RNA–Protein interactions for RNA: ENST00000487447.1

CLIP2-207, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 4

Gene CLIP2, Length 564 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-207ENST00000487447 PRICKLE1Q96MT3 831 aaPredicted RBP12.1□□□□□ -0.47
CLIP2-207ENST00000487447 PNKPQ96T60 521 aa12.1□□□□□ -0.47
CLIP2-207ENST00000487447 BBS2Q9BXC9 721 aa12.1□□□□□ -0.47
CLIP2-207ENST00000487447 SLC2A11Q9BYW1 496 aa12.1□□□□□ -0.47
CLIP2-207ENST00000487447 NDRG2Q9UN36 371 aaKnown RBP12.1□□□□□ -0.47
CLIP2-207ENST00000487447 SLC27A6Q9Y2P4 619 aa12.1□□□□□ -0.47
CLIP2-207ENST00000487447 F5P12259 2224 aa12.09□□□□□ -0.47
CLIP2-207ENST00000487447 FAM170AA1A519 330 aa12.09□□□□□ -0.47
CLIP2-207ENST00000487447 CHURC1-FNTBB4DL54 471 aa12.09□□□□□ -0.47
CLIP2-207ENST00000487447 AKR1B15C9JRZ8 316 aaPredicted RBP12.09□□□□□ -0.47
CLIP2-207ENST00000487447 NEDD8-MDP1E9PL57 170 aa12.09□□□□□ -0.47
CLIP2-207ENST00000487447 K7EQS6 105 aa12.09□□□□□ -0.47
CLIP2-207ENST00000487447 PAPSS2O95340 614 aaPredicted RBP12.09□□□□□ -0.47
CLIP2-207ENST00000487447 GJB6O95452 261 aa12.09□□□□□ -0.47
CLIP2-207ENST00000487447 DCNP07585 359 aaKnown RBP12.09□□□□□ -0.47
CLIP2-207ENST00000487447 CISD3P0C7P0 127 aa12.09□□□□□ -0.47
CLIP2-207ENST00000487447 HOXD9P28356 352 aaPredicted RBP12.09□□□□□ -0.47
CLIP2-207ENST00000487447 SDC4P31431 198 aa12.09□□□□□ -0.47
CLIP2-207ENST00000487447 RDXP35241 583 aaKnown RBP12.09□□□□□ -0.47
CLIP2-207ENST00000487447 SLC6A11P48066 632 aa12.09□□□□□ -0.47
CLIP2-207ENST00000487447 RNASE9P60153 205 aaKnown RBP12.09□□□□□ -0.47
CLIP2-207ENST00000487447 DEUP1Q05D60 604 aa12.09□□□□□ -0.47
CLIP2-207ENST00000487447 MESP2Q0VG99 397 aa12.09□□□□□ -0.47
CLIP2-207ENST00000487447 GRSF1Q12849 480 aaKnown RBP eCLIP12.09□□□□□ -0.47
CLIP2-207ENST00000487447 MAMLD1Q13495 774 aa12.09□□□□□ -0.47
CLIP2-207ENST00000487447 GAS6Q14393 721 aa12.09□□□□□ -0.47
CLIP2-207ENST00000487447 SLC18A3Q16572 532 aa12.09□□□□□ -0.47
CLIP2-207ENST00000487447 C5orf22Q49AR2 442 aa12.09□□□□□ -0.47
CLIP2-207ENST00000487447 PREPLQ4J6C6 727 aaPredicted RBP12.09□□□□□ -0.47
CLIP2-207ENST00000487447 MS4A13Q5J8X5 152 aa12.09□□□□□ -0.47
CLIP2-207ENST00000487447 ACBD5Q5T8D3 534 aaPredicted RBP12.09□□□□□ -0.47
CLIP2-207ENST00000487447 KIAA0907Q7Z7F0 614 aaPredicted RBP12.09□□□□□ -0.47
CLIP2-207ENST00000487447 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.09□□□□□ -0.47
CLIP2-207ENST00000487447 ATP6V0D2Q8N8Y2 350 aa12.09□□□□□ -0.47
CLIP2-207ENST00000487447 TERB1Q8NA31 727 aa12.09□□□□□ -0.47
CLIP2-207ENST00000487447 FNIP1Q8TF40 1166 aa12.09□□□□□ -0.47
CLIP2-207ENST00000487447 XPO6Q96QU8 1125 aaKnown RBP12.09□□□□□ -0.47
CLIP2-207ENST00000487447 DDX50Q9BQ39 737 aaKnown RBP12.09□□□□□ -0.47
CLIP2-207ENST00000487447 SELENOOQ9BVL4 669 aa12.09□□□□□ -0.47
CLIP2-207ENST00000487447 LMAN1LQ9HAT1 526 aa12.09□□□□□ -0.47
CLIP2-207ENST00000487447 ANLNQ9NQW6 1124 aa12.09□□□□□ -0.47
CLIP2-207ENST00000487447 PARVAQ9NVD7 372 aa12.09□□□□□ -0.47
CLIP2-207ENST00000487447 XPO7Q9UIA9 1087 aaKnown RBP12.09□□□□□ -0.47
CLIP2-207ENST00000487447 STARD13Q9Y3M8 1113 aa12.09□□□□□ -0.47
CLIP2-207ENST00000487447 PAXBP1Q9Y5B6 917 aa12.09□□□□□ -0.47
CLIP2-207ENST00000487447 DOCK4Q8N1I0 1966 aa12.09□□□□□ -0.47
CLIP2-207ENST00000487447 GOLGA6L7A0A1B0GV03 622 aa12.08□□□□□ -0.48
CLIP2-207ENST00000487447 TMEM191CA6NGB0 347 aa12.08□□□□□ -0.48
CLIP2-207ENST00000487447 TMCO5BA8MYB1 307 aa12.08□□□□□ -0.48
CLIP2-207ENST00000487447 PROB1E7EW31 1015 aa12.08□□□□□ -0.48
CLIP2-207ENST00000487447 KAT7O95251 611 aa12.08□□□□□ -0.48
CLIP2-207ENST00000487447 EGFP01133 1207 aa12.08□□□□□ -0.48
CLIP2-207ENST00000487447 CYBBP04839 570 aa12.08□□□□□ -0.48
CLIP2-207ENST00000487447 PDGFRAP16234 1089 aa12.08□□□□□ -0.48
CLIP2-207ENST00000487447 TACR2P21452 398 aa12.08□□□□□ -0.48
CLIP2-207ENST00000487447 GPD1P21695 349 aa12.08□□□□□ -0.48
CLIP2-207ENST00000487447 EIF4A3P38919 411 aaKnown RBP12.08□□□□□ -0.48
CLIP2-207ENST00000487447 GRIA2P42262 883 aa12.08□□□□□ -0.48
CLIP2-207ENST00000487447 TNFRSF4P43489 277 aa12.08□□□□□ -0.48
CLIP2-207ENST00000487447 SGSHP51688 502 aa12.08□□□□□ -0.48
CLIP2-207ENST00000487447 ZNF143P52747 638 aaPredicted RBP12.08□□□□□ -0.48
CLIP2-207ENST00000487447 ADKP55263 362 aaKnown RBP12.08□□□□□ -0.48
CLIP2-207ENST00000487447 HDAC4P56524 1084 aa12.08□□□□□ -0.48
CLIP2-207ENST00000487447 RPL7AP62424 266 aaKnown RBP12.08□□□□□ -0.48
CLIP2-207ENST00000487447 ANO4Q32M45 955 aa12.08□□□□□ -0.48
CLIP2-207ENST00000487447 ALKBH5Q6P6C2 394 aaKnown RBP12.08□□□□□ -0.48
CLIP2-207ENST00000487447 TPGS1Q6ZTW0 290 aa12.08□□□□□ -0.48
CLIP2-207ENST00000487447 ZNF683Q8IZ20 524 aa12.08□□□□□ -0.48
CLIP2-207ENST00000487447 DTWD2Q8NBA8 298 aa12.08□□□□□ -0.48
CLIP2-207ENST00000487447 HJURPQ8NCD3 748 aaPredicted RBP12.08□□□□□ -0.48
CLIP2-207ENST00000487447 MYEOVQ96EZ4 313 aa12.08□□□□□ -0.48
CLIP2-207ENST00000487447 C1orf74Q96LT6 269 aa12.08□□□□□ -0.48
CLIP2-207ENST00000487447 MCEEQ96PE7 176 aa12.08□□□□□ -0.48
CLIP2-207ENST00000487447 CHP1Q99653 195 aa12.08□□□□□ -0.48
CLIP2-207ENST00000487447 CNPY3Q9BT09 278 aa12.08□□□□□ -0.48
CLIP2-207ENST00000487447 ARHGEF4Q9NR80 690 aa12.08□□□□□ -0.48
CLIP2-207ENST00000487447 ZNHIT6Q9NWK9 470 aaKnown RBP12.08□□□□□ -0.48
CLIP2-207ENST00000487447 DEC1Q9P2X7 70 aa12.08□□□□□ -0.48
CLIP2-207ENST00000487447 CNOT8Q9UFF9 292 aaKnown RBP12.08□□□□□ -0.48
CLIP2-207ENST00000487447 SCINQ9Y6U3 715 aa12.08□□□□□ -0.48
CLIP2-207ENST00000487447 RIF1Q5UIP0 2472 aaKnown RBP12.08□□□□□ -0.48
CLIP2-207ENST00000487447 ANKRD62A6NC57 917 aa12.07□□□□□ -0.48
CLIP2-207ENST00000487447 PRR23AA6NEV1 266 aa12.07□□□□□ -0.48
CLIP2-207ENST00000487447 STK25O00506 426 aa12.07□□□□□ -0.48
CLIP2-207ENST00000487447 CCP110O43303 1012 aa12.07□□□□□ -0.48
CLIP2-207ENST00000487447 PAGE1O75459 146 aa12.07□□□□□ -0.48
CLIP2-207ENST00000487447 ADCY5O95622 1261 aa12.07□□□□□ -0.48
CLIP2-207ENST00000487447 ABCB4P21439 1286 aa12.07□□□□□ -0.48
CLIP2-207ENST00000487447 NBL1P41271 181 aa12.07□□□□□ -0.48
CLIP2-207ENST00000487447 KIR2DL1P43626 348 aaPredicted RBP12.07□□□□□ -0.48
CLIP2-207ENST00000487447 ATXN1P54253 815 aaKnown RBP12.07□□□□□ -0.48
CLIP2-207ENST00000487447 OGDHQ02218 1023 aa12.07□□□□□ -0.48
CLIP2-207ENST00000487447 NRG1Q02297 640 aaPredicted RBP12.07□□□□□ -0.48
CLIP2-207ENST00000487447 ZNF252P-AS1Q0IIN9 211 aa12.07□□□□□ -0.48
CLIP2-207ENST00000487447 SCAPQ12770 1279 aa12.07□□□□□ -0.48
CLIP2-207ENST00000487447 NME3Q13232 169 aa12.07□□□□□ -0.48
CLIP2-207ENST00000487447 C15orf59Q2T9L4 293 aaPredicted RBP12.07□□□□□ -0.48
CLIP2-207ENST00000487447 TTC39BQ5VTQ0 682 aaPredicted RBP12.07□□□□□ -0.48
CLIP2-207ENST00000487447 GRAMD4Q6IC98 578 aa12.07□□□□□ -0.48
CLIP2-207ENST00000487447 RFWD3Q6PCD5 774 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms