□□□□ 0.49
SEC13-218ENST00000490283 ZNF234Q14588 700 aa18.11■□□□□ 0.49
SEC13-218ENST00000490283 FNDC3BQ53EP0 1204 aaKnown RBP18.11■□□□□ 0.49
SEC13-218ENST00000490283 FAM133BQ5BKY9 247 aaKnown RBP18.11■□□□□ 0.49
SEC13-218ENST00000490283 CDKAL1Q5VV42 579 aa18.11■□□□□ 0.49
SEC13-218ENST00000490283 IL31Q6EBC2 164 aa18.11■□□□□ 0.49
SEC13-218ENST00000490283 KIAA1211LQ6NV74 962 aa18.11■□□□□ 0.49
SEC13-218ENST00000490283 CHST9Q7L1S5 443 aa18.11■□□□□ 0.49
SEC13-218ENST00000490283 ZDHHC17Q8IUH5 632 aa18.11■□□□□ 0.49
SEC13-218ENST00000490283 MSANTD4Q8NCY6 345 aa18.11■□□□□ 0.49
SEC13-218ENST00000490283 SLC39A13Q96H72 371 aa18.11■□□□□ 0.49
SEC13-218ENST00000490283 BTN2A3PQ96KV6 586 aa18.11■□□□□ 0.49
SEC13-218ENST00000490283 STK33Q9BYT3 514 aa18.11■□□□□ 0.49
SEC13-218ENST00000490283 VPS16Q9H269 839 aa18.11■□□□□ 0.49
SEC13-218ENST00000490283 PLCB1Q9NQ66 1216 aa18.11■□□□□ 0.49
SEC13-218ENST00000490283 SLTMQ9NWH9 1034 aaKnown RBP eCLIP18.11■□□□□ 0.49
SEC13-218ENST00000490283 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa18.1■□□□□ 0.49
SEC13-218ENST00000490283 SLC30A4O14863 429 aa18.1■□□□□ 0.49
SEC13-218ENST00000490283 KHNYNO15037 678 aaKnown RBP18.1■□□□□ 0.49
SEC13-218ENST00000490283 EPHX1P07099 455 aa18.1■□□□□ 0.49
SEC13-218ENST00000490283 CYP11B1P15538 503 aa18.1■□□□□ 0.49
SEC13-218ENST00000490283 POLR2EP19388 210 aaKnown RBP18.1■□□□□ 0.49
SEC13-218ENST00000490283 ABCB4P21439 1286 aa18.1■□□□□ 0.49
SEC13-218ENST00000490283 SLC6A4P31645 630 aa18.1■□□□□ 0.49
SEC13-218ENST00000490283 MYL5Q02045 173 aa18.1■□□□□ 0.49
SEC13-218ENST00000490283 MTA1Q13330 715 aa18.1■□□□□ 0.49
SEC13-218ENST00000490283 CDH18Q13634 790 aa18.1■□□□□ 0.49
SEC13-218ENST00000490283 KRT31Q15323 416 aa18.1■□□□□ 0.49
SEC13-218ENST00000490283 LYSMD4Q5XG99 296 aa18.1■□□□□ 0.49
SEC13-218ENST00000490283 FAM183BPQ6ZVS7 135 aa18.1■□□□□ 0.49
SEC13-218ENST00000490283 ARMCX6Q7L4S7 300 aa18.1■□□□□ 0.49
SEC13-218ENST00000490283 CHSY1Q86X52 802 aa18.1■□□□□ 0.49
SEC13-218ENST00000490283 TMEFF1Q8IYR6 380 aa18.1■□□□□ 0.49
SEC13-218ENST00000490283 DEFB106AQ8N104 65 aa18.1■□□□□ 0.49
SEC13-218ENST00000490283 WDTC1Q8N5D0 677 aa18.1■□□□□ 0.49
SEC13-218ENST00000490283 DDX51Q8N8A6 666 aaKnown RBP eCLIP18.1■□□□□ 0.49
SEC13-218ENST00000490283 DDX1Q92499 740 aaKnown RBP18.1■□□□□ 0.49
SEC13-218ENST00000490283 PIGKQ92643 395 aa18.1■□□□□ 0.49
SEC13-218ENST00000490283 MRGPRX1Q96LB2 322 aa18.1■□□□□ 0.49
SEC13-218ENST00000490283 PCMTD1Q96MG8 357 aaPredicted RBP18.1■□□□□ 0.49
SEC13-218ENST00000490283 SMOC1Q9H4F8 434 aa18.1■□□□□ 0.49
SEC13-218ENST00000490283 PRDM16Q9HAZ2 1276 aa18.1■□□□□ 0.49
SEC13-218ENST00000490283 FANCLQ9NW38 375 aa18.1■□□□□ 0.49
SEC13-218ENST00000490283 DDIT4Q9NX09 232 aa18.1■□□□□ 0.49
SEC13-218ENST00000490283 CYP8B1Q9UNU6 501 aa18.1■□□□□ 0.49
SEC13-218ENST00000490283 DAAM1Q9Y4D1 1078 aa18.1■□□□□ 0.49
SEC13-218ENST00000490283 SPAG17Q6Q759 2223 aa18.1■□□□□ 0.49
SEC13-218ENST00000490283 CEP250Q9BV73 2442 aa18.09■□□□□ 0.49
SEC13-218ENST00000490283 SYNJ2BP-COX16A0A087WUM0 186 aa18.09■□□□□ 0.49
SEC13-218ENST00000490283 GDF9O60383 454 aa18.09■□□□□ 0.49
SEC13-218ENST00000490283 NDUFS2O75306 463 aa18.09■□□□□ 0.49
SEC13-218ENST00000490283 ERBB2P04626 1255 aa18.09■□□□□ 0.49
SEC13-218ENST00000490283 ACADMP11310 421 aa18.09■□□□□ 0.49
SEC13-218ENST00000490283 CDK11BP21127 795 aaKnown RBP18.09■□□□□ 0.49
SEC13-218ENST00000490283 CCR1P32246 355 aa18.09■□□□□ 0.49
SEC13-218ENST00000490283 SGSHP51688 502 aa18.09■□□□□ 0.49
SEC13-218ENST00000490283 LIMK1P53667 647 aa18.09■□□□□ 0.49
SEC13-218ENST00000490283 ENPP2Q13822 863 aa18.09■□□□□ 0.49
SEC13-218ENST00000490283 TAF5Q15542 800 aa18.09■□□□□ 0.49
SEC13-218ENST00000490283 FUT11Q495W5 492 aa18.09■□□□□ 0.49
SEC13-218ENST00000490283 PTPN20Q4JDL3 420 aa18.09■□□□□ 0.49
SEC13-218ENST00000490283 ZC3H12AQ5D1E8 599 aaKnown RBP18.09■□□□□ 0.49
SEC13-218ENST00000490283 MS4A13Q5J8X5 152 aa18.09■□□□□ 0.49
SEC13-218ENST00000490283 NADSYN1Q6IA69 706 aa18.09■□□□□ 0.49
SEC13-218ENST00000490283 CARNMT1Q8N4J0 409 aa18.09■□□□□ 0.49
SEC13-218ENST00000490283 SORCS1Q8WY21 1168 aa18.09■□□□□ 0.49
SEC13-218ENST00000490283 SLC2A13Q96QE2 648 aa18.09■□□□□ 0.49
SEC13-218ENST00000490283 NUCKS1Q9H1E3 243 aaKnown RBP18.09■□□□□ 0.49
SEC13-218ENST00000490283 CD248Q9HCU0 757 aa18.09■□□□□ 0.49
SEC13-218ENST00000490283 COX16Q9P0S2 106 aa18.09■□□□□ 0.49
SEC13-218ENST00000490283 MBD1Q9UIS9 605 aaPredicted RBP18.09■□□□□ 0.49
SEC13-218ENST00000490283 SDK1Q7Z5N4 2213 aa18.08■□□□□ 0.49
SEC13-218ENST00000490283 EML5Q05BV3 1969 aa18.08■□□□□ 0.49
SEC13-218ENST00000490283 WDR87Q6ZQQ6 2873 aa18.08■□□□□ 0.48
SEC13-218ENST00000490283 IGHV1OR15-9A0A0B4J2B8 117 aa18.08■□□□□ 0.48
SEC13-218ENST00000490283 F5H5T6 163 aa18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms