RNA–Protein interactions for RNA: ENST00000480139.5

LIME1-205, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene LIME1, Length 819 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-205ENST00000480139 UVRAGQ9P2Y5 699 aa20.46■□□□□ 0.87
LIME1-205ENST00000480139 MIA3Q5JRA6 1907 aa20.46■□□□□ 0.87
LIME1-205ENST00000480139 PRR33A8MZF0 331 aa20.45■□□□□ 0.86
LIME1-205ENST00000480139 PALM2-AKAP2B1ALY0 433 aaPredicted RBP20.45■□□□□ 0.86
LIME1-205ENST00000480139 EIF3CLB5ME19 914 aaKnown RBP20.45■□□□□ 0.86
LIME1-205ENST00000480139 NEDD8-MDP1E9PL57 170 aa20.45■□□□□ 0.86
LIME1-205ENST00000480139 PAGE1O75459 146 aa20.45■□□□□ 0.86
LIME1-205ENST00000480139 TYRP14679 529 aa20.45■□□□□ 0.86
LIME1-205ENST00000480139 SLC6A4P31645 630 aa20.45■□□□□ 0.86
LIME1-205ENST00000480139 ATXN1P54253 815 aaKnown RBP20.45■□□□□ 0.86
LIME1-205ENST00000480139 ZNF252P-AS1Q0IIN9 211 aa20.45■□□□□ 0.86
LIME1-205ENST00000480139 ACAP1Q15027 740 aa20.45■□□□□ 0.86
LIME1-205ENST00000480139 MS4A13Q5J8X5 152 aa20.45■□□□□ 0.86
LIME1-205ENST00000480139 SH3PXD2AQ5TCZ1 1133 aa20.45■□□□□ 0.86
LIME1-205ENST00000480139 PIK3R6Q5UE93 754 aa20.45■□□□□ 0.86
LIME1-205ENST00000480139 RNF43Q68DV7 783 aa20.45■□□□□ 0.86
LIME1-205ENST00000480139 CWF19L1Q69YN2 538 aaKnown RBP20.45■□□□□ 0.86
LIME1-205ENST00000480139 FAM131BQ86XD5 332 aa20.45■□□□□ 0.86
LIME1-205ENST00000480139 PJA1Q8NG27 643 aa20.45■□□□□ 0.86
LIME1-205ENST00000480139 CD101Q93033 1021 aa20.45■□□□□ 0.86
LIME1-205ENST00000480139 NTAN1Q96AB6 310 aa20.45■□□□□ 0.86
LIME1-205ENST00000480139 PBXIP1Q96AQ6 731 aa20.45■□□□□ 0.86
LIME1-205ENST00000480139 C1orf74Q96LT6 269 aa20.45■□□□□ 0.86
LIME1-205ENST00000480139 XPO6Q96QU8 1125 aaKnown RBP20.45■□□□□ 0.86
LIME1-205ENST00000480139 HAPLN3Q96S86 360 aa20.45■□□□□ 0.86
LIME1-205ENST00000480139 EIF3CQ99613 913 aaKnown RBP20.45■□□□□ 0.86
LIME1-205ENST00000480139 P2RY13Q9BPV8 354 aa20.45■□□□□ 0.86
LIME1-205ENST00000480139 NCAPGQ9BPX3 1015 aa20.45■□□□□ 0.86
LIME1-205ENST00000480139 NUP85Q9BW27 656 aa20.45■□□□□ 0.86
LIME1-205ENST00000480139 XPO7Q9UIA9 1087 aaKnown RBP20.45■□□□□ 0.86
LIME1-205ENST00000480139 LCMT1Q9UIC8 334 aa20.45■□□□□ 0.86
LIME1-205ENST00000480139 EPN1Q9Y6I3 576 aaPredicted RBP20.45■□□□□ 0.86
LIME1-205ENST00000480139 GOLGA6L7A0A1B0GV03 622 aa20.44■□□□□ 0.86
LIME1-205ENST00000480139 SOWAHDA6NJG2 315 aa20.44■□□□□ 0.86
LIME1-205ENST00000480139 NDUFA10O95299 355 aa20.44■□□□□ 0.86
LIME1-205ENST00000480139 PDGFBP01127 241 aaPredicted RBP20.44■□□□□ 0.86
LIME1-205ENST00000480139 TACR2P21452 398 aa20.44■□□□□ 0.86
LIME1-205ENST00000480139 CD72P21854 359 aa20.44■□□□□ 0.86
LIME1-205ENST00000480139 PSMA2P25787 234 aa20.44■□□□□ 0.86
LIME1-205ENST00000480139 CLCN5P51795 746 aa20.44■□□□□ 0.86
LIME1-205ENST00000480139 AIF1P55008 147 aa20.44■□□□□ 0.86
LIME1-205ENST00000480139 ARL13BQ3SXY8 428 aa20.44■□□□□ 0.86
LIME1-205ENST00000480139 PREPLQ4J6C6 727 aaPredicted RBP20.44■□□□□ 0.86
LIME1-205ENST00000480139 TMEM196Q5HYL7 178 aa20.44■□□□□ 0.86
LIME1-205ENST00000480139 FBXL6Q8N531 539 aa20.44■□□□□ 0.86
LIME1-205ENST00000480139 TMA16Q96EY4 203 aaKnown RBP20.44■□□□□ 0.86
LIME1-205ENST00000480139 SLC2A11Q9BYW1 496 aa20.44■□□□□ 0.86
LIME1-205ENST00000480139 TRIM7Q9C029 511 aa20.44■□□□□ 0.86
LIME1-205ENST00000480139 LUC7LQ9NQ29 371 aaKnown RBP20.44■□□□□ 0.86
LIME1-205ENST00000480139 FBXO10Q9UK96 956 aa20.44■□□□□ 0.86
LIME1-205ENST00000480139 TYW5A2RUC4 315 aaKnown RBP20.43■□□□□ 0.86
LIME1-205ENST00000480139 F5H5T6 163 aa20.43■□□□□ 0.86
LIME1-205ENST00000480139 I6L893 689 aaPredicted RBP20.43■□□□□ 0.86
LIME1-205ENST00000480139 AOC1P19801 751 aa20.43■□□□□ 0.86
LIME1-205ENST00000480139 DRD1P21728 446 aa20.43■□□□□ 0.86
LIME1-205ENST00000480139 TARSP26639 723 aaKnown RBP20.43■□□□□ 0.86
LIME1-205ENST00000480139 HOXD9P28356 352 aaPredicted RBP20.43■□□□□ 0.86
LIME1-205ENST00000480139 GALK1P51570 392 aa20.43■□□□□ 0.86
LIME1-205ENST00000480139 GRSF1Q12849 480 aaKnown RBP eCLIP20.43■□□□□ 0.86
LIME1-205ENST00000480139 PON2Q15165 354 aa20.43■□□□□ 0.86
LIME1-205ENST00000480139 TCEAL1Q15170 157 aa20.43■□□□□ 0.86
LIME1-205ENST00000480139 SPA17Q15506 151 aa20.43■□□□□ 0.86
LIME1-205ENST00000480139 TMEM31Q5JXX7 168 aa20.43■□□□□ 0.86
LIME1-205ENST00000480139 TTC39BQ5VTQ0 682 aaPredicted RBP20.43■□□□□ 0.86
LIME1-205ENST00000480139 RAP1GAP2Q684P5 730 aa20.43■□□□□ 0.86
LIME1-205ENST00000480139 RFWD3Q6PCD5 774 aa20.43■□□□□ 0.86
LIME1-205ENST00000480139 C12orf40Q86WS4 652 aa20.43■□□□□ 0.86
LIME1-205ENST00000480139 CHSY1Q86X52 802 aa20.43■□□□□ 0.86
LIME1-205ENST00000480139 NIPA2Q8N8Q9 360 aa20.43■□□□□ 0.86
LIME1-205ENST00000480139 ZNF557Q8N988 423 aaPredicted RBP20.43■□□□□ 0.86
LIME1-205ENST00000480139 HJURPQ8NCD3 748 aaPredicted RBP20.43■□□□□ 0.86
LIME1-205ENST00000480139 FLCNQ8NFG4 579 aa20.43■□□□□ 0.86
LIME1-205ENST00000480139 DDI1Q8WTU0 396 aa20.43■□□□□ 0.86
LIME1-205ENST00000480139 P2RY11Q96G91 374 aa20.43■□□□□ 0.86
LIME1-205ENST00000480139 PRICKLE1Q96MT3 831 aaPredicted RBP20.43■□□□□ 0.86
LIME1-205ENST00000480139 PNKPQ96T60 521 aa20.43■□□□□ 0.86
LIME1-205ENST00000480139 FOXQ1Q9C009 403 aa20.43■□□□□ 0.86
LIME1-205ENST00000480139 ANLNQ9NQW6 1124 aa20.43■□□□□ 0.86
LIME1-205ENST00000480139 HS3ST4Q9Y661 456 aa20.43■□□□□ 0.86
LIME1-205ENST00000480139 A0A0A0MRY4 1105 aa20.42■□□□□ 0.86
LIME1-205ENST00000480139 NCAM2O15394 837 aa20.42■□□□□ 0.86
LIME1-205ENST00000480139 TULP3O75386 442 aa20.42■□□□□ 0.86
LIME1-205ENST00000480139 RNF8O76064 485 aa20.42■□□□□ 0.86
LIME1-205ENST00000480139 IPO7O95373 1038 aaKnown RBP20.42■□□□□ 0.86
LIME1-205ENST00000480139 ADRA1BP35368 520 aa20.42■□□□□ 0.86
LIME1-205ENST00000480139 NRG1Q02297 640 aaPredicted RBP20.42■□□□□ 0.86
LIME1-205ENST00000480139 SCAPQ12770 1279 aa20.42■□□□□ 0.86
LIME1-205ENST00000480139 CCINQ13939 588 aa20.42■□□□□ 0.86
LIME1-205ENST00000480139 PIGHQ14442 188 aaPredicted RBP20.42■□□□□ 0.86
LIME1-205ENST00000480139 GSE1Q14687 1217 aa20.42■□□□□ 0.86
LIME1-205ENST00000480139 UBXN2BQ14CS0 331 aa20.42■□□□□ 0.86
LIME1-205ENST00000480139 C5orf22Q49AR2 442 aa20.42■□□□□ 0.86
LIME1-205ENST00000480139 RAB6CQ53S08 254 aa20.42■□□□□ 0.86
LIME1-205ENST00000480139 ASTLQ6HA08 431 aaPredicted RBP20.42■□□□□ 0.86
LIME1-205ENST00000480139 RAD9BQ6WBX8 426 aa20.42■□□□□ 0.86
LIME1-205ENST00000480139 RHOT2Q8IXI1 618 aa20.42■□□□□ 0.86
LIME1-205ENST00000480139 CCDC105Q8IYK2 499 aa20.42■□□□□ 0.86
LIME1-205ENST00000480139 PHTF2Q8N3S3 785 aa20.42■□□□□ 0.86
LIME1-205ENST00000480139 ZNF564Q8TBZ8 553 aaPredicted RBP20.42■□□□□ 0.86
LIME1-205ENST00000480139 CLDN23Q96B33 292 aa20.42■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms