RNA–Protein interactions for RNA: ENST00000480362.5

UPF3A-206, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3A, Length 965 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-206ENST00000480362 RCOR3Q9P2K3 495 aaPredicted RBP18.19■□□□□ 0.5
UPF3A-206ENST00000480362 CPQQ9Y646 472 aa18.19■□□□□ 0.5
UPF3A-206ENST00000480362 HS3ST4Q9Y661 456 aa18.19■□□□□ 0.5
UPF3A-206ENST00000480362 EEF2KO00418 725 aaKnown RBP18.18■□□□□ 0.5
UPF3A-206ENST00000480362 CKMP06732 381 aa18.18■□□□□ 0.5
UPF3A-206ENST00000480362 IRF1P10914 325 aa18.18■□□□□ 0.5
UPF3A-206ENST00000480362 HCAR3P49019 387 aa18.18■□□□□ 0.5
UPF3A-206ENST00000480362 HARS2P49590 506 aaKnown RBP18.18■□□□□ 0.5
UPF3A-206ENST00000480362 ZNF135P52742 658 aaPredicted RBP18.18■□□□□ 0.5
UPF3A-206ENST00000480362 DYNLT1P63172 113 aa18.18■□□□□ 0.5
UPF3A-206ENST00000480362 SLC7A9P82251 487 aa18.18■□□□□ 0.5
UPF3A-206ENST00000480362 ITIH3Q06033 890 aa18.18■□□□□ 0.5
UPF3A-206ENST00000480362 TFDP2Q14188 446 aa18.18■□□□□ 0.5
UPF3A-206ENST00000480362 ADGRE1Q14246 886 aa18.18■□□□□ 0.5
UPF3A-206ENST00000480362 RFX8Q6ZV50 586 aa18.18■□□□□ 0.5
UPF3A-206ENST00000480362 PQLC3Q8N755 202 aa18.18■□□□□ 0.5
UPF3A-206ENST00000480362 TRAF3IP1Q8TDR0 691 aaPredicted RBP18.18■□□□□ 0.5
UPF3A-206ENST00000480362 WBP2Q969T9 261 aa18.18■□□□□ 0.5
UPF3A-206ENST00000480362 ZFRQ96KR1 1074 aaKnown RBP18.18■□□□□ 0.5
UPF3A-206ENST00000480362 C1orf74Q96LT6 269 aa18.18■□□□□ 0.5
UPF3A-206ENST00000480362 EPAS1Q99814 870 aa18.18■□□□□ 0.5
UPF3A-206ENST00000480362 RBM12Q9NTZ6 932 aaKnown RBP18.18■□□□□ 0.5
UPF3A-206ENST00000480362 MRPS23Q9Y3D9 190 aaKnown RBP18.18■□□□□ 0.5
UPF3A-206ENST00000480362 NOTCH4Q99466 2003 aa18.18■□□□□ 0.5
UPF3A-206ENST00000480362 DOCK6Q96HP0 2047 aa18.17■□□□□ 0.5
UPF3A-206ENST00000480362 GOLGA6L10A0A0M3HER8 536 aa18.17■□□□□ 0.5
UPF3A-206ENST00000480362 SOBPA7XYQ1 873 aa18.17■□□□□ 0.5
UPF3A-206ENST00000480362 CCDC188H7C350 402 aa18.17■□□□□ 0.5
UPF3A-206ENST00000480362 APOL1O14791 398 aa18.17■□□□□ 0.5
UPF3A-206ENST00000480362 DAPK3O43293 454 aa18.17■□□□□ 0.5
UPF3A-206ENST00000480362 LRIG2O94898 1065 aa18.17■□□□□ 0.5
UPF3A-206ENST00000480362 KLKB1P03952 638 aa18.17■□□□□ 0.5
UPF3A-206ENST00000480362 POU3F3P20264 500 aaPredicted RBP18.17■□□□□ 0.5
UPF3A-206ENST00000480362 IGFBP4P22692 258 aa18.17■□□□□ 0.5
UPF3A-206ENST00000480362 TPI1P60174 286 aa18.17■□□□□ 0.5
UPF3A-206ENST00000480362 MTA1Q13330 715 aa18.17■□□□□ 0.5
UPF3A-206ENST00000480362 MS4A13Q5J8X5 152 aa18.17■□□□□ 0.5
UPF3A-206ENST00000480362 PIK3R6Q5UE93 754 aa18.17■□□□□ 0.5
UPF3A-206ENST00000480362 PRPF38BQ5VTL8 546 aaKnown RBP18.17■□□□□ 0.5
UPF3A-206ENST00000480362 SYCE2Q6PIF2 218 aa18.17■□□□□ 0.5
UPF3A-206ENST00000480362 GPR149Q86SP6 731 aa18.17■□□□□ 0.5
UPF3A-206ENST00000480362 C14orf80Q86SX3 495 aa18.17■□□□□ 0.5
UPF3A-206ENST00000480362 DENND1CQ8IV53 801 aa18.17■□□□□ 0.5
UPF3A-206ENST00000480362 PRELID2Q8N945 189 aa18.17■□□□□ 0.5
UPF3A-206ENST00000480362 ADAMTS19Q8TE59 1207 aa18.17■□□□□ 0.5
UPF3A-206ENST00000480362 LRCH3Q96II8 777 aa18.17■□□□□ 0.5
UPF3A-206ENST00000480362 ACSL4O60488 711 aa18.16■□□□□ 0.5
UPF3A-206ENST00000480362 CEBPBP17676 345 aa18.16■□□□□ 0.5
UPF3A-206ENST00000480362 CORO1AP31146 461 aaKnown RBP18.16■□□□□ 0.5
UPF3A-206ENST00000480362 SLC11A2P49281 568 aa18.16■□□□□ 0.5
UPF3A-206ENST00000480362 ZXDBP98169 803 aa18.16■□□□□ 0.5
UPF3A-206ENST00000480362 NRG1Q02297 640 aaPredicted RBP18.16■□□□□ 0.5
UPF3A-206ENST00000480362 DPYSQ14117 519 aa18.16■□□□□ 0.5
UPF3A-206ENST00000480362 MANEALQ5VSG8 457 aa18.16■□□□□ 0.5
UPF3A-206ENST00000480362 SLC9A4Q6AI14 798 aa18.16■□□□□ 0.5
UPF3A-206ENST00000480362 KLHL7Q8IXQ5 586 aa18.16■□□□□ 0.5
UPF3A-206ENST00000480362 CMTM8Q8IZV2 173 aa18.16■□□□□ 0.5
UPF3A-206ENST00000480362 ITFG1Q8TB96 612 aa18.16■□□□□ 0.5
UPF3A-206ENST00000480362 C1orf54Q8WWF1 131 aa18.16■□□□□ 0.5
UPF3A-206ENST00000480362 ING5Q8WYH8 240 aa18.16■□□□□ 0.5
UPF3A-206ENST00000480362 AZIN2Q96A70 460 aa18.16■□□□□ 0.5
UPF3A-206ENST00000480362 HAUS1Q96CS2 278 aa18.16■□□□□ 0.5
UPF3A-206ENST00000480362 FAM161BQ96MY7 647 aa18.16■□□□□ 0.5
UPF3A-206ENST00000480362 SMG9Q9H0W8 520 aaKnown RBP18.16■□□□□ 0.5
UPF3A-206ENST00000480362 SLITRK6Q9H5Y7 841 aa18.16■□□□□ 0.5
UPF3A-206ENST00000480362 ARHGEF4Q9NR80 690 aa18.16■□□□□ 0.5
UPF3A-206ENST00000480362 STIM2Q9P246 746 aa18.16■□□□□ 0.5
UPF3A-206ENST00000480362 R3HDM2Q9Y2K5 976 aaKnown RBP18.16■□□□□ 0.5
UPF3A-206ENST00000480362 CHD7Q9P2D1 2997 aa18.16■□□□□ 0.5
UPF3A-206ENST00000480362 LAMA2P24043 3122 aaKnown RBP18.16■□□□□ 0.5
UPF3A-206ENST00000480362 GOLGA6L7A0A1B0GV03 622 aa18.15■□□□□ 0.5
UPF3A-206ENST00000480362 E9PAM4 449 aa18.15■□□□□ 0.5
UPF3A-206ENST00000480362 PHF2O75151 1096 aa18.15■□□□□ 0.5
UPF3A-206ENST00000480362 ZFXP17010 805 aaPredicted RBP18.15■□□□□ 0.5
UPF3A-206ENST00000480362 HOXB8P17481 243 aaPredicted RBP18.15■□□□□ 0.5
UPF3A-206ENST00000480362 ERCC2P18074 760 aa18.15■□□□□ 0.5
UPF3A-206ENST00000480362 EPHB2P29323 1055 aa18.15■□□□□ 0.5
UPF3A-206ENST00000480362 AVPR1AP37288 418 aa18.15■□□□□ 0.5
UPF3A-206ENST00000480362 AUHQ13825 339 aaKnown RBP18.15■□□□□ 0.5
UPF3A-206ENST00000480362 CYP1B1Q16678 543 aa18.15■□□□□ 0.5
UPF3A-206ENST00000480362 ARTNQ5T4W7 220 aa18.15■□□□□ 0.5
UPF3A-206ENST00000480362 ACBD5Q5T8D3 534 aaPredicted RBP18.15■□□□□ 0.5
UPF3A-206ENST00000480362 RAP1GAP2Q684P5 730 aa18.15■□□□□ 0.5
UPF3A-206ENST00000480362 NADSYN1Q6IA69 706 aa18.15■□□□□ 0.5
UPF3A-206ENST00000480362 C1orf228Q6PIY5 440 aa18.15■□□□□ 0.5
UPF3A-206ENST00000480362 MMGT1Q8N4V1 131 aa18.15■□□□□ 0.5
UPF3A-206ENST00000480362 PLD5Q8N7P1 536 aa18.15■□□□□ 0.5
UPF3A-206ENST00000480362 TTC13Q8NBP0 860 aa18.15■□□□□ 0.5
UPF3A-206ENST00000480362 NOA1Q8NC60 698 aaKnown RBP18.15■□□□□ 0.5
UPF3A-206ENST00000480362 MAGOHBQ96A72 148 aaKnown RBP18.15■□□□□ 0.5
UPF3A-206ENST00000480362 TBC1D31Q96DN5 1066 aa18.15■□□□□ 0.5
UPF3A-206ENST00000480362 ZSWIM3Q96MP5 696 aa18.15■□□□□ 0.5
UPF3A-206ENST00000480362 KRT12Q99456 494 aa18.15■□□□□ 0.5
UPF3A-206ENST00000480362 PRMT1Q99873 361 aaKnown RBP18.15■□□□□ 0.5
UPF3A-206ENST00000480362 FAM118BQ9BPY3 351 aa18.15■□□□□ 0.5
UPF3A-206ENST00000480362 DCLK3Q9C098 648 aa18.15■□□□□ 0.5
UPF3A-206ENST00000480362 DDX47Q9H0S4 455 aaKnown RBP18.15■□□□□ 0.5
UPF3A-206ENST00000480362 PRDM16Q9HAZ2 1276 aa18.15■□□□□ 0.5
UPF3A-206ENST00000480362 ETNK2Q9NVF9 386 aa18.15■□□□□ 0.5
UPF3A-206ENST00000480362 CLEC1BQ9P126 229 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms