RNA–Protein interactions for RNA: ENST00000489053.1

HDAC6-232, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-232ENST00000489053 DYNC1LI1Q9Y6G9 523 aaKnown RBP9.48□□□□□ -0.89
HDAC6-232ENST00000489053 STON1Q9Y6Q2 735 aa9.48□□□□□ -0.89
HDAC6-232ENST00000489053 BECN2A8MW95 431 aa9.47□□□□□ -0.89
HDAC6-232ENST00000489053 KHNYNO15037 678 aaKnown RBP9.47□□□□□ -0.89
HDAC6-232ENST00000489053 GRAP2O75791 330 aa9.47□□□□□ -0.89
HDAC6-232ENST00000489053 LSM8O95777 96 aaKnown RBP9.47□□□□□ -0.89
HDAC6-232ENST00000489053 TRUB2O95900 331 aaKnown RBP9.47□□□□□ -0.89
HDAC6-232ENST00000489053 CISD3P0C7P0 127 aa9.47□□□□□ -0.89
HDAC6-232ENST00000489053 PABPC1P11940 636 aaKnown RBP9.47□□□□□ -0.89
HDAC6-232ENST00000489053 HNRNPLP14866 589 aaKnown RBP eCLIP9.47□□□□□ -0.89
HDAC6-232ENST00000489053 CYP11B1P15538 503 aa9.47□□□□□ -0.89
HDAC6-232ENST00000489053 HOXC13P31276 330 aa9.47□□□□□ -0.89
HDAC6-232ENST00000489053 ATXN3P54252 364 aaPredicted RBP9.47□□□□□ -0.89
HDAC6-232ENST00000489053 RNASE9P60153 205 aaKnown RBP9.47□□□□□ -0.89
HDAC6-232ENST00000489053 POLR2FP61218 127 aaKnown RBP9.47□□□□□ -0.89
HDAC6-232ENST00000489053 UBXN1Q04323 297 aa9.47□□□□□ -0.89
HDAC6-232ENST00000489053 NME3Q13232 169 aa9.47□□□□□ -0.89
HDAC6-232ENST00000489053 GEN1Q17RS7 908 aa9.47□□□□□ -0.89
HDAC6-232ENST00000489053 ZC3H12AQ5D1E8 599 aaKnown RBP9.47□□□□□ -0.89
HDAC6-232ENST00000489053 MIIPQ5JXC2 388 aa9.47□□□□□ -0.89
HDAC6-232ENST00000489053 MPP7Q5T2T1 576 aa9.47□□□□□ -0.89
HDAC6-232ENST00000489053 LYSMD4Q5XG99 296 aa9.47□□□□□ -0.89
HDAC6-232ENST00000489053 CHST9Q7L1S5 443 aa9.47□□□□□ -0.89
HDAC6-232ENST00000489053 ZDHHC17Q8IUH5 632 aa9.47□□□□□ -0.89
HDAC6-232ENST00000489053 FAM71AQ8IYT1 594 aa9.47□□□□□ -0.89
HDAC6-232ENST00000489053 LGI2Q8N0V4 545 aa9.47□□□□□ -0.89
HDAC6-232ENST00000489053 GANCQ8TET4 914 aa9.47□□□□□ -0.89
HDAC6-232ENST00000489053 DDX1Q92499 740 aaKnown RBP9.47□□□□□ -0.89
HDAC6-232ENST00000489053 PIGKQ92643 395 aa9.47□□□□□ -0.89
HDAC6-232ENST00000489053 PRCCQ92733 491 aaPredicted RBP9.47□□□□□ -0.89
HDAC6-232ENST00000489053 AZIN2Q96A70 460 aa9.47□□□□□ -0.89
HDAC6-232ENST00000489053 RMDN1Q96DB5 314 aa9.47□□□□□ -0.89
HDAC6-232ENST00000489053 BTN2A3PQ96KV6 586 aa9.47□□□□□ -0.89
HDAC6-232ENST00000489053 PPP1R9BQ96SB3 815 aa9.47□□□□□ -0.89
HDAC6-232ENST00000489053 CPXM1Q96SM3 734 aa9.47□□□□□ -0.89
HDAC6-232ENST00000489053 ACOX2Q99424 681 aa9.47□□□□□ -0.89
HDAC6-232ENST00000489053 GABRG3Q99928 467 aa9.47□□□□□ -0.89
HDAC6-232ENST00000489053 RTKNQ9BST9 563 aa9.47□□□□□ -0.89
HDAC6-232ENST00000489053 NUSAP1Q9BXS6 441 aaKnown RBP9.47□□□□□ -0.89
HDAC6-232ENST00000489053 DUSP15Q9H1R2 295 aaPredicted RBP9.47□□□□□ -0.89
HDAC6-232ENST00000489053 PRDM16Q9HAZ2 1276 aa9.47□□□□□ -0.89
HDAC6-232ENST00000489053 PARD6AQ9NPB6 346 aa9.47□□□□□ -0.89
HDAC6-232ENST00000489053 PLCB1Q9NQ66 1216 aa9.47□□□□□ -0.89
HDAC6-232ENST00000489053 SEPT11Q9NVA2 429 aaKnown RBP9.47□□□□□ -0.89
HDAC6-232ENST00000489053 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.47□□□□□ -0.89
HDAC6-232ENST00000489053 RRN3Q9NYV6 651 aa9.47□□□□□ -0.89
HDAC6-232ENST00000489053 STAP1Q9ULZ2 295 aa9.47□□□□□ -0.89
HDAC6-232ENST00000489053 CYP8B1Q9UNU6 501 aa9.47□□□□□ -0.89
HDAC6-232ENST00000489053 DAAM1Q9Y4D1 1078 aa9.47□□□□□ -0.89
HDAC6-232ENST00000489053 RAD54BQ9Y620 910 aa9.47□□□□□ -0.89
HDAC6-232ENST00000489053 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa9.46□□□□□ -0.9
HDAC6-232ENST00000489053 GOLGA6L7A0A1B0GV03 622 aa9.46□□□□□ -0.9
HDAC6-232ENST00000489053 ANKRD62A6NC57 917 aa9.46□□□□□ -0.9
HDAC6-232ENST00000489053 SMTNL1A8MU46 457 aa9.46□□□□□ -0.9
HDAC6-232ENST00000489053 MEI4A8MW99 385 aa9.46□□□□□ -0.9
HDAC6-232ENST00000489053 F8VZ95 297 aa9.46□□□□□ -0.9
HDAC6-232ENST00000489053 RNASEH1O60930 286 aaKnown RBP9.46□□□□□ -0.9
HDAC6-232ENST00000489053 GFPT2O94808 682 aa9.46□□□□□ -0.9
HDAC6-232ENST00000489053 CFIP05156 583 aa9.46□□□□□ -0.9
HDAC6-232ENST00000489053 CCDC172P0C7W6 258 aa9.46□□□□□ -0.9
HDAC6-232ENST00000489053 ZNF806P0C7X5 589 aa9.46□□□□□ -0.9
HDAC6-232ENST00000489053 PNMA6AP0CW24 399 aaPredicted RBP9.46□□□□□ -0.9
HDAC6-232ENST00000489053 DESP17661 470 aa9.46□□□□□ -0.9
HDAC6-232ENST00000489053 GABRG2P18507 467 aa9.46□□□□□ -0.9
HDAC6-232ENST00000489053 PTMSP20962 102 aa9.46□□□□□ -0.9
HDAC6-232ENST00000489053 HOXD9P28356 352 aaPredicted RBP9.46□□□□□ -0.9
HDAC6-232ENST00000489053 NNMTP40261 264 aa9.46□□□□□ -0.9
HDAC6-232ENST00000489053 P2RY2P41231 377 aa9.46□□□□□ -0.9
HDAC6-232ENST00000489053 STAT1P42224 750 aa9.46□□□□□ -0.9
HDAC6-232ENST00000489053 COPB1P53618 953 aaKnown RBP9.46□□□□□ -0.9
HDAC6-232ENST00000489053 OXCT1P55809 520 aa9.46□□□□□ -0.9
HDAC6-232ENST00000489053 SLC6A3Q01959 620 aa9.46□□□□□ -0.9
HDAC6-232ENST00000489053 TYRO3Q06418 890 aa9.46□□□□□ -0.9
HDAC6-232ENST00000489053 SFSWAPQ12872 951 aaKnown RBP9.46□□□□□ -0.9
HDAC6-232ENST00000489053 ZNF234Q14588 700 aa9.46□□□□□ -0.9
HDAC6-232ENST00000489053 SF3A2Q15428 464 aaKnown RBP9.46□□□□□ -0.9
HDAC6-232ENST00000489053 TTC31Q49AM3 519 aaPredicted RBP9.46□□□□□ -0.9
HDAC6-232ENST00000489053 FILIP1LQ4L180 1135 aa9.46□□□□□ -0.9
HDAC6-232ENST00000489053 SYCP2LQ5T4T6 812 aa9.46□□□□□ -0.9
HDAC6-232ENST00000489053 FAM102AQ5T9C2 384 aaPredicted RBP9.46□□□□□ -0.9
HDAC6-232ENST00000489053 PIK3R6Q5UE93 754 aa9.46□□□□□ -0.9
HDAC6-232ENST00000489053 TTC39BQ5VTQ0 682 aaPredicted RBP9.46□□□□□ -0.9
HDAC6-232ENST00000489053 CDKAL1Q5VV42 579 aa9.46□□□□□ -0.9
HDAC6-232ENST00000489053 SYPL2Q5VXT5 272 aa9.46□□□□□ -0.9
HDAC6-232ENST00000489053 RAP1GAP2Q684P5 730 aa9.46□□□□□ -0.9
HDAC6-232ENST00000489053 PMS2CLQ68D20 193 aa9.46□□□□□ -0.9
HDAC6-232ENST00000489053 MBLAC2Q68D91 279 aa9.46□□□□□ -0.9
HDAC6-232ENST00000489053 RNF43Q68DV7 783 aa9.46□□□□□ -0.9
HDAC6-232ENST00000489053 CAVIN1Q6NZI2 390 aaKnown RBP9.46□□□□□ -0.9
HDAC6-232ENST00000489053 FAM183BPQ6ZVS7 135 aa9.46□□□□□ -0.9
HDAC6-232ENST00000489053 RABEPKQ7Z6M1 372 aa9.46□□□□□ -0.9
HDAC6-232ENST00000489053 ZNF677Q86XU0 584 aa9.46□□□□□ -0.9
HDAC6-232ENST00000489053 CACUL1Q86Y37 369 aa9.46□□□□□ -0.9
HDAC6-232ENST00000489053 FAM217AQ8IXS0 508 aa9.46□□□□□ -0.9
HDAC6-232ENST00000489053 TMEFF1Q8IYR6 380 aa9.46□□□□□ -0.9
HDAC6-232ENST00000489053 RGL4Q8IZJ4 473 aa9.46□□□□□ -0.9
HDAC6-232ENST00000489053 DEFB106AQ8N104 65 aa9.46□□□□□ -0.9
HDAC6-232ENST00000489053 AOPEPQ8N6M6 819 aa9.46□□□□□ -0.9
HDAC6-232ENST00000489053 C18orf8Q96DM3 657 aa9.46□□□□□ -0.9
HDAC6-232ENST00000489053 SIPA1Q96FS4 1042 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms