RNA–Protein interactions for RNA: ENST00000489961.1

VPS13D-210, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 5

Gene VPS13D, Length 443 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-210ENST00000489961 CD101Q93033 1021 aa11.27□□□□□ -0.61
VPS13D-210ENST00000489961 PBXIP1Q96AQ6 731 aa11.27□□□□□ -0.61
VPS13D-210ENST00000489961 ARHGEF26Q96DR7 871 aa11.27□□□□□ -0.61
VPS13D-210ENST00000489961 TMA16Q96EY4 203 aaKnown RBP11.27□□□□□ -0.61
VPS13D-210ENST00000489961 EIF3CQ99613 913 aaKnown RBP11.27□□□□□ -0.61
VPS13D-210ENST00000489961 P2RY13Q9BPV8 354 aa11.27□□□□□ -0.61
VPS13D-210ENST00000489961 PACSIN1Q9BY11 444 aa11.27□□□□□ -0.61
VPS13D-210ENST00000489961 IP6K2Q9UHH9 426 aa11.27□□□□□ -0.61
VPS13D-210ENST00000489961 XPO7Q9UIA9 1087 aaKnown RBP11.27□□□□□ -0.61
VPS13D-210ENST00000489961 ANAPC7Q9UJX3 599 aa11.27□□□□□ -0.61
VPS13D-210ENST00000489961 EPN1Q9Y6I3 576 aaPredicted RBP11.27□□□□□ -0.61
VPS13D-210ENST00000489961 TTC28Q96AY4 2481 aa11.27□□□□□ -0.61
VPS13D-210ENST00000489961 KIAA1549LQ6ZVL6 1849 aa11.26□□□□□ -0.61
VPS13D-210ENST00000489961 TECTAO75443 2155 aa11.26□□□□□ -0.61
VPS13D-210ENST00000489961 GOLGA6L7A0A1B0GV03 622 aa11.26□□□□□ -0.61
VPS13D-210ENST00000489961 MYO1FO00160 1098 aa11.26□□□□□ -0.61
VPS13D-210ENST00000489961 TRDMT1O14717 391 aaKnown RBP11.26□□□□□ -0.61
VPS13D-210ENST00000489961 NCAM2O15394 837 aa11.26□□□□□ -0.61
VPS13D-210ENST00000489961 NRDCO43847 1150 aa11.26□□□□□ -0.61
VPS13D-210ENST00000489961 CACNG3O60359 315 aa11.26□□□□□ -0.61
VPS13D-210ENST00000489961 TSPAN3O60637 253 aa11.26□□□□□ -0.61
VPS13D-210ENST00000489961 PAGE1O75459 146 aa11.26□□□□□ -0.61
VPS13D-210ENST00000489961 PENKP01210 267 aaPredicted RBP11.26□□□□□ -0.61
VPS13D-210ENST00000489961 CD72P21854 359 aa11.26□□□□□ -0.61
VPS13D-210ENST00000489961 SLC6A4P31645 630 aa11.26□□□□□ -0.61
VPS13D-210ENST00000489961 HDAC4P56524 1084 aa11.26□□□□□ -0.61
VPS13D-210ENST00000489961 GRSF1Q12849 480 aaKnown RBP eCLIP11.26□□□□□ -0.61
VPS13D-210ENST00000489961 PIGHQ14442 188 aaPredicted RBP11.26□□□□□ -0.61
VPS13D-210ENST00000489961 ACAP1Q15027 740 aa11.26□□□□□ -0.61
VPS13D-210ENST00000489961 PON2Q15165 354 aa11.26□□□□□ -0.61
VPS13D-210ENST00000489961 GAB4Q2WGN9 574 aa11.26□□□□□ -0.61
VPS13D-210ENST00000489961 MS4A13Q5J8X5 152 aa11.26□□□□□ -0.61
VPS13D-210ENST00000489961 RABGAP1LQ5R372 815 aa11.26□□□□□ -0.61
VPS13D-210ENST00000489961 MPP7Q5T2T1 576 aa11.26□□□□□ -0.61
VPS13D-210ENST00000489961 PIK3R6Q5UE93 754 aa11.26□□□□□ -0.61
VPS13D-210ENST00000489961 FYB2Q5VWT5 728 aa11.26□□□□□ -0.61
VPS13D-210ENST00000489961 SCYL2Q6P3W7 929 aa11.26□□□□□ -0.61
VPS13D-210ENST00000489961 RFWD3Q6PCD5 774 aa11.26□□□□□ -0.61
VPS13D-210ENST00000489961 TXNDC11Q6PKC3 985 aa11.26□□□□□ -0.61
VPS13D-210ENST00000489961 NUDT18Q6ZVK8 323 aa11.26□□□□□ -0.61
VPS13D-210ENST00000489961 BMP8AQ7Z5Y6 402 aa11.26□□□□□ -0.61
VPS13D-210ENST00000489961 CCDC117Q8IWD4 279 aaPredicted RBP11.26□□□□□ -0.61
VPS13D-210ENST00000489961 SUGP1Q8IWZ8 645 aaKnown RBP11.26□□□□□ -0.61
VPS13D-210ENST00000489961 RHOT2Q8IXI1 618 aa11.26□□□□□ -0.61
VPS13D-210ENST00000489961 LGI2Q8N0V4 545 aa11.26□□□□□ -0.61
VPS13D-210ENST00000489961 HJURPQ8NCD3 748 aaPredicted RBP11.26□□□□□ -0.61
VPS13D-210ENST00000489961 CCDC112Q8NEF3 446 aa11.26□□□□□ -0.61
VPS13D-210ENST00000489961 BHMTQ93088 406 aa11.26□□□□□ -0.61
VPS13D-210ENST00000489961 HAPLN3Q96S86 360 aa11.26□□□□□ -0.61
VPS13D-210ENST00000489961 PNKPQ96T60 521 aa11.26□□□□□ -0.61
VPS13D-210ENST00000489961 C1QTNF1Q9BXJ1 281 aa11.26□□□□□ -0.61
VPS13D-210ENST00000489961 OSBPL6Q9BZF3 934 aa11.26□□□□□ -0.61
VPS13D-210ENST00000489961 TRIM7Q9C029 511 aa11.26□□□□□ -0.61
VPS13D-210ENST00000489961 SIK2Q9H0K1 926 aa11.26□□□□□ -0.61
VPS13D-210ENST00000489961 LTB4R2Q9NPC1 389 aa11.26□□□□□ -0.61
VPS13D-210ENST00000489961 DNAJC17Q9NVM6 304 aaKnown RBP11.26□□□□□ -0.61
VPS13D-210ENST00000489961 PLK2Q9NYY3 685 aa11.26□□□□□ -0.61
VPS13D-210ENST00000489961 DEC1Q9P2X7 70 aa11.26□□□□□ -0.61
VPS13D-210ENST00000489961 LCMT1Q9UIC8 334 aa11.26□□□□□ -0.61
VPS13D-210ENST00000489961 NDRG2Q9UN36 371 aaKnown RBP11.26□□□□□ -0.61
VPS13D-210ENST00000489961 PCDHA13Q9Y5I0 950 aa11.26□□□□□ -0.61
VPS13D-210ENST00000489961 BDP1A6H8Y1 2624 aa11.26□□□□□ -0.61
VPS13D-210ENST00000489961 FAM86C2PA6NEL3 165 aa11.25□□□□□ -0.61
VPS13D-210ENST00000489961 FAM170BA6NMN3 283 aa11.25□□□□□ -0.61
VPS13D-210ENST00000489961 GFRA2O00451 464 aa11.25□□□□□ -0.61
VPS13D-210ENST00000489961 GPR37L1O60883 481 aa11.25□□□□□ -0.61
VPS13D-210ENST00000489961 TBL1XO60907 577 aa11.25□□□□□ -0.61
VPS13D-210ENST00000489961 TULP3O75386 442 aa11.25□□□□□ -0.61
VPS13D-210ENST00000489961 PDGFBP01127 241 aaPredicted RBP11.25□□□□□ -0.61
VPS13D-210ENST00000489961 APODP05090 189 aa11.25□□□□□ -0.61
VPS13D-210ENST00000489961 DRD1P21728 446 aa11.25□□□□□ -0.61
VPS13D-210ENST00000489961 TARSP26639 723 aaKnown RBP11.25□□□□□ -0.61
VPS13D-210ENST00000489961 ADRA1BP35368 520 aa11.25□□□□□ -0.61
VPS13D-210ENST00000489961 OPRD1P41143 372 aa11.25□□□□□ -0.61
VPS13D-210ENST00000489961 GALK1P51570 392 aa11.25□□□□□ -0.61
VPS13D-210ENST00000489961 AIF1P55008 147 aa11.25□□□□□ -0.61
VPS13D-210ENST00000489961 KRT83P78385 493 aa11.25□□□□□ -0.61
VPS13D-210ENST00000489961 ZNF252P-AS1Q0IIN9 211 aa11.25□□□□□ -0.61
VPS13D-210ENST00000489961 LRRC32Q14392 662 aa11.25□□□□□ -0.61
VPS13D-210ENST00000489961 RAB6CQ53S08 254 aa11.25□□□□□ -0.61
VPS13D-210ENST00000489961 TMEM196Q5HYL7 178 aa11.25□□□□□ -0.61
VPS13D-210ENST00000489961 TMEM31Q5JXX7 168 aa11.25□□□□□ -0.61
VPS13D-210ENST00000489961 DGKKQ5KSL6 1271 aa11.25□□□□□ -0.61
VPS13D-210ENST00000489961 TTC39BQ5VTQ0 682 aaPredicted RBP11.25□□□□□ -0.61
VPS13D-210ENST00000489961 LRRC31Q6UY01 552 aa11.25□□□□□ -0.61
VPS13D-210ENST00000489961 RAD9BQ6WBX8 426 aa11.25□□□□□ -0.61
VPS13D-210ENST00000489961 SLFN11Q7Z7L1 901 aa11.25□□□□□ -0.61
VPS13D-210ENST00000489961 TMEM139Q8IV31 216 aa11.25□□□□□ -0.61
VPS13D-210ENST00000489961 ETFBKMTQ8IXQ9 262 aa11.25□□□□□ -0.61
VPS13D-210ENST00000489961 TXLNBQ8N3L3 684 aa11.25□□□□□ -0.61
VPS13D-210ENST00000489961 NAT16Q8N8M0 369 aa11.25□□□□□ -0.61
VPS13D-210ENST00000489961 ZNF557Q8N988 423 aaPredicted RBP11.25□□□□□ -0.61
VPS13D-210ENST00000489961 PJA1Q8NG27 643 aa11.25□□□□□ -0.61
VPS13D-210ENST00000489961 RFFLQ8WZ73 363 aa11.25□□□□□ -0.61
VPS13D-210ENST00000489961 NTAN1Q96AB6 310 aa11.25□□□□□ -0.61
VPS13D-210ENST00000489961 CHFRQ96EP1 664 aa11.25□□□□□ -0.61
VPS13D-210ENST00000489961 C1orf74Q96LT6 269 aa11.25□□□□□ -0.61
VPS13D-210ENST00000489961 PRICKLE1Q96MT3 831 aaPredicted RBP11.25□□□□□ -0.61
VPS13D-210ENST00000489961 PRMT1Q99873 361 aaKnown RBP11.25□□□□□ -0.61
VPS13D-210ENST00000489961 SLC2A11Q9BYW1 496 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms