RNA–Protein interactions for RNA: ENST00000480219.1

SCAMP3-207, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 2

Gene SCAMP3, Length 752 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-207ENST00000480219 ZNF185O15231 689 aa17.43■□□□□ 0.38
SCAMP3-207ENST00000480219 KLKB1P03952 638 aa17.43■□□□□ 0.38
SCAMP3-207ENST00000480219 CKMP06732 381 aa17.43■□□□□ 0.38
SCAMP3-207ENST00000480219 IGFBP4P22692 258 aa17.43■□□□□ 0.38
SCAMP3-207ENST00000480219 GJC1P36383 396 aa17.43■□□□□ 0.38
SCAMP3-207ENST00000480219 CETN2P41208 172 aa17.43■□□□□ 0.38
SCAMP3-207ENST00000480219 MTHFRP42898 656 aa17.43■□□□□ 0.38
SCAMP3-207ENST00000480219 HARS2P49590 506 aaKnown RBP17.43■□□□□ 0.38
SCAMP3-207ENST00000480219 DNA2P51530 1060 aa17.43■□□□□ 0.38
SCAMP3-207ENST00000480219 USP4Q13107 963 aa17.43■□□□□ 0.38
SCAMP3-207ENST00000480219 ZNF211Q13398 564 aaPredicted RBP17.43■□□□□ 0.38
SCAMP3-207ENST00000480219 DNTTIP2Q5QJE6 756 aaKnown RBP17.43■□□□□ 0.38
SCAMP3-207ENST00000480219 ATAT1Q5SQI0 421 aa17.43■□□□□ 0.38
SCAMP3-207ENST00000480219 PIK3R6Q5UE93 754 aa17.43■□□□□ 0.38
SCAMP3-207ENST00000480219 CES5AQ6NT32 575 aa17.43■□□□□ 0.38
SCAMP3-207ENST00000480219 SLC13A5Q86YT5 568 aaPredicted RBP17.43■□□□□ 0.38
SCAMP3-207ENST00000480219 NPAS3Q8IXF0 933 aa17.43■□□□□ 0.38
SCAMP3-207ENST00000480219 SUSD6Q92537 303 aa17.43■□□□□ 0.38
SCAMP3-207ENST00000480219 RNF34Q969K3 372 aa17.43■□□□□ 0.38
SCAMP3-207ENST00000480219 RNF25Q96BH1 459 aaPredicted RBP17.43■□□□□ 0.38
SCAMP3-207ENST00000480219 RIPOR3Q96MK2 946 aa17.43■□□□□ 0.38
SCAMP3-207ENST00000480219 GUCD1Q96NT3 240 aa17.43■□□□□ 0.38
SCAMP3-207ENST00000480219 CSPG4P5Q96PW8 444 aa17.43■□□□□ 0.38
SCAMP3-207ENST00000480219 RNF157Q96PX1 679 aa17.43■□□□□ 0.38
SCAMP3-207ENST00000480219 CDX2Q99626 313 aaPredicted RBP17.43■□□□□ 0.38
SCAMP3-207ENST00000480219 HERPUD2Q9BSE4 406 aa17.43■□□□□ 0.38
SCAMP3-207ENST00000480219 MAGEB5Q9BZ81 275 aa17.43■□□□□ 0.38
SCAMP3-207ENST00000480219 RETREG1Q9H6L5 497 aa17.43■□□□□ 0.38
SCAMP3-207ENST00000480219 KIF9Q9HAQ2 790 aa17.43■□□□□ 0.38
SCAMP3-207ENST00000480219 GKN1Q9NS71 199 aa17.43■□□□□ 0.38
SCAMP3-207ENST00000480219 KLHL11Q9NVR0 708 aa17.43■□□□□ 0.38
SCAMP3-207ENST00000480219 OR12D3Q9UGF7 316 aa17.43■□□□□ 0.38
SCAMP3-207ENST00000480219 ZNF510Q9Y2H8 683 aa17.43■□□□□ 0.38
SCAMP3-207ENST00000480219 HS3ST4Q9Y661 456 aa17.43■□□□□ 0.38
SCAMP3-207ENST00000480219 PI4K2BG5E9Z4 385 aa17.42■□□□□ 0.38
SCAMP3-207ENST00000480219 FAM72CH0Y354 149 aa17.42■□□□□ 0.38
SCAMP3-207ENST00000480219 PGRMC1O00264 195 aaKnown RBP17.42■□□□□ 0.38
SCAMP3-207ENST00000480219 CEP104O60308 925 aa17.42■□□□□ 0.38
SCAMP3-207ENST00000480219 ACSL4O60488 711 aa17.42■□□□□ 0.38
SCAMP3-207ENST00000480219 AVPR1AP37288 418 aa17.42■□□□□ 0.38
SCAMP3-207ENST00000480219 DPYSQ14117 519 aa17.42■□□□□ 0.38
SCAMP3-207ENST00000480219 KRT81Q14533 505 aa17.42■□□□□ 0.38
SCAMP3-207ENST00000480219 ZNF77Q15935 545 aa17.42■□□□□ 0.38
SCAMP3-207ENST00000480219 FAM133BQ5BKY9 247 aaKnown RBP17.42■□□□□ 0.38
SCAMP3-207ENST00000480219 MS4A13Q5J8X5 152 aa17.42■□□□□ 0.38
SCAMP3-207ENST00000480219 FAM72AQ5TYM5 149 aa17.42■□□□□ 0.38
SCAMP3-207ENST00000480219 SLC9A4Q6AI14 798 aa17.42■□□□□ 0.38
SCAMP3-207ENST00000480219 FAM72DQ6L9T8 149 aa17.42■□□□□ 0.38
SCAMP3-207ENST00000480219 AADACL2Q6P093 401 aa17.42■□□□□ 0.38
SCAMP3-207ENST00000480219 BBS12Q6ZW61 710 aa17.42■□□□□ 0.38
SCAMP3-207ENST00000480219 FAM72BQ86X60 149 aa17.42■□□□□ 0.38
SCAMP3-207ENST00000480219 PYROXD2Q8N2H3 581 aa17.42■□□□□ 0.38
SCAMP3-207ENST00000480219 USP13Q92995 863 aaPredicted RBP17.42■□□□□ 0.38
SCAMP3-207ENST00000480219 WBP2Q969T9 261 aa17.42■□□□□ 0.38
SCAMP3-207ENST00000480219 ZSWIM3Q96MP5 696 aa17.42■□□□□ 0.38
SCAMP3-207ENST00000480219 FAM161BQ96MY7 647 aa17.42■□□□□ 0.38
SCAMP3-207ENST00000480219 NECTIN4Q96NY8 510 aa17.42■□□□□ 0.38
SCAMP3-207ENST00000480219 NAP1L3Q99457 506 aaPredicted RBP17.42■□□□□ 0.38
SCAMP3-207ENST00000480219 EPAS1Q99814 870 aa17.42■□□□□ 0.38
SCAMP3-207ENST00000480219 TDP1Q9NUW8 608 aa17.42■□□□□ 0.38
SCAMP3-207ENST00000480219 CWC15Q9P013 229 aaKnown RBP17.42■□□□□ 0.38
SCAMP3-207ENST00000480219 PPARGC1AQ9UBK2 798 aaKnown RBP17.42■□□□□ 0.38
SCAMP3-207ENST00000480219 XPO7Q9UIA9 1087 aaKnown RBP17.42■□□□□ 0.38
SCAMP3-207ENST00000480219 E2F8A0AVK6 867 aa17.41■□□□□ 0.38
SCAMP3-207ENST00000480219 DRGXA6NNA5 263 aa17.41■□□□□ 0.38
SCAMP3-207ENST00000480219 WASH4PA8MWX3 477 aa17.41■□□□□ 0.38
SCAMP3-207ENST00000480219 H3BRJ5 948 aa17.41■□□□□ 0.38
SCAMP3-207ENST00000480219 LEFTY2O00292 366 aa17.41■□□□□ 0.38
SCAMP3-207ENST00000480219 PDE2AO00408 941 aaPredicted RBP17.41■□□□□ 0.38
SCAMP3-207ENST00000480219 LRIG2O94898 1065 aa17.41■□□□□ 0.38
SCAMP3-207ENST00000480219 CORO1AP31146 461 aaKnown RBP17.41■□□□□ 0.38
SCAMP3-207ENST00000480219 SLC11A2P49281 568 aa17.41■□□□□ 0.38
SCAMP3-207ENST00000480219 SIX1Q15475 284 aaPredicted RBP17.41■□□□□ 0.38
SCAMP3-207ENST00000480219 ANKRD20A8PQ5CZ79 823 aa17.41■□□□□ 0.38
SCAMP3-207ENST00000480219 NADSYN1Q6IA69 706 aa17.41■□□□□ 0.38
SCAMP3-207ENST00000480219 PQLC3Q8N755 202 aa17.41■□□□□ 0.38
SCAMP3-207ENST00000480219 PCDH19Q8TAB3 1148 aa17.41■□□□□ 0.38
SCAMP3-207ENST00000480219 MAIP1Q8WWC4 291 aa17.41■□□□□ 0.38
SCAMP3-207ENST00000480219 MYLIPQ8WY64 445 aa17.41■□□□□ 0.38
SCAMP3-207ENST00000480219 FGF13Q92913 245 aa17.41■□□□□ 0.38
SCAMP3-207ENST00000480219 MS4A14Q96JA4 679 aa17.41■□□□□ 0.38
SCAMP3-207ENST00000480219 OBP2AQ9NY56 170 aa17.41■□□□□ 0.38
SCAMP3-207ENST00000480219 AGO1Q9UL18 857 aaKnown RBP17.41■□□□□ 0.38
SCAMP3-207ENST00000480219 ZFP37Q9Y6Q3 630 aaPredicted RBP17.41■□□□□ 0.38
SCAMP3-207ENST00000480219 PRAMEF12O95522 483 aa17.4■□□□□ 0.38
SCAMP3-207ENST00000480219 FGGP02679 453 aa17.4■□□□□ 0.38
SCAMP3-207ENST00000480219 HMBSP08397 361 aa17.4■□□□□ 0.38
SCAMP3-207ENST00000480219 GOT1P17174 413 aa17.4■□□□□ 0.38
SCAMP3-207ENST00000480219 ARL4AP40617 200 aa17.4■□□□□ 0.38
SCAMP3-207ENST00000480219 CKAP4Q07065 602 aaKnown RBP17.4■□□□□ 0.38
SCAMP3-207ENST00000480219 ADCY2Q08462 1091 aa17.4■□□□□ 0.38
SCAMP3-207ENST00000480219 MMRN1Q13201 1228 aa17.4■□□□□ 0.38
SCAMP3-207ENST00000480219 AUHQ13825 339 aaKnown RBP17.4■□□□□ 0.38
SCAMP3-207ENST00000480219 TFDP2Q14188 446 aa17.4■□□□□ 0.38
SCAMP3-207ENST00000480219 ODF2Q5BJF6 829 aa17.4■□□□□ 0.38
SCAMP3-207ENST00000480219 ADGRF1Q5T601 910 aa17.4■□□□□ 0.38
SCAMP3-207ENST00000480219 RFX8Q6ZV50 586 aa17.4■□□□□ 0.38
SCAMP3-207ENST00000480219 ARID3BQ8IVW6 561 aaPredicted RBP17.4■□□□□ 0.38
SCAMP3-207ENST00000480219 ZDHHC14Q8IZN3 488 aa17.4■□□□□ 0.38
SCAMP3-207ENST00000480219 CPXM2Q8N436 756 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms