RNA–Protein interactions for RNA: ENST00000483941.1

SMAD9-204, Transcript of SMAD family member 9, humanhuman

TSL 3

Gene SMAD9, Length 545 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-204ENST00000483941 HCAR3P49019 387 aa14.48□□□□□ -0.09
SMAD9-204ENST00000483941 TERF1P54274 439 aa14.48□□□□□ -0.09
SMAD9-204ENST00000483941 TBX4P57082 545 aa14.48□□□□□ -0.09
SMAD9-204ENST00000483941 RBM10P98175 930 aaKnown RBP14.48□□□□□ -0.09
SMAD9-204ENST00000483941 EFEMP1Q12805 493 aa14.48□□□□□ -0.09
SMAD9-204ENST00000483941 ZNF211Q13398 564 aaPredicted RBP14.48□□□□□ -0.09
SMAD9-204ENST00000483941 SMTNL2Q2TAL5 461 aa14.48□□□□□ -0.09
SMAD9-204ENST00000483941 ARHGAP15Q53QZ3 475 aa14.48□□□□□ -0.09
SMAD9-204ENST00000483941 KCNT1Q5JUK3 1230 aa14.48□□□□□ -0.09
SMAD9-204ENST00000483941 DCAF12L1Q5VU92 463 aa14.48□□□□□ -0.09
SMAD9-204ENST00000483941 PDZD4Q76G19 769 aaPredicted RBP14.48□□□□□ -0.09
SMAD9-204ENST00000483941 BZW1Q7L1Q6 419 aaKnown RBP14.48□□□□□ -0.09
SMAD9-204ENST00000483941 ERMP1Q7Z2K6 904 aa14.48□□□□□ -0.09
SMAD9-204ENST00000483941 ATP6V0D2Q8N8Y2 350 aa14.48□□□□□ -0.09
SMAD9-204ENST00000483941 SPATA4Q8NEY3 305 aa14.48□□□□□ -0.09
SMAD9-204ENST00000483941 VN1R2Q8NFZ6 395 aa14.48□□□□□ -0.09
SMAD9-204ENST00000483941 FAM71BQ8TC56 605 aa14.48□□□□□ -0.09
SMAD9-204ENST00000483941 RNF25Q96BH1 459 aaPredicted RBP14.48□□□□□ -0.09
SMAD9-204ENST00000483941 RIPOR3Q96MK2 946 aa14.48□□□□□ -0.09
SMAD9-204ENST00000483941 EPAS1Q99814 870 aa14.48□□□□□ -0.09
SMAD9-204ENST00000483941 SNRNP25Q9BV90 132 aaKnown RBP14.48□□□□□ -0.09
SMAD9-204ENST00000483941 CALN1Q9BXU9 219 aa14.48□□□□□ -0.09
SMAD9-204ENST00000483941 TKTL2Q9H0I9 626 aa14.48□□□□□ -0.09
SMAD9-204ENST00000483941 OSBPL2Q9H1P3 480 aa14.48□□□□□ -0.09
SMAD9-204ENST00000483941 DHX35Q9H5Z1 703 aaKnown RBP14.48□□□□□ -0.09
SMAD9-204ENST00000483941 WDR6Q9NNW5 1121 aaKnown RBP14.48□□□□□ -0.09
SMAD9-204ENST00000483941 PIGVQ9NUD9 493 aa14.48□□□□□ -0.09
SMAD9-204ENST00000483941 ARHGEF38Q9NXL2 777 aa14.48□□□□□ -0.09
SMAD9-204ENST00000483941 PER2O15055 1255 aa14.47□□□□□ -0.09
SMAD9-204ENST00000483941 TUBBP07437 444 aa14.47□□□□□ -0.09
SMAD9-204ENST00000483941 L1CAMP32004 1257 aa14.47□□□□□ -0.09
SMAD9-204ENST00000483941 NBL1P41271 181 aa14.47□□□□□ -0.09
SMAD9-204ENST00000483941 CDKN2BP42772 138 aa14.47□□□□□ -0.09
SMAD9-204ENST00000483941 HARS2P49590 506 aaKnown RBP14.47□□□□□ -0.09
SMAD9-204ENST00000483941 LMNB2Q03252 620 aa14.47□□□□□ -0.09
SMAD9-204ENST00000483941 EIF4EBP2Q13542 120 aaPredicted RBP14.47□□□□□ -0.09
SMAD9-204ENST00000483941 TAZQ16635 292 aa14.47□□□□□ -0.09
SMAD9-204ENST00000483941 GLE1Q53GS7 698 aaKnown RBP14.47□□□□□ -0.09
SMAD9-204ENST00000483941 DAB2IPQ5VWQ8 1189 aa14.47□□□□□ -0.09
SMAD9-204ENST00000483941 CPNE8Q86YQ8 564 aa14.47□□□□□ -0.09
SMAD9-204ENST00000483941 CCDC26Q8TAB7 109 aa14.47□□□□□ -0.09
SMAD9-204ENST00000483941 ADAM32Q8TC27 787 aa14.47□□□□□ -0.09
SMAD9-204ENST00000483941 RAPGEF5Q92565 580 aa14.47□□□□□ -0.09
SMAD9-204ENST00000483941 UBXN4Q92575 508 aa14.47□□□□□ -0.09
SMAD9-204ENST00000483941 PLD4Q96BZ4 506 aa14.47□□□□□ -0.09
SMAD9-204ENST00000483941 MS4A14Q96JA4 679 aa14.47□□□□□ -0.09
SMAD9-204ENST00000483941 C1orf74Q96LT6 269 aa14.47□□□□□ -0.09
SMAD9-204ENST00000483941 PEBP4Q96S96 227 aa14.47□□□□□ -0.09
SMAD9-204ENST00000483941 DDX50Q9BQ39 737 aaKnown RBP14.47□□□□□ -0.09
SMAD9-204ENST00000483941 PRKD2Q9BZL6 878 aa14.47□□□□□ -0.09
SMAD9-204ENST00000483941 SFXN1Q9H9B4 322 aa14.47□□□□□ -0.09
SMAD9-204ENST00000483941 OSER1Q9NX31 292 aa14.47□□□□□ -0.09
SMAD9-204ENST00000483941 RASAL2Q9UJF2 1139 aa14.47□□□□□ -0.09
SMAD9-204ENST00000483941 HCFC2Q9Y5Z7 792 aa14.47□□□□□ -0.09
SMAD9-204ENST00000483941 hCG_1818297A0A087WSY0 165 aa14.46□□□□□ -0.09
SMAD9-204ENST00000483941 SLC12A8A0AV02 714 aa14.46□□□□□ -0.09
SMAD9-204ENST00000483941 DAPK3O43293 454 aa14.46□□□□□ -0.09
SMAD9-204ENST00000483941 F11P03951 625 aa14.46□□□□□ -0.09
SMAD9-204ENST00000483941 TCF4P15884 667 aa14.46□□□□□ -0.09
SMAD9-204ENST00000483941 TFE3P19532 575 aaPredicted RBP14.46□□□□□ -0.09
SMAD9-204ENST00000483941 SP100P23497 879 aaPredicted RBP14.46□□□□□ -0.09
SMAD9-204ENST00000483941 GABRR2P28476 465 aa14.46□□□□□ -0.09
SMAD9-204ENST00000483941 CHRNA3P32297 505 aa14.46□□□□□ -0.09
SMAD9-204ENST00000483941 SLC11A2P49281 568 aa14.46□□□□□ -0.09
SMAD9-204ENST00000483941 EPHA5P54756 1037 aa14.46□□□□□ -0.09
SMAD9-204ENST00000483941 ATP13A4Q4VNC1 1196 aa14.46□□□□□ -0.09
SMAD9-204ENST00000483941 PPP6R3Q5H9R7 873 aaPredicted RBP14.46□□□□□ -0.09
SMAD9-204ENST00000483941 OTUD1Q5VV17 481 aaPredicted RBP14.46□□□□□ -0.09
SMAD9-204ENST00000483941 MFSD7Q6UXD7 560 aa14.46□□□□□ -0.09
SMAD9-204ENST00000483941 LRRC31Q6UY01 552 aa14.46□□□□□ -0.09
SMAD9-204ENST00000483941 MAATS1Q7Z4T9 603 aa14.46□□□□□ -0.09
SMAD9-204ENST00000483941 AZIN2Q96A70 460 aa14.46□□□□□ -0.09
SMAD9-204ENST00000483941 SLC39A13Q96H72 371 aa14.46□□□□□ -0.09
SMAD9-204ENST00000483941 BTN2A3PQ96KV6 586 aa14.46□□□□□ -0.09
SMAD9-204ENST00000483941 CORO1BQ9BR76 489 aa14.46□□□□□ -0.09
SMAD9-204ENST00000483941 DCLK3Q9C098 648 aa14.46□□□□□ -0.09
SMAD9-204ENST00000483941 RETREG1Q9H6L5 497 aa14.46□□□□□ -0.09
SMAD9-204ENST00000483941 PIDD1Q9HB75 910 aa14.46□□□□□ -0.09
SMAD9-204ENST00000483941 SFMBT1Q9UHJ3 866 aa14.46□□□□□ -0.09
SMAD9-204ENST00000483941 MYO10Q9HD67 2058 aa14.45□□□□□ -0.1
SMAD9-204ENST00000483941 TRAV19A0A0A6YYK7 116 aa14.45□□□□□ -0.1
SMAD9-204ENST00000483941 C3orf70A6NLC5 250 aaPredicted RBP14.45□□□□□ -0.1
SMAD9-204ENST00000483941 KCNU1A8MYU2 1149 aa14.45□□□□□ -0.1
SMAD9-204ENST00000483941 CCL16O15467 120 aa14.45□□□□□ -0.1
SMAD9-204ENST00000483941 PAPLNO95428 1278 aa14.45□□□□□ -0.1
SMAD9-204ENST00000483941 LATS1O95835 1130 aa14.45□□□□□ -0.1
SMAD9-204ENST00000483941 OAS1P00973 400 aaKnown RBP14.45□□□□□ -0.1
SMAD9-204ENST00000483941 EPCAMP16422 314 aa14.45□□□□□ -0.1
SMAD9-204ENST00000483941 HDCP19113 662 aa14.45□□□□□ -0.1
SMAD9-204ENST00000483941 TGM2P21980 687 aa14.45□□□□□ -0.1
SMAD9-204ENST00000483941 NR2C2P49116 596 aa14.45□□□□□ -0.1
SMAD9-204ENST00000483941 ARSEP51690 589 aa14.45□□□□□ -0.1
SMAD9-204ENST00000483941 PITX1P78337 314 aaPredicted RBP14.45□□□□□ -0.1
SMAD9-204ENST00000483941 NRG1Q02297 640 aaPredicted RBP14.45□□□□□ -0.1
SMAD9-204ENST00000483941 DPYSL3Q14195 570 aa14.45□□□□□ -0.1
SMAD9-204ENST00000483941 ZC3H12AQ5D1E8 599 aaKnown RBP14.45□□□□□ -0.1
SMAD9-204ENST00000483941 TXNRD3NBQ6F5E7 133 aa14.45□□□□□ -0.1
SMAD9-204ENST00000483941 TMEM184AQ6ZMB5 413 aa14.45□□□□□ -0.1
SMAD9-204ENST00000483941 BBS12Q6ZW61 710 aa14.45□□□□□ -0.1
SMAD9-204ENST00000483941 CYP4V2Q6ZWL3 525 aaPredicted RBP14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms