RNA–Protein interactions for RNA: ENST00000480057.1

VTI1A-204, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-204ENST00000480057 RNF34Q969K3 372 aa11.38□□□□□ -0.59
VTI1A-204ENST00000480057 SLC39A13Q96H72 371 aa11.38□□□□□ -0.59
VTI1A-204ENST00000480057 B3GALT6Q96L58 329 aa11.38□□□□□ -0.59
VTI1A-204ENST00000480057 PGLYRP2Q96PD5 576 aa11.38□□□□□ -0.59
VTI1A-204ENST00000480057 VN1R3Q9BXE9 311 aa11.38□□□□□ -0.59
VTI1A-204ENST00000480057 UBE2OQ9C0C9 1292 aaKnown RBP11.38□□□□□ -0.59
VTI1A-204ENST00000480057 KLC2Q9H0B6 622 aa11.38□□□□□ -0.59
VTI1A-204ENST00000480057 CDC42EP4Q9H3Q1 356 aaKnown RBP11.38□□□□□ -0.59
VTI1A-204ENST00000480057 SEMA4AQ9H3S1 761 aa11.38□□□□□ -0.59
VTI1A-204ENST00000480057 PPCSQ9HAB8 311 aa11.38□□□□□ -0.59
VTI1A-204ENST00000480057 ANLNQ9NQW6 1124 aa11.38□□□□□ -0.59
VTI1A-204ENST00000480057 COX16Q9P0S2 106 aa11.38□□□□□ -0.59
VTI1A-204ENST00000480057 OR12D3Q9UGF7 316 aa11.38□□□□□ -0.59
VTI1A-204ENST00000480057 CDY1Q9Y6F8 540 aa11.38□□□□□ -0.59
VTI1A-204ENST00000480057 GREB1Q4ZG55 1949 aa11.38□□□□□ -0.59
VTI1A-204ENST00000480057 DNAH12Q6ZR08 3092 aa11.38□□□□□ -0.59
VTI1A-204ENST00000480057 CENPFP49454 3210 aa11.37□□□□□ -0.59
VTI1A-204ENST00000480057 A0A0A0MRY4 1105 aa11.37□□□□□ -0.59
VTI1A-204ENST00000480057 WDR27A2RRH5 827 aa11.37□□□□□ -0.59
VTI1A-204ENST00000480057 GOLGA6CA6NDK9 693 aa11.37□□□□□ -0.59
VTI1A-204ENST00000480057 SLC38A8A6NNN8 435 aa11.37□□□□□ -0.59
VTI1A-204ENST00000480057 A6NNZ2 444 aa11.37□□□□□ -0.59
VTI1A-204ENST00000480057 I6L893 689 aaPredicted RBP11.37□□□□□ -0.59
VTI1A-204ENST00000480057 ALOX15BO15296 676 aa11.37□□□□□ -0.59
VTI1A-204ENST00000480057 MFSD11O43934 449 aa11.37□□□□□ -0.59
VTI1A-204ENST00000480057 URODP06132 367 aa11.37□□□□□ -0.59
VTI1A-204ENST00000480057 GOLGA6DP0CG33 693 aa11.37□□□□□ -0.59
VTI1A-204ENST00000480057 HSPA1AP0DMV8 641 aaKnown RBP11.37□□□□□ -0.59
VTI1A-204ENST00000480057 HSPA1BP0DMV9 641 aaKnown RBP11.37□□□□□ -0.59
VTI1A-204ENST00000480057 FDFT1P37268 417 aa11.37□□□□□ -0.59
VTI1A-204ENST00000480057 PBX3P40426 434 aa11.37□□□□□ -0.59
VTI1A-204ENST00000480057 GPR15P49685 360 aa11.37□□□□□ -0.59
VTI1A-204ENST00000480057 CDR1P51861 262 aa11.37□□□□□ -0.59
VTI1A-204ENST00000480057 ARL4CP56559 192 aa11.37□□□□□ -0.59
VTI1A-204ENST00000480057 HTRA4P83105 476 aaPredicted RBP11.37□□□□□ -0.59
VTI1A-204ENST00000480057 RING1Q06587 406 aa11.37□□□□□ -0.59
VTI1A-204ENST00000480057 IFFO1Q0D2I5 559 aa11.37□□□□□ -0.59
VTI1A-204ENST00000480057 IFRD2Q12894 506 aaPredicted RBP11.37□□□□□ -0.59
VTI1A-204ENST00000480057 DUSP4Q13115 394 aa11.37□□□□□ -0.59
VTI1A-204ENST00000480057 RAB33AQ14088 237 aa11.37□□□□□ -0.59
VTI1A-204ENST00000480057 SLC29A2Q14542 456 aa11.37□□□□□ -0.59
VTI1A-204ENST00000480057 TRIP4Q15650 581 aaPredicted RBP11.37□□□□□ -0.59
VTI1A-204ENST00000480057 TUBB8Q3ZCM7 444 aa11.37□□□□□ -0.59
VTI1A-204ENST00000480057 MANEALQ5VSG8 457 aa11.37□□□□□ -0.59
VTI1A-204ENST00000480057 PRUNE1Q86TP1 453 aa11.37□□□□□ -0.59
VTI1A-204ENST00000480057 CCDC25Q86WR0 208 aa11.37□□□□□ -0.59
VTI1A-204ENST00000480057 LZTR1Q8N653 840 aa11.37□□□□□ -0.59
VTI1A-204ENST00000480057 TTC9BQ8N6N2 239 aa11.37□□□□□ -0.59
VTI1A-204ENST00000480057 HTR3CQ8WXA8 447 aa11.37□□□□□ -0.59
VTI1A-204ENST00000480057 PGM2Q96G03 612 aa11.37□□□□□ -0.59
VTI1A-204ENST00000480057 ATP6V1G3Q96LB4 118 aa11.37□□□□□ -0.59
VTI1A-204ENST00000480057 SPATA13Q96N96 652 aa11.37□□□□□ -0.59
VTI1A-204ENST00000480057 RBM15Q96T37 977 aaKnown RBP eCLIP11.37□□□□□ -0.59
VTI1A-204ENST00000480057 YME1L1Q96TA2 773 aa11.37□□□□□ -0.59
VTI1A-204ENST00000480057 SEPT5Q99719 369 aaPredicted RBP11.37□□□□□ -0.59
VTI1A-204ENST00000480057 STMN4Q9H169 189 aaPredicted RBP11.37□□□□□ -0.59
VTI1A-204ENST00000480057 CATSPERBQ9H7T0 1116 aa11.37□□□□□ -0.59
VTI1A-204ENST00000480057 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.37□□□□□ -0.59
VTI1A-204ENST00000480057 GOLGA6AQ9NYA3 693 aa11.37□□□□□ -0.59
VTI1A-204ENST00000480057 DONSONQ9NYP3 566 aa11.37□□□□□ -0.59
VTI1A-204ENST00000480057 NINJ2Q9NZG7 142 aa11.37□□□□□ -0.59
VTI1A-204ENST00000480057 GMIPQ9P107 970 aa11.37□□□□□ -0.59
VTI1A-204ENST00000480057 VPS18Q9P253 973 aa11.37□□□□□ -0.59
VTI1A-204ENST00000480057 MRPL42Q9Y6G3 142 aaKnown RBP11.37□□□□□ -0.59
VTI1A-204ENST00000480057 WASH4PA8MWX3 477 aa11.36□□□□□ -0.59
VTI1A-204ENST00000480057 OPHN1O60890 802 aa11.36□□□□□ -0.59
VTI1A-204ENST00000480057 LRIG2O94898 1065 aa11.36□□□□□ -0.59
VTI1A-204ENST00000480057 IGLV3-27P01718 113 aa11.36□□□□□ -0.59
VTI1A-204ENST00000480057 APOEP02649 317 aa11.36□□□□□ -0.59
VTI1A-204ENST00000480057 FGBP02675 491 aa11.36□□□□□ -0.59
VTI1A-204ENST00000480057 IVLP07476 585 aa11.36□□□□□ -0.59
VTI1A-204ENST00000480057 CSH1P0DML2 217 aa11.36□□□□□ -0.59
VTI1A-204ENST00000480057 CSH2P0DML3 217 aa11.36□□□□□ -0.59
VTI1A-204ENST00000480057 ATF6P18850 670 aa11.36□□□□□ -0.59
VTI1A-204ENST00000480057 TPSB2P20231 275 aa11.36□□□□□ -0.59
VTI1A-204ENST00000480057 OR1D2P34982 312 aa11.36□□□□□ -0.59
VTI1A-204ENST00000480057 MAGEA4P43358 317 aa11.36□□□□□ -0.59
VTI1A-204ENST00000480057 PPP3CCP48454 512 aa11.36□□□□□ -0.59
VTI1A-204ENST00000480057 TBX4P57082 545 aa11.36□□□□□ -0.59
VTI1A-204ENST00000480057 USP46P62068 366 aa11.36□□□□□ -0.59
VTI1A-204ENST00000480057 COG7P83436 770 aa11.36□□□□□ -0.59
VTI1A-204ENST00000480057 CDK16Q00536 496 aa11.36□□□□□ -0.59
VTI1A-204ENST00000480057 PPIDQ08752 370 aaKnown RBP11.36□□□□□ -0.59
VTI1A-204ENST00000480057 GALNT2Q10471 571 aa11.36□□□□□ -0.59
VTI1A-204ENST00000480057 TAF10Q12962 218 aa11.36□□□□□ -0.59
VTI1A-204ENST00000480057 KCNJ11Q14654 390 aa11.36□□□□□ -0.59
VTI1A-204ENST00000480057 STAT4Q14765 748 aa11.36□□□□□ -0.59
VTI1A-204ENST00000480057 TPSAB1Q15661 275 aa11.36□□□□□ -0.59
VTI1A-204ENST00000480057 HIF1AQ16665 826 aa11.36□□□□□ -0.59
VTI1A-204ENST00000480057 TTMPQ5BVD1 217 aa11.36□□□□□ -0.59
VTI1A-204ENST00000480057 C6orf118Q5T5N4 469 aa11.36□□□□□ -0.59
VTI1A-204ENST00000480057 KLHDC10Q6PID8 442 aa11.36□□□□□ -0.59
VTI1A-204ENST00000480057 LRRC49Q8IUZ0 686 aa11.36□□□□□ -0.59
VTI1A-204ENST00000480057 ATP6V0D2Q8N8Y2 350 aa11.36□□□□□ -0.59
VTI1A-204ENST00000480057 MCUQ8NE86 351 aa11.36□□□□□ -0.59
VTI1A-204ENST00000480057 FAM76AQ8TAV0 307 aa11.36□□□□□ -0.59
VTI1A-204ENST00000480057 EXOC4Q96A65 974 aa11.36□□□□□ -0.59
VTI1A-204ENST00000480057 ARL8AQ96BM9 186 aa11.36□□□□□ -0.59
VTI1A-204ENST00000480057 HDAC11Q96DB2 347 aa11.36□□□□□ -0.59
VTI1A-204ENST00000480057 TBC1D31Q96DN5 1066 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms