RNA–Protein interactions for RNA: ENST00000480835.1

SNRNP200-205, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 2

Gene SNRNP200, Length 540 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-205ENST00000480835 KCNJ1P48048 391 aa15.3■□□□□ 0.04
SNRNP200-205ENST00000480835 DRG2P55039 364 aaKnown RBP15.3■□□□□ 0.04
SNRNP200-205ENST00000480835 EIF3EP60228 445 aaKnown RBP15.3■□□□□ 0.04
SNRNP200-205ENST00000480835 GUCY2DQ02846 1103 aa15.3■□□□□ 0.04
SNRNP200-205ENST00000480835 XRCC4Q13426 336 aa15.3■□□□□ 0.04
SNRNP200-205ENST00000480835 PAFAH1B3Q15102 231 aaKnown RBP15.3■□□□□ 0.04
SNRNP200-205ENST00000480835 MIB1Q86YT6 1006 aa15.3■□□□□ 0.04
SNRNP200-205ENST00000480835 LEMD2Q8NC56 503 aa15.3■□□□□ 0.04
SNRNP200-205ENST00000480835 CCHCR1Q8TD31 782 aa15.3■□□□□ 0.04
SNRNP200-205ENST00000480835 SEC14L1Q92503 715 aa15.3■□□□□ 0.04
SNRNP200-205ENST00000480835 MRPS31Q92665 395 aaKnown RBP15.3■□□□□ 0.04
SNRNP200-205ENST00000480835 PLD4Q96BZ4 506 aa15.3■□□□□ 0.04
SNRNP200-205ENST00000480835 CCDC114Q96M63 670 aa15.3■□□□□ 0.04
SNRNP200-205ENST00000480835 GCNAQ96QF7 691 aa15.3■□□□□ 0.04
SNRNP200-205ENST00000480835 ERP44Q9BS26 406 aa15.3■□□□□ 0.04
SNRNP200-205ENST00000480835 LRRC3Q9BY71 257 aa15.3■□□□□ 0.04
SNRNP200-205ENST00000480835 MAGEB5Q9BZ81 275 aa15.3■□□□□ 0.04
SNRNP200-205ENST00000480835 SLC28A3Q9HAS3 691 aa15.3■□□□□ 0.04
SNRNP200-205ENST00000480835 EPB41L5Q9HCM4 733 aa15.3■□□□□ 0.04
SNRNP200-205ENST00000480835 MAN1C1Q9NR34 630 aa15.3■□□□□ 0.04
SNRNP200-205ENST00000480835 FAM114A2Q9NRY5 505 aa15.3■□□□□ 0.04
SNRNP200-205ENST00000480835 DNPEPQ9ULA0 475 aa15.3■□□□□ 0.04
SNRNP200-205ENST00000480835 ZNF148Q9UQR1 794 aa15.3■□□□□ 0.04
SNRNP200-205ENST00000480835 CFAP69A5D8W1 941 aa15.29■□□□□ 0.04
SNRNP200-205ENST00000480835 FAM72CH0Y354 149 aa15.29■□□□□ 0.04
SNRNP200-205ENST00000480835 DCLK1O15075 740 aa15.29■□□□□ 0.04
SNRNP200-205ENST00000480835 FGF10O15520 208 aaPredicted RBP15.29■□□□□ 0.04
SNRNP200-205ENST00000480835 COCHO43405 550 aa15.29■□□□□ 0.04
SNRNP200-205ENST00000480835 LRIG2O94898 1065 aa15.29■□□□□ 0.04
SNRNP200-205ENST00000480835 H2AFXP16104 143 aaPredicted RBP15.29■□□□□ 0.04
SNRNP200-205ENST00000480835 PECAM1P16284 738 aaPredicted RBP15.29■□□□□ 0.04
SNRNP200-205ENST00000480835 HOXC13P31276 330 aa15.29■□□□□ 0.04
SNRNP200-205ENST00000480835 MLLT6P55198 1093 aaPredicted RBP15.29■□□□□ 0.04
SNRNP200-205ENST00000480835 VSNL1P62760 191 aa15.29■□□□□ 0.04
SNRNP200-205ENST00000480835 CUL1Q13616 776 aa15.29■□□□□ 0.04
SNRNP200-205ENST00000480835 PTK6Q13882 451 aa15.29■□□□□ 0.04
SNRNP200-205ENST00000480835 PPP1R7Q15435 360 aa15.29■□□□□ 0.04
SNRNP200-205ENST00000480835 MAP9Q49MG5 647 aa15.29■□□□□ 0.04
SNRNP200-205ENST00000480835 FAM72AQ5TYM5 149 aa15.29■□□□□ 0.04
SNRNP200-205ENST00000480835 MANEALQ5VSG8 457 aa15.29■□□□□ 0.04
SNRNP200-205ENST00000480835 NCBP2-AS2Q69YL0 99 aa15.29■□□□□ 0.04
SNRNP200-205ENST00000480835 FAM72DQ6L9T8 149 aa15.29■□□□□ 0.04
SNRNP200-205ENST00000480835 C1orf228Q6PIY5 440 aa15.29■□□□□ 0.04
SNRNP200-205ENST00000480835 FAM72BQ86X60 149 aa15.29■□□□□ 0.04
SNRNP200-205ENST00000480835 TMC8Q8IU68 726 aa15.29■□□□□ 0.04
SNRNP200-205ENST00000480835 TDHQ8IZJ6 230 aa15.29■□□□□ 0.04
SNRNP200-205ENST00000480835 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP15.29■□□□□ 0.04
SNRNP200-205ENST00000480835 AZIN2Q96A70 460 aa15.29■□□□□ 0.04
SNRNP200-205ENST00000480835 HAUS1Q96CS2 278 aa15.29■□□□□ 0.04
SNRNP200-205ENST00000480835 TBC1D31Q96DN5 1066 aa15.29■□□□□ 0.04
SNRNP200-205ENST00000480835 FAM129AQ9BZQ8 928 aa15.29■□□□□ 0.04
SNRNP200-205ENST00000480835 CATSPERBQ9H7T0 1116 aa15.29■□□□□ 0.04
SNRNP200-205ENST00000480835 ASAH2Q9NR71 780 aa15.29■□□□□ 0.04
SNRNP200-205ENST00000480835 ZDHHC7Q9NXF8 308 aa15.29■□□□□ 0.04
SNRNP200-205ENST00000480835 DONSONQ9NYP3 566 aa15.29■□□□□ 0.04
SNRNP200-205ENST00000480835 DOCK4Q8N1I0 1966 aa15.29■□□□□ 0.04
SNRNP200-205ENST00000480835 HACD1B0YJ81 288 aa15.28■□□□□ 0.04
SNRNP200-205ENST00000480835 XYLBO75191 536 aa15.28■□□□□ 0.04
SNRNP200-205ENST00000480835 CSPG5O95196 566 aa15.28■□□□□ 0.04
SNRNP200-205ENST00000480835 MOCS2O96007 188 aaPredicted RBP15.28■□□□□ 0.04
SNRNP200-205ENST00000480835 RBP3P10745 1247 aa15.28■□□□□ 0.04
SNRNP200-205ENST00000480835 PTPN2P17706 415 aa15.28■□□□□ 0.04
SNRNP200-205ENST00000480835 ERCC2P18074 760 aa15.28■□□□□ 0.04
SNRNP200-205ENST00000480835 GABRR2P28476 465 aa15.28■□□□□ 0.04
SNRNP200-205ENST00000480835 STIP1P31948 543 aaKnown RBP15.28■□□□□ 0.04
SNRNP200-205ENST00000480835 SERPINB6P35237 376 aa15.28■□□□□ 0.04
SNRNP200-205ENST00000480835 EPHA5P54756 1037 aa15.28■□□□□ 0.04
SNRNP200-205ENST00000480835 MRPS25P82663 173 aaKnown RBP15.28■□□□□ 0.04
SNRNP200-205ENST00000480835 SMAD3P84022 425 aaKnown RBP15.28■□□□□ 0.04
SNRNP200-205ENST00000480835 DUPD1Q68J44 220 aa15.28■□□□□ 0.04
SNRNP200-205ENST00000480835 TMCO3Q6UWJ1 677 aa15.28■□□□□ 0.04
SNRNP200-205ENST00000480835 NPNTQ6UXI9 565 aa15.28■□□□□ 0.04
SNRNP200-205ENST00000480835 CCNI2Q6ZMN8 369 aaPredicted RBP15.28■□□□□ 0.04
SNRNP200-205ENST00000480835 GSTA5Q7RTV2 222 aa15.28■□□□□ 0.04
SNRNP200-205ENST00000480835 TMEM150AQ86TG1 271 aa15.28■□□□□ 0.04
SNRNP200-205ENST00000480835 CDKL3Q8IVW4 592 aaPredicted RBP15.28■□□□□ 0.04
SNRNP200-205ENST00000480835 ALLCQ8N6M5 410 aa15.28■□□□□ 0.04
SNRNP200-205ENST00000480835 HNRNPLLQ8WVV9 542 aaKnown RBP15.28■□□□□ 0.04
SNRNP200-205ENST00000480835 ARNTL2Q8WYA1 636 aa15.28■□□□□ 0.04
SNRNP200-205ENST00000480835 CDCA3Q99618 268 aaPredicted RBP15.28■□□□□ 0.04
SNRNP200-205ENST00000480835 FAM118BQ9BPY3 351 aa15.28■□□□□ 0.04
SNRNP200-205ENST00000480835 TRIM51Q9BSJ1 452 aa15.28■□□□□ 0.04
SNRNP200-205ENST00000480835 SIK2Q9H0K1 926 aa15.28■□□□□ 0.04
SNRNP200-205ENST00000480835 HS3ST4Q9Y661 456 aa15.28■□□□□ 0.04
SNRNP200-205ENST00000480835 BCLAF3A2AJT9 711 aaKnown RBP15.27■□□□□ 0.04
SNRNP200-205ENST00000480835 SOBPA7XYQ1 873 aa15.27■□□□□ 0.04
SNRNP200-205ENST00000480835 H7C0C1 242 aa15.27■□□□□ 0.04
SNRNP200-205ENST00000480835 NDC80O14777 642 aa15.27■□□□□ 0.04
SNRNP200-205ENST00000480835 NCAM2O15394 837 aa15.27■□□□□ 0.04
SNRNP200-205ENST00000480835 CCL16O15467 120 aa15.27■□□□□ 0.04
SNRNP200-205ENST00000480835 LATS1O95835 1130 aa15.27■□□□□ 0.04
SNRNP200-205ENST00000480835 OLFM2O95897 454 aa15.27■□□□□ 0.04
SNRNP200-205ENST00000480835 EPCAMP16422 314 aa15.27■□□□□ 0.04
SNRNP200-205ENST00000480835 DDX6P26196 483 aaKnown RBP eCLIP15.27■□□□□ 0.04
SNRNP200-205ENST00000480835 EPHB2P29323 1055 aa15.27■□□□□ 0.04
SNRNP200-205ENST00000480835 ATP5OP48047 213 aa15.27■□□□□ 0.04
SNRNP200-205ENST00000480835 SLC11A2P49281 568 aa15.27■□□□□ 0.04
SNRNP200-205ENST00000480835 HARS2P49590 506 aaKnown RBP15.27■□□□□ 0.04
SNRNP200-205ENST00000480835 DUSP6Q16828 381 aa15.27■□□□□ 0.04
SNRNP200-205ENST00000480835 MS4A13Q5J8X5 152 aa15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms