RNA–Protein interactions for RNA: ENST00000483763.5

CDC42SE1-204, Transcript of CDC42 small effector 1, humanhuman

TSL 1 (best)

Gene CDC42SE1, Length 2,379 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-204ENST00000483763 SEC24CP53992 1094 aa9.13□□□□□ -0.95
CDC42SE1-204ENST00000483763 ARPP19P56211 112 aa9.13□□□□□ -0.95
CDC42SE1-204ENST00000483763 YWHAGP61981 247 aaKnown RBP eCLIP9.13□□□□□ -0.95
CDC42SE1-204ENST00000483763 SCAPQ12770 1279 aa9.13□□□□□ -0.95
CDC42SE1-204ENST00000483763 CTXN3Q4LDR2 81 aa9.13□□□□□ -0.95
CDC42SE1-204ENST00000483763 EFHC2Q5JST6 749 aa9.13□□□□□ -0.95
CDC42SE1-204ENST00000483763 C4orf50Q6ZRC1 276 aa9.13□□□□□ -0.95
CDC42SE1-204ENST00000483763 CENPUQ71F23 418 aa9.13□□□□□ -0.95
CDC42SE1-204ENST00000483763 IRGQQ8WZA9 623 aa9.13□□□□□ -0.95
CDC42SE1-204ENST00000483763 CASP10Q92851 521 aa9.13□□□□□ -0.95
CDC42SE1-204ENST00000483763 NTAN1Q96AB6 310 aa9.13□□□□□ -0.95
CDC42SE1-204ENST00000483763 ROPN1BQ9BZX4 212 aaPredicted RBP9.13□□□□□ -0.95
CDC42SE1-204ENST00000483763 PRDM12Q9H4Q4 367 aa9.13□□□□□ -0.95
CDC42SE1-204ENST00000483763 C11orf49Q9H6J7 331 aa9.13□□□□□ -0.95
CDC42SE1-204ENST00000483763 ROPN1Q9HAT0 212 aaPredicted RBP9.13□□□□□ -0.95
CDC42SE1-204ENST00000483763 CHD7Q9P2D1 2997 aa9.13□□□□□ -0.95
CDC42SE1-204ENST00000483763 RCOR3Q9P2K3 495 aaPredicted RBP9.13□□□□□ -0.95
CDC42SE1-204ENST00000483763 OR12D3Q9UGF7 316 aa9.13□□□□□ -0.95
CDC42SE1-204ENST00000483763 COL4A4P53420 1690 aaPredicted RBP9.13□□□□□ -0.95
CDC42SE1-204ENST00000483763 MYO18AQ92614 2054 aaKnown RBP9.13□□□□□ -0.95
CDC42SE1-204ENST00000483763 TBKBP1A7MCY6 615 aa9.13□□□□□ -0.95
CDC42SE1-204ENST00000483763 EEF2KO00418 725 aaKnown RBP9.13□□□□□ -0.95
CDC42SE1-204ENST00000483763 TRAPPC3O43617 180 aa9.13□□□□□ -0.95
CDC42SE1-204ENST00000483763 TCEA3O75764 348 aa9.13□□□□□ -0.95
CDC42SE1-204ENST00000483763 LRIG2O94898 1065 aa9.13□□□□□ -0.95
CDC42SE1-204ENST00000483763 CXCL10P02778 98 aa9.13□□□□□ -0.95
CDC42SE1-204ENST00000483763 ZFXP17010 805 aaPredicted RBP9.13□□□□□ -0.95
CDC42SE1-204ENST00000483763 MMP13P45452 471 aa9.13□□□□□ -0.95
CDC42SE1-204ENST00000483763 XRCC4Q13426 336 aa9.13□□□□□ -0.95
CDC42SE1-204ENST00000483763 EFTUD2Q15029 972 aaKnown RBP eCLIP9.13□□□□□ -0.951e-8■■■□□ 19.1
CDC42SE1-204ENST00000483763 BBS9Q3SYG4 887 aa9.13□□□□□ -0.95
CDC42SE1-204ENST00000483763 CAND1Q86VP6 1230 aaKnown RBP9.13□□□□□ -0.95
CDC42SE1-204ENST00000483763 SCML4Q8N228 414 aa9.13□□□□□ -0.95
CDC42SE1-204ENST00000483763 FBXO36Q8NEA4 188 aa9.13□□□□□ -0.95
CDC42SE1-204ENST00000483763 SERPINB12Q96P63 405 aa9.13□□□□□ -0.95
CDC42SE1-204ENST00000483763 QKIQ96PU8 341 aaKnown RBP eCLIP9.13□□□□□ -0.95
CDC42SE1-204ENST00000483763 TRIM56Q9BRZ2 755 aaKnown RBP9.13□□□□□ -0.95
CDC42SE1-204ENST00000483763 KDM4CQ9H3R0 1056 aa9.13□□□□□ -0.95
CDC42SE1-204ENST00000483763 PAK5Q9P286 719 aa9.13□□□□□ -0.95
CDC42SE1-204ENST00000483763 A0A1W2PQH9 124 aa9.12□□□□□ -0.95
CDC42SE1-204ENST00000483763 H3BRJ5 948 aa9.12□□□□□ -0.95
CDC42SE1-204ENST00000483763 KCNK1O00180 336 aa9.12□□□□□ -0.95
CDC42SE1-204ENST00000483763 SYN3O14994 580 aa9.12□□□□□ -0.95
CDC42SE1-204ENST00000483763 ADAM12O43184 909 aa9.12□□□□□ -0.95
CDC42SE1-204ENST00000483763 GCATO75600 419 aa9.12□□□□□ -0.95
CDC42SE1-204ENST00000483763 AGTP01019 485 aa9.12□□□□□ -0.95
CDC42SE1-204ENST00000483763 FGFR3P22607 806 aa9.12□□□□□ -0.95
CDC42SE1-204ENST00000483763 ITGB8P26012 769 aa9.12□□□□□ -0.95
CDC42SE1-204ENST00000483763 ARL4CP56559 192 aa9.12□□□□□ -0.95
CDC42SE1-204ENST00000483763 MPP2Q14168 576 aa9.12□□□□□ -0.95
CDC42SE1-204ENST00000483763 FUT10Q6P4F1 479 aa9.12□□□□□ -0.95
CDC42SE1-204ENST00000483763 C3orf62Q6ZUJ4 267 aa9.12□□□□□ -0.95
CDC42SE1-204ENST00000483763 ZNF534Q76KX8 674 aa9.12□□□□□ -0.95
CDC42SE1-204ENST00000483763 NPAS4Q8IUM7 802 aa9.12□□□□□ -0.95
CDC42SE1-204ENST00000483763 PYROXD1Q8WU10 500 aa9.12□□□□□ -0.95
CDC42SE1-204ENST00000483763 TFB1MQ8WVM0 346 aaKnown RBP9.12□□□□□ -0.95
CDC42SE1-204ENST00000483763 HTR3CQ8WXA8 447 aa9.12□□□□□ -0.95
CDC42SE1-204ENST00000483763 ARHGEF2Q92974 986 aaKnown RBP9.12□□□□□ -0.95
CDC42SE1-204ENST00000483763 MRRFQ96E11 262 aaKnown RBP9.12□□□□□ -0.95
CDC42SE1-204ENST00000483763 P2RY11Q96G91 374 aa9.12□□□□□ -0.95
CDC42SE1-204ENST00000483763 VPS37BQ9H9H4 285 aa9.12□□□□□ -0.95
CDC42SE1-204ENST00000483763 PLAC1Q9HBJ0 212 aa9.12□□□□□ -0.95
CDC42SE1-204ENST00000483763 TMEM39AQ9NV64 488 aa9.12□□□□□ -0.95
CDC42SE1-204ENST00000483763 LRFN2Q9ULH4 789 aa9.12□□□□□ -0.95
CDC42SE1-204ENST00000483763 NEU3Q9UQ49 428 aa9.12□□□□□ -0.95
CDC42SE1-204ENST00000483763 COLQQ9Y215 455 aaPredicted RBP9.12□□□□□ -0.95
CDC42SE1-204ENST00000483763 NUP205Q92621 2012 aa9.12□□□□□ -0.95
CDC42SE1-204ENST00000483763 REV3LO60673 3130 aa9.12□□□□□ -0.95
CDC42SE1-204ENST00000483763 VCANP13611 3396 aa9.12□□□□□ -0.95
CDC42SE1-204ENST00000483763 ARHGEF37A1IGU5 675 aa9.12□□□□□ -0.95
CDC42SE1-204ENST00000483763 CHADO15335 359 aa9.12□□□□□ -0.95
CDC42SE1-204ENST00000483763 IRAK2O43187 625 aa9.12□□□□□ -0.95
CDC42SE1-204ENST00000483763 TBC1D4O60343 1298 aa9.12□□□□□ -0.95
CDC42SE1-204ENST00000483763 TBX18O95935 607 aa9.12□□□□□ -0.95
CDC42SE1-204ENST00000483763 ABHD2P08910 425 aa9.12□□□□□ -0.95
CDC42SE1-204ENST00000483763 ELK3P41970 407 aa9.12□□□□□ -0.95
CDC42SE1-204ENST00000483763 AP1B1Q10567 949 aa9.12□□□□□ -0.95
CDC42SE1-204ENST00000483763 WASHC5Q12768 1159 aa9.12□□□□□ -0.95
CDC42SE1-204ENST00000483763 PAFAH1B3Q15102 231 aaKnown RBP9.12□□□□□ -0.95
CDC42SE1-204ENST00000483763 PRKD1Q15139 912 aaPredicted RBP9.12□□□□□ -0.95
CDC42SE1-204ENST00000483763 ZSCAN26Q16670 478 aa9.12□□□□□ -0.95
CDC42SE1-204ENST00000483763 ANKRD20A2Q5SQ80 823 aa9.12□□□□□ -0.95
CDC42SE1-204ENST00000483763 ANKRD20A1Q5TYW2 823 aa9.12□□□□□ -0.95
CDC42SE1-204ENST00000483763 ANKRD20A3Q5VUR7 823 aa9.12□□□□□ -0.95
CDC42SE1-204ENST00000483763 HEATR6Q6AI08 1181 aaKnown RBP9.12□□□□□ -0.95
CDC42SE1-204ENST00000483763 PRSS55Q6UWB4 352 aaPredicted RBP9.12□□□□□ -0.95
CDC42SE1-204ENST00000483763 CHRDL2Q6WN34 429 aa9.12□□□□□ -0.95
CDC42SE1-204ENST00000483763 RNF19BQ6ZMZ0 732 aa9.12□□□□□ -0.95
CDC42SE1-204ENST00000483763 PDIK1LQ8N165 341 aa9.12□□□□□ -0.95
CDC42SE1-204ENST00000483763 CCNYQ8ND76 341 aa9.12□□□□□ -0.95
CDC42SE1-204ENST00000483763 DEPDC1BQ8WUY9 529 aa9.12□□□□□ -0.95
CDC42SE1-204ENST00000483763 MAML1Q92585 1016 aa9.12□□□□□ -0.95
CDC42SE1-204ENST00000483763 TOX2Q96NM4 488 aa9.12□□□□□ -0.95
CDC42SE1-204ENST00000483763 VN1R3Q9BXE9 311 aa9.12□□□□□ -0.95
CDC42SE1-204ENST00000483763 FAM117AQ9C073 453 aa9.12□□□□□ -0.95
CDC42SE1-204ENST00000483763 SIK2Q9H0K1 926 aa9.12□□□□□ -0.95
CDC42SE1-204ENST00000483763 PRDM5Q9NQX1 630 aaPredicted RBP9.12□□□□□ -0.95
CDC42SE1-204ENST00000483763 RABGEF1Q9UJ41 708 aa9.12□□□□□ -0.95
CDC42SE1-204ENST00000483763 CHMP2BQ9UQN3 213 aa9.12□□□□□ -0.95
CDC42SE1-204ENST00000483763 TEX264Q9Y6I9 313 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms