RNA–Protein interactions for RNA: ENST00000482217.1

VPS41-212, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 951 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-212ENST00000482217 CCDC43Q96MW1 224 aaKnown RBP4.4□□□□□ -1.71
VPS41-212ENST00000482217 CPPED1Q9BRF8 314 aaPredicted RBP4.4□□□□□ -1.71
VPS41-212ENST00000482217 KRTAP17-1Q9BYP8 105 aa4.4□□□□□ -1.71
VPS41-212ENST00000482217 GPR63Q9BZJ6 419 aa4.4□□□□□ -1.71
VPS41-212ENST00000482217 MMADHCQ9H3L0 296 aaPredicted RBP4.4□□□□□ -1.71
VPS41-212ENST00000482217 NCOR1P1Q9H4R4 102 aa4.4□□□□□ -1.71
VPS41-212ENST00000482217 OPA3Q9H6K4 179 aa4.4□□□□□ -1.71
VPS41-212ENST00000482217 ARMT1Q9H993 441 aa4.4□□□□□ -1.71
VPS41-212ENST00000482217 CRLF2Q9HC73 371 aa4.4□□□□□ -1.71
VPS41-212ENST00000482217 EXOC1Q9NV70 894 aa4.4□□□□□ -1.71
VPS41-212ENST00000482217 PSD3Q9NYI0 1048 aa4.4□□□□□ -1.71
VPS41-212ENST00000482217 ACTR3BQ9P1U1 418 aa4.4□□□□□ -1.71
VPS41-212ENST00000482217 TBC1D14Q9P2M4 693 aa4.4□□□□□ -1.71
VPS41-212ENST00000482217 SLC23A1Q9UHI7 598 aa4.4□□□□□ -1.71
VPS41-212ENST00000482217 CPSF3Q9UKF6 684 aaKnown RBP4.4□□□□□ -1.71
VPS41-212ENST00000482217 RUVBL1Q9Y265 456 aaKnown RBP4.4□□□□□ -1.71
VPS41-212ENST00000482217 MYRFQ9Y2G1 1151 aa4.4□□□□□ -1.71
VPS41-212ENST00000482217 SESN1Q9Y6P5 492 aa4.4□□□□□ -1.71
VPS41-212ENST00000482217 F2RL2O00254 374 aa4.39□□□□□ -1.71
VPS41-212ENST00000482217 KIAA0355O15063 1070 aa4.39□□□□□ -1.71
VPS41-212ENST00000482217 GRM6O15303 877 aa4.39□□□□□ -1.71
VPS41-212ENST00000482217 POMCP01189 267 aa4.39□□□□□ -1.71
VPS41-212ENST00000482217 IFNB1P01574 187 aa4.39□□□□□ -1.71
VPS41-212ENST00000482217 HMOX1P09601 288 aa4.39□□□□□ -1.71
VPS41-212ENST00000482217 LAG3P18627 525 aa4.39□□□□□ -1.71
VPS41-212ENST00000482217 COMTP21964 271 aa4.39□□□□□ -1.71
VPS41-212ENST00000482217 MGAT1P26572 445 aa4.39□□□□□ -1.71
VPS41-212ENST00000482217 PRDX5P30044 214 aa4.39□□□□□ -1.71
VPS41-212ENST00000482217 RFC1P35251 1148 aaPredicted RBP4.39□□□□□ -1.71
VPS41-212ENST00000482217 CPA2P48052 419 aa4.39□□□□□ -1.71
VPS41-212ENST00000482217 IFNAR2P48551 515 aa4.39□□□□□ -1.71
VPS41-212ENST00000482217 ZNF41P51814 821 aaPredicted RBP4.39□□□□□ -1.71
VPS41-212ENST00000482217 RAD23AP54725 363 aa4.39□□□□□ -1.71
VPS41-212ENST00000482217 VAMP2P63027 116 aa4.39□□□□□ -1.71
VPS41-212ENST00000482217 RBM6P78332 1123 aaKnown RBP4.39□□□□□ -1.71
VPS41-212ENST00000482217 ADAM17P78536 824 aa4.39□□□□□ -1.71
VPS41-212ENST00000482217 HTRA4P83105 476 aaPredicted RBP4.39□□□□□ -1.71
VPS41-212ENST00000482217 HTD2P86397 168 aa4.39□□□□□ -1.71
VPS41-212ENST00000482217 FMO1Q01740 532 aa4.39□□□□□ -1.71
VPS41-212ENST00000482217 CHRNDQ07001 517 aa4.39□□□□□ -1.71
VPS41-212ENST00000482217 CUL2Q13617 745 aa4.39□□□□□ -1.71
VPS41-212ENST00000482217 SLC12A1Q13621 1099 aa4.39□□□□□ -1.71
VPS41-212ENST00000482217 BMPR2Q13873 1038 aa4.39□□□□□ -1.71
VPS41-212ENST00000482217 TBCEQ15813 527 aaPredicted RBP4.39□□□□□ -1.71
VPS41-212ENST00000482217 GEN1Q17RS7 908 aa4.39□□□□□ -1.71
VPS41-212ENST00000482217 DUSP28Q4G0W2 176 aa4.39□□□□□ -1.71
VPS41-212ENST00000482217 BOLA3Q53S33 107 aa4.39□□□□□ -1.71
VPS41-212ENST00000482217 ZNF805Q5CZA5 627 aa4.39□□□□□ -1.71
VPS41-212ENST00000482217 SPDYCQ5MJ68 293 aa4.39□□□□□ -1.71
VPS41-212ENST00000482217 ATXN7L2Q5T6C5 722 aaPredicted RBP4.39□□□□□ -1.71
VPS41-212ENST00000482217 LRCH2Q5VUJ6 765 aa4.39□□□□□ -1.71
VPS41-212ENST00000482217 ANKS6Q68DC2 871 aa4.39□□□□□ -1.71
VPS41-212ENST00000482217 EFCAB12Q6NXP0 572 aa4.39□□□□□ -1.71
VPS41-212ENST00000482217 C11orf88Q6PI97 169 aa4.39□□□□□ -1.71
VPS41-212ENST00000482217 GBP6Q6ZN66 633 aa4.39□□□□□ -1.71
VPS41-212ENST00000482217 LIMS2Q7Z4I7 341 aa4.39□□□□□ -1.71
VPS41-212ENST00000482217 PXKQ7Z7A4 578 aa4.39□□□□□ -1.71
VPS41-212ENST00000482217 ADGRG6Q86SQ4 1221 aa4.39□□□□□ -1.71
VPS41-212ENST00000482217 ADGRA1Q86SQ6 560 aa4.39□□□□□ -1.71
VPS41-212ENST00000482217 XYLT1Q86Y38 959 aa4.39□□□□□ -1.71
VPS41-212ENST00000482217 FAM90A1Q86YD7 464 aa4.39□□□□□ -1.71
VPS41-212ENST00000482217 THNSL1Q8IYQ7 743 aa4.39□□□□□ -1.71
VPS41-212ENST00000482217 MYOCDQ8IZQ8 938 aa4.39□□□□□ -1.71
VPS41-212ENST00000482217 SCML4Q8N228 414 aa4.39□□□□□ -1.71
VPS41-212ENST00000482217 TXLNBQ8N3L3 684 aa4.39□□□□□ -1.71
VPS41-212ENST00000482217 PDCL2Q8N4E4 241 aa4.39□□□□□ -1.71
VPS41-212ENST00000482217 TTC39CQ8N584 583 aa4.39□□□□□ -1.71
VPS41-212ENST00000482217 DNERQ8NFT8 737 aa4.39□□□□□ -1.71
VPS41-212ENST00000482217 OR52N2Q8NGI0 321 aa4.39□□□□□ -1.71
VPS41-212ENST00000482217 IL31RAQ8NI17 732 aa4.39□□□□□ -1.71
VPS41-212ENST00000482217 ETNPPLQ8TBG4 499 aa4.39□□□□□ -1.71
VPS41-212ENST00000482217 BRIX1Q8TDN6 353 aaKnown RBP4.39□□□□□ -1.71
VPS41-212ENST00000482217 GRK7Q8WTQ7 553 aa4.39□□□□□ -1.71
VPS41-212ENST00000482217 AFG1LQ8WV93 481 aa4.39□□□□□ -1.71
VPS41-212ENST00000482217 HSPH1Q92598 858 aa4.39□□□□□ -1.71
VPS41-212ENST00000482217 TFAP2CQ92754 450 aa4.39□□□□□ -1.71
VPS41-212ENST00000482217 FAM120BQ96EK7 910 aaKnown RBP4.39□□□□□ -1.71
VPS41-212ENST00000482217 FAM89AQ96GI7 184 aa4.39□□□□□ -1.71
VPS41-212ENST00000482217 VPS50Q96JG6 964 aa4.39□□□□□ -1.71
VPS41-212ENST00000482217 LENG8Q96PV6 779 aaPredicted RBP4.39□□□□□ -1.71
VPS41-212ENST00000482217 GPR20Q99678 358 aa4.39□□□□□ -1.71
VPS41-212ENST00000482217 NDC1Q9BTX1 674 aa4.39□□□□□ -1.71
VPS41-212ENST00000482217 COLEC11Q9BWP8 271 aa4.39□□□□□ -1.71
VPS41-212ENST00000482217 B3GNT4Q9C0J1 378 aa4.39□□□□□ -1.71
VPS41-212ENST00000482217 NACA2Q9H009 215 aa4.39□□□□□ -1.71
VPS41-212ENST00000482217 C1orf21Q9H246 121 aa4.39□□□□□ -1.71
VPS41-212ENST00000482217 RNPEPQ9H4A4 650 aa4.39□□□□□ -1.71
VPS41-212ENST00000482217 ST6GALNAC4Q9H4F1 302 aa4.39□□□□□ -1.71
VPS41-212ENST00000482217 MROH8Q9H579 483 aa4.39□□□□□ -1.71
VPS41-212ENST00000482217 BRF2Q9HAW0 419 aa4.39□□□□□ -1.71
VPS41-212ENST00000482217 PNPLA8Q9NP80 782 aa4.39□□□□□ -1.71
VPS41-212ENST00000482217 SARS2Q9NP81 518 aaKnown RBP4.39□□□□□ -1.71
VPS41-212ENST00000482217 CD93Q9NPY3 652 aa4.39□□□□□ -1.71
VPS41-212ENST00000482217 HPS4Q9NQG7 708 aa4.39□□□□□ -1.71
VPS41-212ENST00000482217 EIF2B3Q9NR50 452 aaKnown RBP4.39□□□□□ -1.71
VPS41-212ENST00000482217 SNX15Q9NRS6 342 aa4.39□□□□□ -1.71
VPS41-212ENST00000482217 RLIMQ9NVW2 624 aa4.39□□□□□ -1.71
VPS41-212ENST00000482217 TAS2R3Q9NYW6 316 aa4.39□□□□□ -1.71
VPS41-212ENST00000482217 UBAP1Q9NZ09 502 aa4.39□□□□□ -1.71
VPS41-212ENST00000482217 NINJ2Q9NZG7 142 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms