RNA–Protein interactions for RNA: ENST00000489037.1

BRCA1-218, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 4

Gene BRCA1, Length 455 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-218ENST00000489037 MATKP42679 507 aa14.82□□□□□ -0.04
BRCA1-218ENST00000489037 NOMO3P69849 1222 aa14.82□□□□□ -0.04
BRCA1-218ENST00000489037 NME3Q13232 169 aa14.82□□□□□ -0.04
BRCA1-218ENST00000489037 EIF4HQ15056 248 aaKnown RBP14.82□□□□□ -0.04
BRCA1-218ENST00000489037 ZSCAN23Q3MJ62 389 aa14.82□□□□□ -0.04
BRCA1-218ENST00000489037 USP39Q53GS9 565 aaKnown RBP14.82□□□□□ -0.04
BRCA1-218ENST00000489037 ZC3H12AQ5D1E8 599 aaKnown RBP14.82□□□□□ -0.04
BRCA1-218ENST00000489037 PIK3R6Q5UE93 754 aa14.82□□□□□ -0.04
BRCA1-218ENST00000489037 EGFLAMQ63HQ2 1017 aa14.82□□□□□ -0.04
BRCA1-218ENST00000489037 ANO7Q6IWH7 933 aa14.82□□□□□ -0.04
BRCA1-218ENST00000489037 RFWD3Q6PCD5 774 aa14.82□□□□□ -0.04
BRCA1-218ENST00000489037 ARHGAP30Q7Z6I6 1101 aaPredicted RBP14.82□□□□□ -0.04
BRCA1-218ENST00000489037 WFIKKN2Q8TEU8 576 aa14.82□□□□□ -0.04
BRCA1-218ENST00000489037 SLC20A1Q8WUM9 679 aa14.82□□□□□ -0.04
BRCA1-218ENST00000489037 STIM2Q9P246 746 aa14.82□□□□□ -0.04
BRCA1-218ENST00000489037 NOCTQ9UK39 431 aaKnown RBP14.82□□□□□ -0.04
BRCA1-218ENST00000489037 PAXBP1Q9Y5B6 917 aa14.82□□□□□ -0.04
BRCA1-218ENST00000489037 A0A1W2PQC6 194 aa14.81□□□□□ -0.04
BRCA1-218ENST00000489037 PRRT4C9JH25 899 aa14.81□□□□□ -0.04
BRCA1-218ENST00000489037 F5H5T6 163 aa14.81□□□□□ -0.04
BRCA1-218ENST00000489037 GOLGA8SH3BPF8 625 aa14.81□□□□□ -0.04
BRCA1-218ENST00000489037 M0QYT0 321 aa14.81□□□□□ -0.04
BRCA1-218ENST00000489037 GFRA2O00451 464 aa14.81□□□□□ -0.04
BRCA1-218ENST00000489037 F9P00740 461 aa14.81□□□□□ -0.04
BRCA1-218ENST00000489037 IGLV3-25P01717 112 aa14.81□□□□□ -0.04
BRCA1-218ENST00000489037 CYP1A1P04798 512 aaPredicted RBP14.81□□□□□ -0.04
BRCA1-218ENST00000489037 HNRNPLP14866 589 aaKnown RBP eCLIP14.81□□□□□ -0.04
BRCA1-218ENST00000489037 HOXD9P28356 352 aaPredicted RBP14.81□□□□□ -0.04
BRCA1-218ENST00000489037 WASP42768 502 aa14.81□□□□□ -0.04
BRCA1-218ENST00000489037 NSFP46459 744 aaKnown RBP14.81□□□□□ -0.04
BRCA1-218ENST00000489037 FMO1Q01740 532 aa14.81□□□□□ -0.04
BRCA1-218ENST00000489037 BYSLQ13895 437 aaKnown RBP14.81□□□□□ -0.04
BRCA1-218ENST00000489037 GEN1Q17RS7 908 aa14.81□□□□□ -0.04
BRCA1-218ENST00000489037 FAM133BQ5BKY9 247 aaKnown RBP14.81□□□□□ -0.04
BRCA1-218ENST00000489037 LAIR1Q6GTX8 287 aa14.81□□□□□ -0.04
BRCA1-218ENST00000489037 TMEM92Q6UXU6 159 aa14.81□□□□□ -0.04
BRCA1-218ENST00000489037 LUZP1Q86V48 1076 aa14.81□□□□□ -0.04
BRCA1-218ENST00000489037 C11orf74Q86VG3 221 aa14.81□□□□□ -0.04
BRCA1-218ENST00000489037 CHSY1Q86X52 802 aa14.81□□□□□ -0.04
BRCA1-218ENST00000489037 XYLT1Q86Y38 959 aa14.81□□□□□ -0.04
BRCA1-218ENST00000489037 CIPCQ9C0C6 399 aa14.81□□□□□ -0.04
BRCA1-218ENST00000489037 ZDHHC4Q9NPG8 344 aa14.81□□□□□ -0.04
BRCA1-218ENST00000489037 ELOVL2Q9NXB9 296 aa14.81□□□□□ -0.04
BRCA1-218ENST00000489037 MYO6Q9UM54 1294 aa14.81□□□□□ -0.04
BRCA1-218ENST00000489037 THADAQ6YHU6 1953 aa14.81□□□□□ -0.04
BRCA1-218ENST00000489037 OTOGLQ3ZCN5 2332 aa14.81□□□□□ -0.04
BRCA1-218ENST00000489037 A0A1B0GTH6 734 aa14.8□□□□□ -0.04
BRCA1-218ENST00000489037 TCRBV21S2A2A0A5A6 115 aa14.8□□□□□ -0.04
BRCA1-218ENST00000489037 ANTXRLA6NF34 631 aa14.8□□□□□ -0.04
BRCA1-218ENST00000489037 KCNU1A8MYU2 1149 aa14.8□□□□□ -0.04
BRCA1-218ENST00000489037 TACR2P21452 398 aa14.8□□□□□ -0.04
BRCA1-218ENST00000489037 SLC6A4P31645 630 aa14.8□□□□□ -0.04
BRCA1-218ENST00000489037 SULT1E1P49888 294 aa14.8□□□□□ -0.04
BRCA1-218ENST00000489037 FANCCQ00597 558 aa14.8□□□□□ -0.04
BRCA1-218ENST00000489037 SRSF5Q13243 272 aaKnown RBP14.8□□□□□ -0.04
BRCA1-218ENST00000489037 STARD3Q14849 445 aa14.8□□□□□ -0.04
BRCA1-218ENST00000489037 LPAL2Q16609 132 aa14.8□□□□□ -0.04
BRCA1-218ENST00000489037 MS4A13Q5J8X5 152 aa14.8□□□□□ -0.04
BRCA1-218ENST00000489037 RABGAP1LQ5R372 815 aa14.8□□□□□ -0.04
BRCA1-218ENST00000489037 RAP1GAP2Q684P5 730 aa14.8□□□□□ -0.04
BRCA1-218ENST00000489037 NADSYN1Q6IA69 706 aa14.8□□□□□ -0.04
BRCA1-218ENST00000489037 RASSF3Q86WH2 238 aa14.8□□□□□ -0.04
BRCA1-218ENST00000489037 MFN1Q8IWA4 741 aa14.8□□□□□ -0.04
BRCA1-218ENST00000489037 LGI2Q8N0V4 545 aa14.8□□□□□ -0.04
BRCA1-218ENST00000489037 AHI1Q8N157 1196 aa14.8□□□□□ -0.04
BRCA1-218ENST00000489037 GPR161Q8N6U8 529 aaKnown RBP14.8□□□□□ -0.04
BRCA1-218ENST00000489037 HMGB4Q8WW32 186 aa14.8□□□□□ -0.04
BRCA1-218ENST00000489037 AGPAT1Q99943 283 aa14.8□□□□□ -0.04
BRCA1-218ENST00000489037 TPSD1Q9BZJ3 242 aa14.8□□□□□ -0.04
BRCA1-218ENST00000489037 NUCKS1Q9H1E3 243 aaKnown RBP14.8□□□□□ -0.04
BRCA1-218ENST00000489037 PLA2G4CQ9UP65 541 aa14.8□□□□□ -0.04
BRCA1-218ENST00000489037 ABCA7Q8IZY2 2146 aa14.8□□□□□ -0.04
BRCA1-218ENST00000489037 FAM170AA1A519 330 aa14.79□□□□□ -0.04
BRCA1-218ENST00000489037 H0Y626 953 aa14.79□□□□□ -0.04
BRCA1-218ENST00000489037 SYNCRIPO60506 623 aaKnown RBP14.79□□□□□ -0.04
BRCA1-218ENST00000489037 ADAM23O75077 832 aa14.79□□□□□ -0.04
BRCA1-218ENST00000489037 RHOBTB1O94844 696 aa14.79□□□□□ -0.04
BRCA1-218ENST00000489037 MOCS3O95396 460 aa14.79□□□□□ -0.04
BRCA1-218ENST00000489037 CALB1P05937 261 aa14.79□□□□□ -0.04
BRCA1-218ENST00000489037 ATP5BP06576 529 aaKnown RBP14.79□□□□□ -0.04
BRCA1-218ENST00000489037 PABPC1P11940 636 aaKnown RBP14.79□□□□□ -0.04
BRCA1-218ENST00000489037 CHRNB2P17787 502 aa14.79□□□□□ -0.04
BRCA1-218ENST00000489037 POLR2EP19388 210 aaKnown RBP14.79□□□□□ -0.04
BRCA1-218ENST00000489037 TNFAIP3P21580 790 aa14.79□□□□□ -0.04
BRCA1-218ENST00000489037 MMP8P22894 467 aa14.79□□□□□ -0.04
BRCA1-218ENST00000489037 HOXC13P31276 330 aa14.79□□□□□ -0.04
BRCA1-218ENST00000489037 UBASH3AP57075 661 aa14.79□□□□□ -0.04
BRCA1-218ENST00000489037 PITX1P78337 314 aaPredicted RBP14.79□□□□□ -0.04
BRCA1-218ENST00000489037 DEUP1Q05D60 604 aa14.79□□□□□ -0.04
BRCA1-218ENST00000489037 CDH18Q13634 790 aa14.79□□□□□ -0.04
BRCA1-218ENST00000489037 NR1I3Q14994 352 aa14.79□□□□□ -0.04
BRCA1-218ENST00000489037 ELF2Q15723 593 aa14.79□□□□□ -0.04
BRCA1-218ENST00000489037 BRMS1LQ5PSV4 323 aa14.79□□□□□ -0.04
BRCA1-218ENST00000489037 PPP1R2P3Q6NXS1 205 aa14.79□□□□□ -0.04
BRCA1-218ENST00000489037 MMS22LQ6ZRQ5 1243 aa14.79□□□□□ -0.04
BRCA1-218ENST00000489037 CHST9Q7L1S5 443 aa14.79□□□□□ -0.04
BRCA1-218ENST00000489037 CARNMT1Q8N4J0 409 aa14.79□□□□□ -0.04
BRCA1-218ENST00000489037 SPACA7Q96KW9 195 aa14.79□□□□□ -0.04
BRCA1-218ENST00000489037 NAP1L5Q96NT1 182 aaPredicted RBP14.79□□□□□ -0.04
BRCA1-218ENST00000489037 NPY6RQ99463 290 aa14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms