RNA–Protein interactions for RNA: ENST00000486100.1

PRPF40A-209, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 4

Gene PRPF40A, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-209ENST00000486100 SNX16P57768 344 aa19.12■□□□□ 0.65
PRPF40A-209ENST00000486100 ARID5AQ03989 594 aa19.12■□□□□ 0.65
PRPF40A-209ENST00000486100 DRAP1Q14919 205 aaPredicted RBP19.12■□□□□ 0.65
PRPF40A-209ENST00000486100 TAF5Q15542 800 aa19.12■□□□□ 0.65
PRPF40A-209ENST00000486100 FUT11Q495W5 492 aa19.12■□□□□ 0.65
PRPF40A-209ENST00000486100 NADSYN1Q6IA69 706 aa19.12■□□□□ 0.65
PRPF40A-209ENST00000486100 TCEAL6Q6IPX3 200 aa19.12■□□□□ 0.65
PRPF40A-209ENST00000486100 TAC4Q86UU9 113 aa19.12■□□□□ 0.65
PRPF40A-209ENST00000486100 SLC47A2Q86VL8 602 aa19.12■□□□□ 0.65
PRPF40A-209ENST00000486100 PASD1Q8IV76 773 aa19.12■□□□□ 0.65
PRPF40A-209ENST00000486100 SORCS1Q8WY21 1168 aa19.12■□□□□ 0.65
PRPF40A-209ENST00000486100 PIGKQ92643 395 aa19.12■□□□□ 0.65
PRPF40A-209ENST00000486100 TCEAL3Q969E4 200 aa19.12■□□□□ 0.65
PRPF40A-209ENST00000486100 ABCB8Q9NUT2 735 aa19.12■□□□□ 0.65
PRPF40A-209ENST00000486100 DNAH14Q0VDD8 3507 aa19.12■□□□□ 0.65
PRPF40A-209ENST00000486100 MYO18AQ92614 2054 aaKnown RBP19.12■□□□□ 0.65
PRPF40A-209ENST00000486100 IGHV1OR15-9A0A0B4J2B8 117 aa19.11■□□□□ 0.65
PRPF40A-209ENST00000486100 MED19A0JLT2 244 aaPredicted RBP19.11■□□□□ 0.65
PRPF40A-209ENST00000486100 KHNYNO15037 678 aaKnown RBP19.11■□□□□ 0.65
PRPF40A-209ENST00000486100 TRUB2O95900 331 aaKnown RBP19.11■□□□□ 0.65
PRPF40A-209ENST00000486100 IGLV3-25P01717 112 aa19.11■□□□□ 0.65
PRPF40A-209ENST00000486100 PNMA6AP0CW24 399 aaPredicted RBP19.11■□□□□ 0.65
PRPF40A-209ENST00000486100 PABPC1P11940 636 aaKnown RBP19.11■□□□□ 0.65
PRPF40A-209ENST00000486100 PTGER3P43115 390 aa19.11■□□□□ 0.65
PRPF40A-209ENST00000486100 RPL6Q02878 288 aaKnown RBP19.11■□□□□ 0.65
PRPF40A-209ENST00000486100 EIF4EBP2Q13542 120 aaPredicted RBP19.11■□□□□ 0.65
PRPF40A-209ENST00000486100 EFHC1Q5JVL4 640 aa19.11■□□□□ 0.65
PRPF40A-209ENST00000486100 STPG1Q5TH74 334 aa19.11■□□□□ 0.65
PRPF40A-209ENST00000486100 CHST9Q7L1S5 443 aa19.11■□□□□ 0.65
PRPF40A-209ENST00000486100 METTL3Q86U44 580 aaKnown RBP19.11■□□□□ 0.65
PRPF40A-209ENST00000486100 ADIPOR2Q86V24 386 aa19.11■□□□□ 0.65
PRPF40A-209ENST00000486100 AHI1Q8N157 1196 aa19.11■□□□□ 0.65
PRPF40A-209ENST00000486100 ZNF557Q8N988 423 aaPredicted RBP19.11■□□□□ 0.65
PRPF40A-209ENST00000486100 SLC6A17Q9H1V8 727 aa19.11■□□□□ 0.65
PRPF40A-209ENST00000486100 ASNSD1Q9NWL6 643 aa19.11■□□□□ 0.65
PRPF40A-209ENST00000486100 GGA2Q9UJY4 613 aa19.11■□□□□ 0.65
PRPF40A-209ENST00000486100 CYP8B1Q9UNU6 501 aa19.11■□□□□ 0.65
PRPF40A-209ENST00000486100 PLA2G4CQ9UP65 541 aa19.11■□□□□ 0.65
PRPF40A-209ENST00000486100 APOEP02649 317 aa19.1■□□□□ 0.65
PRPF40A-209ENST00000486100 DPP6P42658 865 aa19.1■□□□□ 0.65
PRPF40A-209ENST00000486100 CDK17Q00537 523 aa19.1■□□□□ 0.65
PRPF40A-209ENST00000486100 RAPGEF1Q13905 1077 aa19.1■□□□□ 0.65
PRPF40A-209ENST00000486100 DCAF6Q58WW2 860 aa19.1■□□□□ 0.65
PRPF40A-209ENST00000486100 ZC3H12AQ5D1E8 599 aaKnown RBP19.1■□□□□ 0.65
PRPF40A-209ENST00000486100 MS4A13Q5J8X5 152 aa19.1■□□□□ 0.65
PRPF40A-209ENST00000486100 LYSMD4Q5XG99 296 aa19.1■□□□□ 0.65
PRPF40A-209ENST00000486100 IL31Q6EBC2 164 aa19.1■□□□□ 0.65
PRPF40A-209ENST00000486100 KIAA1324Q6UXG2 1013 aaKnown RBP19.1■□□□□ 0.65
PRPF40A-209ENST00000486100 SERPINA13PQ6UXR4 307 aa19.1■□□□□ 0.65
PRPF40A-209ENST00000486100 C11orf57Q6ZUT1 292 aaPredicted RBP19.1■□□□□ 0.65
PRPF40A-209ENST00000486100 ARMCX6Q7L4S7 300 aa19.1■□□□□ 0.65
PRPF40A-209ENST00000486100 SYT12Q8IV01 421 aa19.1■□□□□ 0.65
PRPF40A-209ENST00000486100 DEFB106AQ8N104 65 aa19.1■□□□□ 0.65
PRPF40A-209ENST00000486100 HJURPQ8NCD3 748 aaPredicted RBP19.1■□□□□ 0.65
PRPF40A-209ENST00000486100 C1orf131Q8NDD1 294 aaKnown RBP19.1■□□□□ 0.65
PRPF40A-209ENST00000486100 FIBINQ8TAL6 211 aa19.1■□□□□ 0.65
PRPF40A-209ENST00000486100 DDX1Q92499 740 aaKnown RBP19.1■□□□□ 0.65
PRPF40A-209ENST00000486100 SLC2A13Q96QE2 648 aa19.1■□□□□ 0.65
PRPF40A-209ENST00000486100 NAA15Q9BXJ9 866 aaKnown RBP19.1■□□□□ 0.65
PRPF40A-209ENST00000486100 MKRN2Q9H000 416 aaKnown RBP19.1■□□□□ 0.65
PRPF40A-209ENST00000486100 PRDM16Q9HAZ2 1276 aa19.1■□□□□ 0.65
PRPF40A-209ENST00000486100 SLTMQ9NWH9 1034 aaKnown RBP eCLIP19.1■□□□□ 0.65
PRPF40A-209ENST00000486100 TAB2Q9NYJ8 693 aa19.1■□□□□ 0.65
PRPF40A-209ENST00000486100 STIM2Q9P246 746 aa19.1■□□□□ 0.65
PRPF40A-209ENST00000486100 CEP83Q9Y592 693 aa19.1■□□□□ 0.65
PRPF40A-209ENST00000486100 FHOD1Q9Y613 1164 aa19.1■□□□□ 0.65
PRPF40A-209ENST00000486100 SPAG17Q6Q759 2223 aa19.1■□□□□ 0.65
PRPF40A-209ENST00000486100 ABCA7Q8IZY2 2146 aa19.1■□□□□ 0.65
PRPF40A-209ENST00000486100 TYW5A2RUC4 315 aaKnown RBP19.09■□□□□ 0.65
PRPF40A-209ENST00000486100 TM4SF5O14894 197 aa19.09■□□□□ 0.65
PRPF40A-209ENST00000486100 HSF2BPO75031 334 aa19.09■□□□□ 0.65
PRPF40A-209ENST00000486100 MOCS2O96007 188 aaPredicted RBP19.09■□□□□ 0.65
PRPF40A-209ENST00000486100 ATP5BP06576 529 aaKnown RBP19.09■□□□□ 0.65
PRPF40A-209ENST00000486100 EPHX1P07099 455 aa19.09■□□□□ 0.65
PRPF40A-209ENST00000486100 UCHL3P15374 230 aa19.09■□□□□ 0.65
PRPF40A-209ENST00000486100 PRKCHP24723 683 aa19.09■□□□□ 0.65
PRPF40A-209ENST00000486100 PITX1P78337 314 aaPredicted RBP19.09■□□□□ 0.65
PRPF40A-209ENST00000486100 CDKAL1Q5VV42 579 aa19.09■□□□□ 0.65
PRPF40A-209ENST00000486100 MBLAC2Q68D91 279 aa19.09■□□□□ 0.65
PRPF40A-209ENST00000486100 OR6B2Q6IFH4 312 aa19.09■□□□□ 0.65
PRPF40A-209ENST00000486100 SASS6Q6UVJ0 657 aa19.09■□□□□ 0.65
PRPF40A-209ENST00000486100 TMPRSS6Q8IU80 811 aa19.09■□□□□ 0.65
PRPF40A-209ENST00000486100 MFN1Q8IWA4 741 aa19.09■□□□□ 0.65
PRPF40A-209ENST00000486100 WFDC5Q8TCV5 224 aa19.09■□□□□ 0.65
PRPF40A-209ENST00000486100 MYEOVQ96EZ4 313 aa19.09■□□□□ 0.65
PRPF40A-209ENST00000486100 LMLNQ96KR4 655 aa19.09■□□□□ 0.65
PRPF40A-209ENST00000486100 BTN2A3PQ96KV6 586 aa19.09■□□□□ 0.65
PRPF40A-209ENST00000486100 PRICKLE1Q96MT3 831 aaPredicted RBP19.09■□□□□ 0.65
PRPF40A-209ENST00000486100 LSM14BQ9BX40 385 aaKnown RBP19.09■□□□□ 0.65
PRPF40A-209ENST00000486100 STK33Q9BYT3 514 aa19.09■□□□□ 0.65
PRPF40A-209ENST00000486100 NUCKS1Q9H1E3 243 aaKnown RBP19.09■□□□□ 0.65
PRPF40A-209ENST00000486100 TMEM245Q9H330 911 aa19.09■□□□□ 0.65
PRPF40A-209ENST00000486100 ITM2CQ9NQX7 267 aa19.09■□□□□ 0.65
PRPF40A-209ENST00000486100 TMEM74BQ9NUR3 256 aa19.09■□□□□ 0.65
PRPF40A-209ENST00000486100 SLC12A6Q9UHW9 1150 aa19.09■□□□□ 0.65
PRPF40A-209ENST00000486100 EVLQ9UI08 416 aaPredicted RBP19.09■□□□□ 0.65
PRPF40A-209ENST00000486100 XPO7Q9UIA9 1087 aaKnown RBP19.09■□□□□ 0.65
PRPF40A-209ENST00000486100 CACNA1AO00555 2505 aa19.08■□□□□ 0.65
PRPF40A-209ENST00000486100 PATE3B3GLJ2 98 aa19.08■□□□□ 0.64
PRPF40A-209ENST00000486100 ERBB2P04626 1255 aa19.08■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms