RNA–Protein interactions for RNA: ENST00000485618.1

SF3A1-208, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 593 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-208ENST00000485618 F5P12259 2224 aa8.57□□□□□ -1.04
SF3A1-208ENST00000485618 SPTBN4Q9H254 2564 aa8.57□□□□□ -1.04
SF3A1-208ENST00000485618 KANSL1LA0AUZ9 987 aa8.57□□□□□ -1.04
SF3A1-208ENST00000485618 TMEM191CA6NGB0 347 aa8.57□□□□□ -1.04
SF3A1-208ENST00000485618 SPECC1L-ADORA2AF8WAN1 911 aa8.57□□□□□ -1.04
SF3A1-208ENST00000485618 NRG2O14511 850 aaPredicted RBP8.57□□□□□ -1.04
SF3A1-208ENST00000485618 HOXC11O43248 304 aaPredicted RBP8.57□□□□□ -1.04
SF3A1-208ENST00000485618 MSI1O43347 362 aaKnown RBP8.57□□□□□ -1.04
SF3A1-208ENST00000485618 TIMM44O43615 452 aa8.57□□□□□ -1.04
SF3A1-208ENST00000485618 ATG13O75143 517 aa8.57□□□□□ -1.04
SF3A1-208ENST00000485618 ENDOD1O94919 500 aa8.57□□□□□ -1.04
SF3A1-208ENST00000485618 MOCS2O96007 188 aaPredicted RBP8.57□□□□□ -1.04
SF3A1-208ENST00000485618 IGLV3-25P01717 112 aa8.57□□□□□ -1.04
SF3A1-208ENST00000485618 CYP1A2P05177 515 aa8.57□□□□□ -1.04
SF3A1-208ENST00000485618 PLEKP08567 350 aaPredicted RBP8.57□□□□□ -1.04
SF3A1-208ENST00000485618 DRD1P21728 446 aa8.57□□□□□ -1.04
SF3A1-208ENST00000485618 HTR7P34969 479 aa8.57□□□□□ -1.04
SF3A1-208ENST00000485618 EIF2DP41214 584 aaKnown RBP8.57□□□□□ -1.04
SF3A1-208ENST00000485618 ARHGAP25P42331 645 aa8.57□□□□□ -1.04
SF3A1-208ENST00000485618 NOP2P46087 812 aaKnown RBP8.57□□□□□ -1.04
SF3A1-208ENST00000485618 ZNF135P52742 658 aaPredicted RBP8.57□□□□□ -1.04
SF3A1-208ENST00000485618 STARD6P59095 220 aa8.57□□□□□ -1.04
SF3A1-208ENST00000485618 ASTE1Q2TB18 679 aaPredicted RBP8.57□□□□□ -1.04
SF3A1-208ENST00000485618 FBXO43Q4G163 708 aa8.57□□□□□ -1.04
SF3A1-208ENST00000485618 BOLA3Q53S33 107 aa8.57□□□□□ -1.04
SF3A1-208ENST00000485618 C2CD6Q53TS8 623 aa8.57□□□□□ -1.04
SF3A1-208ENST00000485618 EFHC2Q5JST6 749 aa8.57□□□□□ -1.04
SF3A1-208ENST00000485618 DGKKQ5KSL6 1271 aa8.57□□□□□ -1.04
SF3A1-208ENST00000485618 LY6G5CQ5SRR4 150 aa8.57□□□□□ -1.04
SF3A1-208ENST00000485618 SCYL2Q6P3W7 929 aa8.57□□□□□ -1.04
SF3A1-208ENST00000485618 Q6ZNB5 142 aa8.57□□□□□ -1.04
SF3A1-208ENST00000485618 TPRG1Q6ZUI0 275 aa8.57□□□□□ -1.04
SF3A1-208ENST00000485618 KIAA1328Q86T90 577 aa8.57□□□□□ -1.04
SF3A1-208ENST00000485618 PSTKQ8IV42 348 aaKnown RBP8.57□□□□□ -1.04
SF3A1-208ENST00000485618 HJURPQ8NCD3 748 aaPredicted RBP8.57□□□□□ -1.04
SF3A1-208ENST00000485618 ST13P5Q8NFI4 369 aaPredicted RBP8.57□□□□□ -1.04
SF3A1-208ENST00000485618 KCNV2Q8TDN2 545 aa8.57□□□□□ -1.04
SF3A1-208ENST00000485618 FAM172AQ8WUF8 416 aa8.57□□□□□ -1.04
SF3A1-208ENST00000485618 UBE2Q2Q8WVN8 375 aa8.57□□□□□ -1.04
SF3A1-208ENST00000485618 CENPIQ92674 756 aaPredicted RBP8.57□□□□□ -1.04
SF3A1-208ENST00000485618 RSPRY1Q96DX4 576 aa8.57□□□□□ -1.04
SF3A1-208ENST00000485618 SLC39A13Q96H72 371 aa8.57□□□□□ -1.04
SF3A1-208ENST00000485618 ZFYVE19Q96K21 471 aa8.57□□□□□ -1.04
SF3A1-208ENST00000485618 FCRL2Q96LA5 508 aaPredicted RBP8.57□□□□□ -1.04
SF3A1-208ENST00000485618 CFAP57Q96MR6 1250 aa8.57□□□□□ -1.04
SF3A1-208ENST00000485618 LRRC3BQ96PB8 259 aa8.57□□□□□ -1.04
SF3A1-208ENST00000485618 PNKPQ96T60 521 aa8.57□□□□□ -1.04
SF3A1-208ENST00000485618 P2RY13Q9BPV8 354 aa8.57□□□□□ -1.04
SF3A1-208ENST00000485618 IER2Q9BTL4 223 aa8.57□□□□□ -1.04
SF3A1-208ENST00000485618 NUP85Q9BW27 656 aa8.57□□□□□ -1.04
SF3A1-208ENST00000485618 TKTL2Q9H0I9 626 aa8.57□□□□□ -1.04
SF3A1-208ENST00000485618 THAP2Q9H0W7 228 aa8.57□□□□□ -1.04
SF3A1-208ENST00000485618 LINC00597Q9H2U6 94 aa8.57□□□□□ -1.04
SF3A1-208ENST00000485618 GTSE1Q9NYZ3 720 aa8.57□□□□□ -1.04
SF3A1-208ENST00000485618 MARK1Q9P0L2 795 aa8.57□□□□□ -1.04
SF3A1-208ENST00000485618 SIT1Q9Y3P8 196 aa8.57□□□□□ -1.04
SF3A1-208ENST00000485618 PCDHA13Q9Y5I0 950 aa8.57□□□□□ -1.04
SF3A1-208ENST00000485618 MYO16Q9Y6X6 1858 aa8.57□□□□□ -1.04
SF3A1-208ENST00000485618 KRBA1A5PL33 1030 aa8.56□□□□□ -1.04
SF3A1-208ENST00000485618 FAM170BA6NMN3 283 aa8.56□□□□□ -1.04
SF3A1-208ENST00000485618 NEDD8-MDP1E9PL57 170 aa8.56□□□□□ -1.04
SF3A1-208ENST00000485618 ARNTLO00327 626 aa8.56□□□□□ -1.04
SF3A1-208ENST00000485618 ZBTB24O43167 697 aaPredicted RBP8.56□□□□□ -1.04
SF3A1-208ENST00000485618 PRPSAP2O60256 369 aa8.56□□□□□ -1.04
SF3A1-208ENST00000485618 KRT37O76014 449 aa8.56□□□□□ -1.04
SF3A1-208ENST00000485618 NDUFA10O95299 355 aa8.56□□□□□ -1.04
SF3A1-208ENST00000485618 MOCS3O95396 460 aa8.56□□□□□ -1.04
SF3A1-208ENST00000485618 LCA5LO95447 670 aa8.56□□□□□ -1.04
SF3A1-208ENST00000485618 KLKB1P03952 638 aa8.56□□□□□ -1.04
SF3A1-208ENST00000485618 APODP05090 189 aa8.56□□□□□ -1.04
SF3A1-208ENST00000485618 TYRP14679 529 aa8.56□□□□□ -1.04
SF3A1-208ENST00000485618 ARSAP15289 507 aa8.56□□□□□ -1.04
SF3A1-208ENST00000485618 CTHP32929 405 aa8.56□□□□□ -1.04
SF3A1-208ENST00000485618 GJA4P35212 333 aa8.56□□□□□ -1.04
SF3A1-208ENST00000485618 PCK1P35558 622 aa8.56□□□□□ -1.04
SF3A1-208ENST00000485618 FLT3P36888 993 aa8.56□□□□□ -1.04
SF3A1-208ENST00000485618 GRIA2P42262 883 aa8.56□□□□□ -1.04
SF3A1-208ENST00000485618 SSR1P43307 286 aaKnown RBP8.56□□□□□ -1.04
SF3A1-208ENST00000485618 NAP1L1P55209 391 aaKnown RBP8.56□□□□□ -1.04
SF3A1-208ENST00000485618 ZXDBP98169 803 aa8.56□□□□□ -1.04
SF3A1-208ENST00000485618 TNK2Q07912 1038 aa8.56□□□□□ -1.04
SF3A1-208ENST00000485618 KIF5AQ12840 1032 aa8.56□□□□□ -1.04
SF3A1-208ENST00000485618 CDO1Q16878 200 aa8.56□□□□□ -1.04
SF3A1-208ENST00000485618 CCDC14Q49A88 953 aa8.56□□□□□ -1.04
SF3A1-208ENST00000485618 PPP1R15BQ5SWA1 713 aa8.56□□□□□ -1.04
SF3A1-208ENST00000485618 TRIM68Q6AZZ1 485 aa8.56□□□□□ -1.04
SF3A1-208ENST00000485618 SDE2Q6IQ49 451 aa8.56□□□□□ -1.04
SF3A1-208ENST00000485618 RHBDF2Q6PJF5 856 aa8.56□□□□□ -1.04
SF3A1-208ENST00000485618 POTEHQ6S545 545 aa8.56□□□□□ -1.04
SF3A1-208ENST00000485618 TPGS1Q6ZTW0 290 aa8.56□□□□□ -1.04
SF3A1-208ENST00000485618 SLFN11Q7Z7L1 901 aa8.56□□□□□ -1.04
SF3A1-208ENST00000485618 CHSY1Q86X52 802 aa8.56□□□□□ -1.04
SF3A1-208ENST00000485618 TMEM25Q86YD3 366 aa8.56□□□□□ -1.04
SF3A1-208ENST00000485618 FAM217AQ8IXS0 508 aa8.56□□□□□ -1.04
SF3A1-208ENST00000485618 EMC1Q8N766 993 aa8.56□□□□□ -1.04
SF3A1-208ENST00000485618 ZNF564Q8TBZ8 553 aaPredicted RBP8.56□□□□□ -1.04
SF3A1-208ENST00000485618 UCMAQ8WVF2 138 aa8.56□□□□□ -1.04
SF3A1-208ENST00000485618 CD101Q93033 1021 aa8.56□□□□□ -1.04
SF3A1-208ENST00000485618 PIWIL1Q96J94 861 aaKnown RBP8.56□□□□□ -1.04
SF3A1-208ENST00000485618 TBCBQ99426 244 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms