RNA–Protein interactions for RNA: ENST00000481690.2

GPCPD1-206, Transcript of glycerophosphocholine phosphodiesterase 1, humanhuman

TSL 3

Gene GPCPD1, Length 819 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPCPD1-206ENST00000481690 ZNF606Q8WXB4 792 aa23.1■■□□□ 1.29
GPCPD1-206ENST00000481690 SERPINB11Q96P15 392 aa23.1■■□□□ 1.29
GPCPD1-206ENST00000481690 MED15Q96RN5 788 aa23.1■■□□□ 1.29
GPCPD1-206ENST00000481690 STIM2Q9P246 746 aa23.1■■□□□ 1.29
GPCPD1-206ENST00000481690 GGA2Q9UJY4 613 aa23.1■■□□□ 1.29
GPCPD1-206ENST00000481690 NAALADL1Q9UQQ1 740 aa23.1■■□□□ 1.29
GPCPD1-206ENST00000481690 LAMA1P25391 3075 aa23.1■■□□□ 1.29
GPCPD1-206ENST00000481690 ASCC3Q8N3C0 2202 aaKnown RBP23.09■■□□□ 1.29
GPCPD1-206ENST00000481690 CAPN9O14815 690 aa23.09■■□□□ 1.29
GPCPD1-206ENST00000481690 FYNP06241 537 aa23.09■■□□□ 1.29
GPCPD1-206ENST00000481690 PABPC1P11940 636 aaKnown RBP23.09■■□□□ 1.29
GPCPD1-206ENST00000481690 HLA-EP13747 358 aa23.09■■□□□ 1.29
GPCPD1-206ENST00000481690 CD6P30203 668 aa23.09■■□□□ 1.29
GPCPD1-206ENST00000481690 SLC6A4P31645 630 aa23.09■■□□□ 1.29
GPCPD1-206ENST00000481690 APBA1Q02410 837 aa23.09■■□□□ 1.29
GPCPD1-206ENST00000481690 RING1Q06587 406 aa23.09■■□□□ 1.29
GPCPD1-206ENST00000481690 FAM133BQ5BKY9 247 aaKnown RBP23.09■■□□□ 1.29
GPCPD1-206ENST00000481690 PIK3R6Q5UE93 754 aa23.09■■□□□ 1.29
GPCPD1-206ENST00000481690 AHI1Q8N157 1196 aa23.09■■□□□ 1.29
GPCPD1-206ENST00000481690 MLKLQ8NB16 471 aa23.09■■□□□ 1.29
GPCPD1-206ENST00000481690 CEP76Q8TAP6 659 aa23.09■■□□□ 1.29
GPCPD1-206ENST00000481690 PRCCQ92733 491 aaPredicted RBP23.09■■□□□ 1.29
GPCPD1-206ENST00000481690 SIPA1Q96FS4 1042 aa23.09■■□□□ 1.29
GPCPD1-206ENST00000481690 FCRL2Q96LA5 508 aaPredicted RBP23.09■■□□□ 1.29
GPCPD1-206ENST00000481690 FAM81BQ96LP2 452 aa23.09■■□□□ 1.29
GPCPD1-206ENST00000481690 GTPBP2Q9BX10 602 aaKnown RBP23.09■■□□□ 1.29
GPCPD1-206ENST00000481690 E5RJQ4 531 aa23.08■■□□□ 1.29
GPCPD1-206ENST00000481690 IRAK2O43187 625 aa23.08■■□□□ 1.29
GPCPD1-206ENST00000481690 MOCS2O96007 188 aaPredicted RBP23.08■■□□□ 1.29
GPCPD1-206ENST00000481690 RPL34P49207 117 aaKnown RBP23.08■■□□□ 1.29
GPCPD1-206ENST00000481690 ATXN3P54252 364 aaPredicted RBP23.08■■□□□ 1.29
GPCPD1-206ENST00000481690 EXOC3L4Q17RC7 722 aa23.08■■□□□ 1.29
GPCPD1-206ENST00000481690 SH3PXD2AQ5TCZ1 1133 aa23.08■■□□□ 1.29
GPCPD1-206ENST00000481690 RABEPKQ7Z6M1 372 aa23.08■■□□□ 1.29
GPCPD1-206ENST00000481690 TAC4Q86UU9 113 aa23.08■■□□□ 1.29
GPCPD1-206ENST00000481690 WFDC5Q8TCV5 224 aa23.08■■□□□ 1.29
GPCPD1-206ENST00000481690 TOE1Q96GM8 510 aaKnown RBP23.08■■□□□ 1.29
GPCPD1-206ENST00000481690 TRIM62Q9BVG3 475 aa23.08■■□□□ 1.29
GPCPD1-206ENST00000481690 CLSTN2Q9H4D0 955 aa23.08■■□□□ 1.29
GPCPD1-206ENST00000481690 USP36Q9P275 1121 aaKnown RBP23.08■■□□□ 1.29
GPCPD1-206ENST00000481690 APEX2Q9UBZ4 518 aa23.08■■□□□ 1.29
GPCPD1-206ENST00000481690 CYTH4Q9UIA0 394 aa23.08■■□□□ 1.29
GPCPD1-206ENST00000481690 SLC6A14Q9UN76 642 aa23.08■■□□□ 1.29
GPCPD1-206ENST00000481690 PLA2G4CQ9UP65 541 aa23.08■■□□□ 1.29
GPCPD1-206ENST00000481690 TLR6Q9Y2C9 796 aa23.08■■□□□ 1.29
GPCPD1-206ENST00000481690 PCDH15Q96QU1 1955 aa23.08■■□□□ 1.29
GPCPD1-206ENST00000481690 TYW5A2RUC4 315 aaKnown RBP23.07■■□□□ 1.28
GPCPD1-206ENST00000481690 BECN2A8MW95 431 aa23.07■■□□□ 1.28
GPCPD1-206ENST00000481690 MEI4A8MW99 385 aa23.07■■□□□ 1.28
GPCPD1-206ENST00000481690 GIPC1O14908 333 aa23.07■■□□□ 1.28
GPCPD1-206ENST00000481690 ACADMP11310 421 aa23.07■■□□□ 1.28
GPCPD1-206ENST00000481690 GFPT1Q06210 699 aaPredicted RBP23.07■■□□□ 1.28
GPCPD1-206ENST00000481690 MEA1Q16626 185 aa23.07■■□□□ 1.28
GPCPD1-206ENST00000481690 SYCP2LQ5T4T6 812 aa23.07■■□□□ 1.28
GPCPD1-206ENST00000481690 MBLAC2Q68D91 279 aa23.07■■□□□ 1.28
GPCPD1-206ENST00000481690 NADSYN1Q6IA69 706 aa23.07■■□□□ 1.28
GPCPD1-206ENST00000481690 ADIPOR2Q86V24 386 aa23.07■■□□□ 1.28
GPCPD1-206ENST00000481690 IRF2BP1Q8IU81 584 aa23.07■■□□□ 1.28
GPCPD1-206ENST00000481690 MFN1Q8IWA4 741 aa23.07■■□□□ 1.28
GPCPD1-206ENST00000481690 ZNF366Q8N895 744 aa23.07■■□□□ 1.28
GPCPD1-206ENST00000481690 DDX51Q8N8A6 666 aaKnown RBP eCLIP23.07■■□□□ 1.281e-6■□□□□ 9.4
GPCPD1-206ENST00000481690 HJURPQ8NCD3 748 aaPredicted RBP23.07■■□□□ 1.28
GPCPD1-206ENST00000481690 STK32AQ8WU08 396 aa23.07■■□□□ 1.28
GPCPD1-206ENST00000481690 FOXJ1Q92949 421 aa23.07■■□□□ 1.28
GPCPD1-206ENST00000481690 PRICKLE1Q96MT3 831 aaPredicted RBP23.07■■□□□ 1.28
GPCPD1-206ENST00000481690 DDX50Q9BQ39 737 aaKnown RBP23.07■■□□□ 1.28
GPCPD1-206ENST00000481690 SLC4A5Q9BY07 1137 aa23.07■■□□□ 1.28
GPCPD1-206ENST00000481690 TPRP12270 2363 aaKnown RBP23.06■■□□□ 1.28
GPCPD1-206ENST00000481690 PAPSS1O43252 624 aaPredicted RBP23.06■■□□□ 1.28
GPCPD1-206ENST00000481690 SERPINF2P08697 491 aa23.06■■□□□ 1.28
GPCPD1-206ENST00000481690 CD70P32970 193 aa23.06■■□□□ 1.28
GPCPD1-206ENST00000481690 TPMTP51580 245 aa23.06■■□□□ 1.28
GPCPD1-206ENST00000481690 COPAP53621 1224 aa23.06■■□□□ 1.28
GPCPD1-206ENST00000481690 PDCLQ13371 301 aa23.06■■□□□ 1.28
GPCPD1-206ENST00000481690 MPP7Q5T2T1 576 aa23.06■■□□□ 1.28
GPCPD1-206ENST00000481690 SYPL2Q5VXT5 272 aa23.06■■□□□ 1.28
GPCPD1-206ENST00000481690 METTL3Q86U44 580 aaKnown RBP23.06■■□□□ 1.28
GPCPD1-206ENST00000481690 AZIN2Q96A70 460 aa23.06■■□□□ 1.28
GPCPD1-206ENST00000481690 ZNF419Q96HQ0 510 aaPredicted RBP23.06■■□□□ 1.28
GPCPD1-206ENST00000481690 GPR174Q9BXC1 333 aa23.06■■□□□ 1.28
GPCPD1-206ENST00000481690 ITM2CQ9NQX7 267 aa23.06■■□□□ 1.28
GPCPD1-206ENST00000481690 WSB2Q9NYS7 404 aaPredicted RBP23.06■■□□□ 1.28
GPCPD1-206ENST00000481690 KCNJ18B7U540 433 aa23.05■■□□□ 1.28
GPCPD1-206ENST00000481690 APOEP02649 317 aa23.05■■□□□ 1.28
GPCPD1-206ENST00000481690 ATP5BP06576 529 aaKnown RBP23.05■■□□□ 1.28
GPCPD1-206ENST00000481690 POLR2EP19388 210 aaKnown RBP23.05■■□□□ 1.28
GPCPD1-206ENST00000481690 PON1P27169 355 aa23.05■■□□□ 1.28
GPCPD1-206ENST00000481690 MAOBP27338 520 aa23.05■■□□□ 1.28
GPCPD1-206ENST00000481690 PMLP29590 882 aa23.05■■□□□ 1.28
GPCPD1-206ENST00000481690 NNTQ13423 1086 aa23.05■■□□□ 1.28
GPCPD1-206ENST00000481690 PASD1Q8IV76 773 aa23.05■■□□□ 1.28
GPCPD1-206ENST00000481690 CARNMT1Q8N4J0 409 aa23.05■■□□□ 1.28
GPCPD1-206ENST00000481690 OR2T3Q8NH03 318 aa23.05■■□□□ 1.28
GPCPD1-206ENST00000481690 IRX2Q9BZI1 471 aaPredicted RBP23.05■■□□□ 1.28
GPCPD1-206ENST00000481690 NUCKS1Q9H1E3 243 aaKnown RBP23.05■■□□□ 1.28
GPCPD1-206ENST00000481690 POPDC2Q9HBU9 364 aa23.05■■□□□ 1.28
GPCPD1-206ENST00000481690 CAPN10Q9HC96 672 aa23.05■■□□□ 1.28
GPCPD1-206ENST00000481690 TJP2Q9UDY2 1190 aa23.05■■□□□ 1.28
GPCPD1-206ENST00000481690 ANGPTL2Q9UKU9 493 aa23.05■■□□□ 1.28
GPCPD1-206ENST00000481690 GTPBP10A4D1E9 387 aaKnown RBP23.04■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms