RNA–Protein interactions for RNA: ENST00000488920.2

CCHCR1-215, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 3

Gene CCHCR1, Length 715 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-215ENST00000488920 GGA2Q9UJY4 613 aa12.41□□□□□ -0.42
CCHCR1-215ENST00000488920 PLA2G4CQ9UP65 541 aa12.41□□□□□ -0.42
CCHCR1-215ENST00000488920 CAPN9O14815 690 aa12.4□□□□□ -0.42
CCHCR1-215ENST00000488920 SART1O43290 800 aaKnown RBP12.4□□□□□ -0.42
CCHCR1-215ENST00000488920 MOCS2O96007 188 aaPredicted RBP12.4□□□□□ -0.42
CCHCR1-215ENST00000488920 PABPC1P11940 636 aaKnown RBP12.4□□□□□ -0.42
CCHCR1-215ENST00000488920 HLA-EP13747 358 aa12.4□□□□□ -0.42
CCHCR1-215ENST00000488920 ENGP17813 658 aa12.4□□□□□ -0.42
CCHCR1-215ENST00000488920 CD6P30203 668 aa12.4□□□□□ -0.42
CCHCR1-215ENST00000488920 CD70P32970 193 aa12.4□□□□□ -0.42
CCHCR1-215ENST00000488920 DPP6P42658 865 aa12.4□□□□□ -0.42
CCHCR1-215ENST00000488920 LMAN2Q12907 356 aa12.4□□□□□ -0.42
CCHCR1-215ENST00000488920 E2F5Q15329 346 aa12.4□□□□□ -0.42
CCHCR1-215ENST00000488920 TAF5Q15542 800 aa12.4□□□□□ -0.42
CCHCR1-215ENST00000488920 DUOXA1Q1HG43 343 aa12.4□□□□□ -0.42
CCHCR1-215ENST00000488920 DPCR1Q3MIW9 517 aa12.4□□□□□ -0.42
CCHCR1-215ENST00000488920 FNDC3BQ53EP0 1204 aaKnown RBP12.4□□□□□ -0.42
CCHCR1-215ENST00000488920 HSP90AA4PQ58FG1 418 aa12.4□□□□□ -0.42
CCHCR1-215ENST00000488920 MPP7Q5T2T1 576 aa12.4□□□□□ -0.42
CCHCR1-215ENST00000488920 PSAPL1Q6NUJ1 521 aa12.4□□□□□ -0.42
CCHCR1-215ENST00000488920 SLC23A3Q6PIS1 610 aa12.4□□□□□ -0.42
CCHCR1-215ENST00000488920 KIAA0907Q7Z7F0 614 aaPredicted RBP12.4□□□□□ -0.42
CCHCR1-215ENST00000488920 TAC4Q86UU9 113 aa12.4□□□□□ -0.42
CCHCR1-215ENST00000488920 CACUL1Q86Y37 369 aa12.4□□□□□ -0.42
CCHCR1-215ENST00000488920 PASD1Q8IV76 773 aa12.4□□□□□ -0.42
CCHCR1-215ENST00000488920 WDTC1Q8N5D0 677 aa12.4□□□□□ -0.42
CCHCR1-215ENST00000488920 ZNF366Q8N895 744 aa12.4□□□□□ -0.42
CCHCR1-215ENST00000488920 WFDC5Q8TCV5 224 aa12.4□□□□□ -0.42
CCHCR1-215ENST00000488920 WFIKKN2Q8TEU8 576 aa12.4□□□□□ -0.42
CCHCR1-215ENST00000488920 SHC3Q92529 594 aa12.4□□□□□ -0.42
CCHCR1-215ENST00000488920 PRCCQ92733 491 aaPredicted RBP12.4□□□□□ -0.42
CCHCR1-215ENST00000488920 AZIN2Q96A70 460 aa12.4□□□□□ -0.42
CCHCR1-215ENST00000488920 SIPA1Q96FS4 1042 aa12.4□□□□□ -0.42
CCHCR1-215ENST00000488920 TOE1Q96GM8 510 aaKnown RBP12.4□□□□□ -0.42
CCHCR1-215ENST00000488920 ZNF419Q96HQ0 510 aaPredicted RBP12.4□□□□□ -0.42
CCHCR1-215ENST00000488920 FAM81BQ96LP2 452 aa12.4□□□□□ -0.42
CCHCR1-215ENST00000488920 CNTNAP3BQ96NU0 1288 aa12.4□□□□□ -0.42
CCHCR1-215ENST00000488920 SERPINB11Q96P15 392 aa12.4□□□□□ -0.42
CCHCR1-215ENST00000488920 CNTNAP3Q9BZ76 1288 aa12.4□□□□□ -0.42
CCHCR1-215ENST00000488920 THAP9Q9H5L6 903 aa12.4□□□□□ -0.42
CCHCR1-215ENST00000488920 SIX2Q9NPC8 291 aa12.4□□□□□ -0.42
CCHCR1-215ENST00000488920 TJP2Q9UDY2 1190 aa12.4□□□□□ -0.42
CCHCR1-215ENST00000488920 DNAJC12Q9UKB3 198 aa12.4□□□□□ -0.42
CCHCR1-215ENST00000488920 AJAP1Q9UKB5 411 aaPredicted RBP12.4□□□□□ -0.42
CCHCR1-215ENST00000488920 TLR6Q9Y2C9 796 aa12.4□□□□□ -0.42
CCHCR1-215ENST00000488920 MYO18AQ92614 2054 aaKnown RBP12.4□□□□□ -0.42
CCHCR1-215ENST00000488920 GTPBP10A4D1E9 387 aaKnown RBP12.39□□□□□ -0.43
CCHCR1-215ENST00000488920 KCNJ18B7U540 433 aa12.39□□□□□ -0.43
CCHCR1-215ENST00000488920 FOXN3O00409 490 aaPredicted RBP12.39□□□□□ -0.43
CCHCR1-215ENST00000488920 GIPC1O14908 333 aa12.39□□□□□ -0.43
CCHCR1-215ENST00000488920 IRAK2O43187 625 aa12.39□□□□□ -0.43
CCHCR1-215ENST00000488920 MAOBP27338 520 aa12.39□□□□□ -0.43
CCHCR1-215ENST00000488920 HOXD12P35452 270 aa12.39□□□□□ -0.43
CCHCR1-215ENST00000488920 NOVA1P51513 510 aaKnown RBP12.39□□□□□ -0.43
CCHCR1-215ENST00000488920 TPMTP51580 245 aa12.39□□□□□ -0.43
CCHCR1-215ENST00000488920 COPAP53621 1224 aa12.39□□□□□ -0.43
CCHCR1-215ENST00000488920 RPS24P62847 133 aaKnown RBP12.39□□□□□ -0.43
CCHCR1-215ENST00000488920 YWHAZP63104 245 aaKnown RBP12.39□□□□□ -0.43
CCHCR1-215ENST00000488920 PDCLQ13371 301 aa12.39□□□□□ -0.43
CCHCR1-215ENST00000488920 MEA1Q16626 185 aa12.39□□□□□ -0.43
CCHCR1-215ENST00000488920 PTPRNQ16849 979 aa12.39□□□□□ -0.43
CCHCR1-215ENST00000488920 ZC3H12AQ5D1E8 599 aaKnown RBP12.39□□□□□ -0.43
CCHCR1-215ENST00000488920 SH3PXD2AQ5TCZ1 1133 aa12.39□□□□□ -0.43
CCHCR1-215ENST00000488920 PEAR1Q5VY43 1037 aaPredicted RBP12.39□□□□□ -0.43
CCHCR1-215ENST00000488920 MBLAC2Q68D91 279 aa12.39□□□□□ -0.43
CCHCR1-215ENST00000488920 BEND5Q7L4P6 421 aa12.39□□□□□ -0.43
CCHCR1-215ENST00000488920 METTL3Q86U44 580 aaKnown RBP12.39□□□□□ -0.43
CCHCR1-215ENST00000488920 RGL4Q8IZJ4 473 aa12.39□□□□□ -0.43
CCHCR1-215ENST00000488920 AHI1Q8N157 1196 aa12.39□□□□□ -0.43
CCHCR1-215ENST00000488920 CFAP52Q8N1V2 620 aa12.39□□□□□ -0.43
CCHCR1-215ENST00000488920 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.39□□□□□ -0.43
CCHCR1-215ENST00000488920 CEP76Q8TAP6 659 aa12.39□□□□□ -0.43
CCHCR1-215ENST00000488920 SLC39A13Q96H72 371 aa12.39□□□□□ -0.43
CCHCR1-215ENST00000488920 PRICKLE1Q96MT3 831 aaPredicted RBP12.39□□□□□ -0.43
CCHCR1-215ENST00000488920 DDX50Q9BQ39 737 aaKnown RBP12.39□□□□□ -0.43
CCHCR1-215ENST00000488920 GTPBP2Q9BX10 602 aaKnown RBP12.39□□□□□ -0.43
CCHCR1-215ENST00000488920 GPR174Q9BXC1 333 aa12.39□□□□□ -0.43
CCHCR1-215ENST00000488920 NUCKS1Q9H1E3 243 aaKnown RBP12.39□□□□□ -0.43
CCHCR1-215ENST00000488920 TMEM245Q9H330 911 aa12.39□□□□□ -0.43
CCHCR1-215ENST00000488920 POPDC2Q9HBU9 364 aa12.39□□□□□ -0.43
CCHCR1-215ENST00000488920 WSB2Q9NYS7 404 aaPredicted RBP12.39□□□□□ -0.43
CCHCR1-215ENST00000488920 USP36Q9P275 1121 aaKnown RBP12.39□□□□□ -0.43
CCHCR1-215ENST00000488920 XPO7Q9UIA9 1087 aaKnown RBP12.39□□□□□ -0.43
CCHCR1-215ENST00000488920 SLC6A14Q9UN76 642 aa12.39□□□□□ -0.43
CCHCR1-215ENST00000488920 THADAQ6YHU6 1953 aa12.39□□□□□ -0.43
CCHCR1-215ENST00000488920 TRUB2O95900 331 aaKnown RBP12.38□□□□□ -0.43
CCHCR1-215ENST00000488920 ATP5BP06576 529 aaKnown RBP12.38□□□□□ -0.43
CCHCR1-215ENST00000488920 SERPINF2P08697 491 aa12.38□□□□□ -0.43
CCHCR1-215ENST00000488920 DLDP09622 509 aaKnown RBP12.38□□□□□ -0.43
CCHCR1-215ENST00000488920 PNMA6AP0CW24 399 aaPredicted RBP12.38□□□□□ -0.43
CCHCR1-215ENST00000488920 ACADMP11310 421 aa12.38□□□□□ -0.43
CCHCR1-215ENST00000488920 PRKCSHP14314 528 aaPredicted RBP12.38□□□□□ -0.43
CCHCR1-215ENST00000488920 POLR2EP19388 210 aaKnown RBP12.38□□□□□ -0.43
CCHCR1-215ENST00000488920 ERCC5P28715 1186 aaPredicted RBP12.38□□□□□ -0.43
CCHCR1-215ENST00000488920 PITX1P78337 314 aaPredicted RBP12.38□□□□□ -0.43
CCHCR1-215ENST00000488920 PTK2Q05397 1052 aa12.38□□□□□ -0.43
CCHCR1-215ENST00000488920 GFPT1Q06210 699 aaPredicted RBP12.38□□□□□ -0.43
CCHCR1-215ENST00000488920 NNTQ13423 1086 aa12.38□□□□□ -0.43
CCHCR1-215ENST00000488920 CAMK2GQ13555 558 aaPredicted RBP12.38□□□□□ -0.43
CCHCR1-215ENST00000488920 MAN2A1Q16706 1144 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms